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The map label for this gene is yibP [H]

Identifier: 78223061

GI number: 78223061

Start: 2067377

End: 2068561

Strand: Reverse

Name: yibP [H]

Synonym: Gmet_1854

Alternate gene names: 78223061

Gene position: 2068561-2067377 (Counterclockwise)

Preceding gene: 78223062

Following gene: 78223060

Centisome position: 51.75

GC content: 51.56

Gene sequence:

>1185_bases
ATGAGATGGCTACAGTCCATAACCGCTTTGCTGGTGGTGCTCCTTACGGCGGCTGCAGCCGATGCCGATGTGCGTGACCA
GTTGCAGGGGGTCAAGAAGGAAATCAAGGAGAAGAAGCAACTTCTGAAAAAGACCACAAAGGTGGAGCAGCAGGTGTCGG
GCGAACTGCAAGCCATTGACCGGAACCTCAAACAAAAGGAAGCTCAGTTTGCGTCCCTTGCCAGGGAGCTCCAGGGCGTG
GAGCGAACCATCTCCAAGACCGAGACGGAAATTAATACTGTACGGAATGAAGTTGAGCAGAAAAAGCATGAGATTGAGCG
CCGACTTGTTGCCGTCTATAAAGCCGGGGAAATCGGTAATGTGAGGGTTTTTTACTCCTCTGAGTCGTTCCCCCAGATGG
TAGAAAATCTGCGGTACATGAGGTCGGTCATTGATAACGACCGAAAACTCTTTGCCGACTACAACAAGAAAATTGCGGAA
CTTTCAAAGCTTAAGGTGGTACTCGAAAACGATGCCAACCGTAAGGAACGTCTCAAGATTGGCATCGAGCAGAAAAAGCA
GGAGATCGCAGGCGAAAAAAGCAACAAGGCGGCCTATCTCGTAAAGGTGCGGCAAGACAAGCAGGCCCATCTGGCGTCCT
TGCGTGAGCTCCAGGCCAACGCCGGAAGGCTTCAGGCAATGGTGCGAAAGCTTGAAGCCATGAGTAGAAAAAGCTATACT
TCAGCTGCTCGGAAACCATCGGCAAAAGGGATGTCGCCGGTACTTCCTCCCATTTCGGACAAGGGTTTCGGTGCTCAGCG
GGGGAGACTGTCGCTGCCTGTTAGTGGCAAAATTGTGAGCGGATTTGGACGTCATAAACATCCGGAATTCAATTCCTACA
CAGTAAGTAATGGTGTTTCCATAGCAGCCCCCTCTGGTGCCGATATCAAGGCTGTCTACGAAGGCAAAGTCATTTTTGCA
AACTACTTTAAAGGTTACGGTAATATGGTGATTGTTGATCATGGCGGGGGATTTTTCAGCCTTTACGCCCATGCTTCGCG
AATCGCCAAACGGGTGGGAGCAGAGGTGGCGAGAAACGAGACAATCGCCAGTGTCGGGGATGTCGATTCCCCGCGGGGTG
ATATGCTCTATTTCGAGATCCGTTATCAGGGACGTCCGGTCGATCCGGCGTCATGGTGCAGGTAG

Upstream 100 bases:

>100_bases
TCCTTCCGCCATTGTATATTGCCGGAATTCTTGCCGGAGGAGTGGTCCTCGGGTTCCTTGGTAGCCTCACTTCCCTGAAA
CGATTCATCAATAACCCGCA

Downstream 100 bases:

>100_bases
ACTTAACTAATCATCGCGGGAGGCATGATGTTTGGAACCAGGAAGGGTAAAAAAATTGCGCTGTTGGCGGTAGTGCTCTT
TGCGATGCTTGCGGGAGGAG

Product: peptidase M23B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 394; Mature: 394

Protein sequence:

>394_residues
MRWLQSITALLVVLLTAAAADADVRDQLQGVKKEIKEKKQLLKKTTKVEQQVSGELQAIDRNLKQKEAQFASLARELQGV
ERTISKTETEINTVRNEVEQKKHEIERRLVAVYKAGEIGNVRVFYSSESFPQMVENLRYMRSVIDNDRKLFADYNKKIAE
LSKLKVVLENDANRKERLKIGIEQKKQEIAGEKSNKAAYLVKVRQDKQAHLASLRELQANAGRLQAMVRKLEAMSRKSYT
SAARKPSAKGMSPVLPPISDKGFGAQRGRLSLPVSGKIVSGFGRHKHPEFNSYTVSNGVSIAAPSGADIKAVYEGKVIFA
NYFKGYGNMVIVDHGGGFFSLYAHASRIAKRVGAEVARNETIASVGDVDSPRGDMLYFEIRYQGRPVDPASWCR

Sequences:

>Translated_394_residues
MRWLQSITALLVVLLTAAAADADVRDQLQGVKKEIKEKKQLLKKTTKVEQQVSGELQAIDRNLKQKEAQFASLARELQGV
ERTISKTETEINTVRNEVEQKKHEIERRLVAVYKAGEIGNVRVFYSSESFPQMVENLRYMRSVIDNDRKLFADYNKKIAE
LSKLKVVLENDANRKERLKIGIEQKKQEIAGEKSNKAAYLVKVRQDKQAHLASLRELQANAGRLQAMVRKLEAMSRKSYT
SAARKPSAKGMSPVLPPISDKGFGAQRGRLSLPVSGKIVSGFGRHKHPEFNSYTVSNGVSIAAPSGADIKAVYEGKVIFA
NYFKGYGNMVIVDHGGGFFSLYAHASRIAKRVGAEVARNETIASVGDVDSPRGDMLYFEIRYQGRPVDPASWCR
>Mature_394_residues
MRWLQSITALLVVLLTAAAADADVRDQLQGVKKEIKEKKQLLKKTTKVEQQVSGELQAIDRNLKQKEAQFASLARELQGV
ERTISKTETEINTVRNEVEQKKHEIERRLVAVYKAGEIGNVRVFYSSESFPQMVENLRYMRSVIDNDRKLFADYNKKIAE
LSKLKVVLENDANRKERLKIGIEQKKQEIAGEKSNKAAYLVKVRQDKQAHLASLRELQANAGRLQAMVRKLEAMSRKSYT
SAARKPSAKGMSPVLPPISDKGFGAQRGRLSLPVSGKIVSGFGRHKHPEFNSYTVSNGVSIAAPSGADIKAVYEGKVIFA
NYFKGYGNMVIVDHGGGFFSLYAHASRIAKRVGAEVARNETIASVGDVDSPRGDMLYFEIRYQGRPVDPASWCR

Specific function: Unknown

COG id: COG4942

COG function: function code D; Membrane-bound metallopeptidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0756 [H]

Homologues:

Organism=Escherichia coli, GI87082297, Length=416, Percent_Identity=26.9230769230769, Blast_Score=115, Evalue=5e-27,
Organism=Escherichia coli, GI1789099, Length=118, Percent_Identity=34.7457627118644, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI87082174, Length=176, Percent_Identity=27.2727272727273, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF01551 Peptidase_M23 [H]

EC number: NA

Molecular weight: Translated: 44015; Mature: 44015

Theoretical pI: Translated: 10.45; Mature: 10.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRWLQSITALLVVLLTAAAADADVRDQLQGVKKEIKEKKQLLKKTTKVEQQVSGELQAID
CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RNLKQKEAQFASLARELQGVERTISKTETEINTVRNEVEQKKHEIERRLVAVYKAGEIGN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
VRVFYSSESFPQMVENLRYMRSVIDNDRKLFADYNKKIAELSKLKVVLENDANRKERLKI
EEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHH
GIEQKKQEIAGEKSNKAAYLVKVRQDKQAHLASLRELQANAGRLQAMVRKLEAMSRKSYT
CHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAARKPSAKGMSPVLPPISDKGFGAQRGRLSLPVSGKIVSGFGRHKHPEFNSYTVSNGVS
HHHCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHCCCCCCCCCCCCEEECCCEE
IAAPSGADIKAVYEGKVIFANYFKGYGNMVIVDHGGGFFSLYAHASRIAKRVGAEVARNE
EECCCCCCEEEEECCCEEEEEHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCC
TIASVGDVDSPRGDMLYFEIRYQGRPVDPASWCR
HHHHCCCCCCCCCCEEEEEEEECCCCCCHHHCCC
>Mature Secondary Structure
MRWLQSITALLVVLLTAAAADADVRDQLQGVKKEIKEKKQLLKKTTKVEQQVSGELQAID
CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RNLKQKEAQFASLARELQGVERTISKTETEINTVRNEVEQKKHEIERRLVAVYKAGEIGN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
VRVFYSSESFPQMVENLRYMRSVIDNDRKLFADYNKKIAELSKLKVVLENDANRKERLKI
EEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHH
GIEQKKQEIAGEKSNKAAYLVKVRQDKQAHLASLRELQANAGRLQAMVRKLEAMSRKSYT
CHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAARKPSAKGMSPVLPPISDKGFGAQRGRLSLPVSGKIVSGFGRHKHPEFNSYTVSNGVS
HHHCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHCCCCCCCCCCCCEEECCCEE
IAAPSGADIKAVYEGKVIFANYFKGYGNMVIVDHGGGFFSLYAHASRIAKRVGAEVARNE
EECCCCCCEEEEECCCEEEEEHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCC
TIASVGDVDSPRGDMLYFEIRYQGRPVDPASWCR
HHHHCCCCCCCCCCEEEEEEEECCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]