| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is yveL [H]
Identifier: 78223235
GI number: 78223235
Start: 2269313
End: 2270164
Strand: Reverse
Name: yveL [H]
Synonym: Gmet_2028
Alternate gene names: 78223235
Gene position: 2270164-2269313 (Counterclockwise)
Preceding gene: 78223236
Following gene: 78223234
Centisome position: 56.79
GC content: 56.69
Gene sequence:
>852_bases ATGAGCAGGATAGAGAGCATCCTTGAAAAAGCTGCGAAAATGCGGCAGGACAAGACCCCGGGGGAGAGCAGGGTTTTGGT GGAACAGCGGGAAGTGCCCAGGGCGGTTATCGAGCCTGAGGTGTTTCAGCCCGACACCAGGATTGCAGTGGACAACCCCT ATCTGGTTACGATCAGCGAACCCCGTTCGCCGGTCACGGAAGAGTATCGCAAACTCAAGTCGATCATCCTCAAACTGACA AATTCGGGTCAGTTCAAGAACACCATCATGGTCACCAGCGCCGTAAGCGGCGAAGGGAAGACCATCACCTCCATCAACCT GGCGGTGGCCCTGGCCCAGGAGTTCGACCACACGGTGCTTCTGGTCGATGCCGACCTGCGCCGTCCCGGCACCAGCAGCT ATCTCGGCATCAGGGCCGAAGTGGGCCTGAGCGACTGTCTGTACGGCAAGGTCGATGTAAAAGACGCCCTGGTTAAAACG GGAATAGGGAAGCTCGTGGTACTCCCCGCCGGCAGCAGGGTGGAGAACCCGGTGGAACTTCTCTCTTCCGGTCGGATGCA AAGCTTCATTGCCGAAATAAAGAACCGCTACCCCGACCGATATATCATCATCGACACGCCGCCGCTCCTTTCCTTTGCGG AAACCTACTCCCTGGCCAATATGGTCGACGGGGTCGTGTTCGTGGTGAAAGAGGGGGGCGCCACCATGAGCAACGTCAAG GACGCCCTCGGTCATCTCAAGAAGGAAAAGGTCTACGGCGTTGTCTATAACAACGTCGGCATCAACCGGTTCGACGAGAA CTACCGGTACCGCAATTACTACGCATACTACAAGGATAATGGTGCCCAATGA
Upstream 100 bases:
>100_bases TGGGATTGACTCTGATCGAGAAGGTCCTCACCAAACTGGGGCTTGATCAGTTCATCATGAGCTGATACCGCAACGACGCA GAGAAAGGAACATAGTACCT
Downstream 100 bases:
>100_bases GAAAAGTGGTCATGGGTGGAATGCTTATGTCATGTTGCGTGGCAGCCACTGCCCACGCGGAGTTCAAGTTGACGCCGAGC CTGATTATCCGCGAGGAGTA
Product: polysaccharide biosynthesis protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 283; Mature: 282
Protein sequence:
>283_residues MSRIESILEKAAKMRQDKTPGESRVLVEQREVPRAVIEPEVFQPDTRIAVDNPYLVTISEPRSPVTEEYRKLKSIILKLT NSGQFKNTIMVTSAVSGEGKTITSINLAVALAQEFDHTVLLVDADLRRPGTSSYLGIRAEVGLSDCLYGKVDVKDALVKT GIGKLVVLPAGSRVENPVELLSSGRMQSFIAEIKNRYPDRYIIIDTPPLLSFAETYSLANMVDGVVFVVKEGGATMSNVK DALGHLKKEKVYGVVYNNVGINRFDENYRYRNYYAYYKDNGAQ
Sequences:
>Translated_283_residues MSRIESILEKAAKMRQDKTPGESRVLVEQREVPRAVIEPEVFQPDTRIAVDNPYLVTISEPRSPVTEEYRKLKSIILKLT NSGQFKNTIMVTSAVSGEGKTITSINLAVALAQEFDHTVLLVDADLRRPGTSSYLGIRAEVGLSDCLYGKVDVKDALVKT GIGKLVVLPAGSRVENPVELLSSGRMQSFIAEIKNRYPDRYIIIDTPPLLSFAETYSLANMVDGVVFVVKEGGATMSNVK DALGHLKKEKVYGVVYNNVGINRFDENYRYRNYYAYYKDNGAQ >Mature_282_residues SRIESILEKAAKMRQDKTPGESRVLVEQREVPRAVIEPEVFQPDTRIAVDNPYLVTISEPRSPVTEEYRKLKSIILKLTN SGQFKNTIMVTSAVSGEGKTITSINLAVALAQEFDHTVLLVDADLRRPGTSSYLGIRAEVGLSDCLYGKVDVKDALVKTG IGKLVVLPAGSRVENPVELLSSGRMQSFIAEIKNRYPDRYIIIDTPPLLSFAETYSLANMVDGVVFVVKEGGATMSNVKD ALGHLKKEKVYGVVYNNVGINRFDENYRYRNYYAYYKDNGAQ
Specific function: Required For The Extracellular Polysaccharide Colanic Acid Synthesis. The Autophosphorylated Form Is Inactive. Probably Involved In The Export Of Colanic Acid From The Cell To Medium. [C]
COG id: COG0489
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Inner membrane (Probable) [C]
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CpsD/CapB family [H]
Homologues:
Organism=Escherichia coli, GI87082032, Length=232, Percent_Identity=30.6034482758621, Blast_Score=87, Evalue=2e-18, Organism=Escherichia coli, GI1787216, Length=221, Percent_Identity=28.5067873303167, Blast_Score=85, Evalue=7e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002586 - InterPro: IPR005702 [H]
Pfam domain/function: PF01656 CbiA [H]
EC number: =2.7.10.2 [H]
Molecular weight: Translated: 31492; Mature: 31360
Theoretical pI: Translated: 8.74; Mature: 8.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRIESILEKAAKMRQDKTPGESRVLVEQREVPRAVIEPEVFQPDTRIAVDNPYLVTISE CHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHCCHHHCCCCCCCCCCEEEECCCEEEEECC PRSPVTEEYRKLKSIILKLTNSGQFKNTIMVTSAVSGEGKTITSINLAVALAQEFDHTVL CCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCEEEEHHHHHEEHHHCCCEEE LVDADLRRPGTSSYLGIRAEVGLSDCLYGKVDVKDALVKTGIGKLVVLPAGSRVENPVEL EEECCCCCCCCCCEEEEEEECCCHHHCCCCCCHHHHHHHCCCCCEEEEECCCCCCCHHHH LSSGRMQSFIAEIKNRYPDRYIIIDTPPLLSFAETYSLANMVDGVVFVVKEGGATMSNVK HHCCCHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHH DALGHLKKEKVYGVVYNNVGINRFDENYRYRNYYAYYKDNGAQ HHHHHHHHHHEEEEEEECCCCCCCCCCCEEEEEEEEECCCCCC >Mature Secondary Structure SRIESILEKAAKMRQDKTPGESRVLVEQREVPRAVIEPEVFQPDTRIAVDNPYLVTISE HHHHHHHHHHHHHHCCCCCCCCEEEEEHHHCCHHHCCCCCCCCCCEEEECCCEEEEECC PRSPVTEEYRKLKSIILKLTNSGQFKNTIMVTSAVSGEGKTITSINLAVALAQEFDHTVL CCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCEEEEHHHHHEEHHHCCCEEE LVDADLRRPGTSSYLGIRAEVGLSDCLYGKVDVKDALVKTGIGKLVVLPAGSRVENPVEL EEECCCCCCCCCCEEEEEEECCCHHHCCCCCCHHHHHHHCCCCCEEEEECCCCCCCHHHH LSSGRMQSFIAEIKNRYPDRYIIIDTPPLLSFAETYSLANMVDGVVFVVKEGGATMSNVK HHCCCHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHH DALGHLKKEKVYGVVYNNVGINRFDENYRYRNYYAYYKDNGAQ HHHHHHHHHHEEEEEEECCCCCCCCCCCEEEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8969506; 9384377 [H]