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The map label for this gene is ctpA [H]

Identifier: 78223060

GI number: 78223060

Start: 2066018

End: 2067349

Strand: Reverse

Name: ctpA [H]

Synonym: Gmet_1853

Alternate gene names: 78223060

Gene position: 2067349-2066018 (Counterclockwise)

Preceding gene: 78223061

Following gene: 78223059

Centisome position: 51.72

GC content: 50.98

Gene sequence:

>1332_bases
ATGTTTGGAACCAGGAAGGGTAAAAAAATTGCGCTGTTGGCGGTAGTGCTCTTTGCGATGCTTGCGGGAGGAGGCTTTGT
TGCCCAGAAACACTGTGCGGCACAGGGCGGAAACGATTATGAGTCCATCGAATTATTTACCGATGTCCTCGCCATCGTAA
AAAAGAGTTACGTCGAAGAGGTCGATACCAAGAAACTCATCTATGGGGCCATCAACGGTATGTTGGCATCTTTAGATCCC
CATAGCTCCTTTATGCCTCCTGATATGTACAAGGAAATGAAGATAGACACCAAGGGATCCTTTGGGGGACTCGGCATAGA
GATAACCATCAAGGATGGTATCCTGACGGTTATCTCGCCAATTGAGGACACCCCAGCTTTCCGTGCCGGAATCAAGGCTG
GCGATCAGATTTTGAAGATTGATGACCGCTTCACCAAGGACATGACCATTATGGATGCCGTAAAGCGAATGCGCGGCGCG
AAGGGGACCAAGGTCATCCTGACCATCGTGCGGGAGGGATTTGACAAGCCGAAGGACTTCACCCTCGTACGTGACATCAT
TCAGGTTAAGAGTGTCCGTTTCTCGTCTCTCGACAATGGTTATGGTTACATCAGAATAGCCCAGTTTCAGGAGAAGACAG
ATGATGATTTGGTGAAGGCTCTTGCGACGCTGAAAGAGGAAAATGGCGGGTCCTTGAAGGGGCTTGTCCTTGACCTTCGC
AACGATCCTGGCGGGCTTCTGGACCAGGCGGTCAAGGTTGCAGACCATTTTGTCGAGCAAGGACTTATTGTCTATACAGA
AGGTCGAGAGAAGGATTCACGGATGCAGTTCAACGCCCACAAGGGAGGAACGGAACCAGCCTATCCGATGGTTGTGCTCA
TTAACGGTGGCAGTGCGAGTGCTTCTGAGATCGTTGCCGGTGCCTTGCAGGACCACAAGCGGGCAGTCGTTATGGGGACG
CAGAGTTTTGGCAAGGGTTCGGTGCAGACAATCATTCCGCTTTCTGATGATTCGGGACTGCGTCTTACCACAGCGCGTTA
CTACACGCCGAACGGGCGATCGATCCAGGCAAAGGGAATAACCCCTGACATCATTGTGGAACGTGCCGAAATTCAACCAA
CCGAGAAAAAGGATGGCCATATCCGGGAAAAGGATCTGGAAAACCACTTCGAGTCCGGAGAGAAGGTGGAGGGGGAAGAC
AAGAAAACGGAGAAAGGGAAGGTTCCCGCCGCCAAGAGTGATGATCAGTTGAAAGGAGATTACCAAGTGTTGCGCGCGCT
TGATCTCCTGAAAGGATGGGAAATCCTTAAGACGATGAATAGGGCTAATTAG

Upstream 100 bases:

>100_bases
GCGGGGTGATATGCTCTATTTCGAGATCCGTTATCAGGGACGTCCGGTCGATCCGGCGTCATGGTGCAGGTAGACTTAAC
TAATCATCGCGGGAGGCATG

Downstream 100 bases:

>100_bases
GTCTATTAGCGGGGCAGAAGTAAAAAAGAGGGGAGTCCATCCCCTCTTTTTTTATGCGTCTGTTTTTAAAGGGAGCATTT
CTTGACTCATTTCTCCTTTT

Product: peptidase S41A, C-terminal protease

Products: NA

Alternate protein names: C-terminal-processing protease [H]

Number of amino acids: Translated: 443; Mature: 443

Protein sequence:

>443_residues
MFGTRKGKKIALLAVVLFAMLAGGGFVAQKHCAAQGGNDYESIELFTDVLAIVKKSYVEEVDTKKLIYGAINGMLASLDP
HSSFMPPDMYKEMKIDTKGSFGGLGIEITIKDGILTVISPIEDTPAFRAGIKAGDQILKIDDRFTKDMTIMDAVKRMRGA
KGTKVILTIVREGFDKPKDFTLVRDIIQVKSVRFSSLDNGYGYIRIAQFQEKTDDDLVKALATLKEENGGSLKGLVLDLR
NDPGGLLDQAVKVADHFVEQGLIVYTEGREKDSRMQFNAHKGGTEPAYPMVVLINGGSASASEIVAGALQDHKRAVVMGT
QSFGKGSVQTIIPLSDDSGLRLTTARYYTPNGRSIQAKGITPDIIVERAEIQPTEKKDGHIREKDLENHFESGEKVEGED
KKTEKGKVPAAKSDDQLKGDYQVLRALDLLKGWEILKTMNRAN

Sequences:

>Translated_443_residues
MFGTRKGKKIALLAVVLFAMLAGGGFVAQKHCAAQGGNDYESIELFTDVLAIVKKSYVEEVDTKKLIYGAINGMLASLDP
HSSFMPPDMYKEMKIDTKGSFGGLGIEITIKDGILTVISPIEDTPAFRAGIKAGDQILKIDDRFTKDMTIMDAVKRMRGA
KGTKVILTIVREGFDKPKDFTLVRDIIQVKSVRFSSLDNGYGYIRIAQFQEKTDDDLVKALATLKEENGGSLKGLVLDLR
NDPGGLLDQAVKVADHFVEQGLIVYTEGREKDSRMQFNAHKGGTEPAYPMVVLINGGSASASEIVAGALQDHKRAVVMGT
QSFGKGSVQTIIPLSDDSGLRLTTARYYTPNGRSIQAKGITPDIIVERAEIQPTEKKDGHIREKDLENHFESGEKVEGED
KKTEKGKVPAAKSDDQLKGDYQVLRALDLLKGWEILKTMNRAN
>Mature_443_residues
MFGTRKGKKIALLAVVLFAMLAGGGFVAQKHCAAQGGNDYESIELFTDVLAIVKKSYVEEVDTKKLIYGAINGMLASLDP
HSSFMPPDMYKEMKIDTKGSFGGLGIEITIKDGILTVISPIEDTPAFRAGIKAGDQILKIDDRFTKDMTIMDAVKRMRGA
KGTKVILTIVREGFDKPKDFTLVRDIIQVKSVRFSSLDNGYGYIRIAQFQEKTDDDLVKALATLKEENGGSLKGLVLDLR
NDPGGLLDQAVKVADHFVEQGLIVYTEGREKDSRMQFNAHKGGTEPAYPMVVLINGGSASASEIVAGALQDHKRAVVMGT
QSFGKGSVQTIIPLSDDSGLRLTTARYYTPNGRSIQAKGITPDIIVERAEIQPTEKKDGHIREKDLENHFESGEKVEGED
KKTEKGKVPAAKSDDQLKGDYQVLRALDLLKGWEILKTMNRAN

Specific function: Involved in protection of the bacterium from thermal and osmotic stresses (Potential) [H]

COG id: COG0793

COG function: function code M; Periplasmic protease

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Escherichia coli, GI1788134, Length=323, Percent_Identity=30.9597523219814, Blast_Score=118, Evalue=1e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR005151
- InterPro:   IPR004447 [H]

Pfam domain/function: PF00595 PDZ; PF03572 Peptidase_S41 [H]

EC number: =3.4.21.102 [H]

Molecular weight: Translated: 48488; Mature: 48488

Theoretical pI: Translated: 7.76; Mature: 7.76

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFGTRKGKKIALLAVVLFAMLAGGGFVAQKHCAAQGGNDYESIELFTDVLAIVKKSYVEE
CCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
VDTKKLIYGAINGMLASLDPHSSFMPPDMYKEMKIDTKGSFGGLGIEITIKDGILTVISP
HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCCCCEEEEEEECCCEEEEECC
IEDTPAFRAGIKAGDQILKIDDRFTKDMTIMDAVKRMRGAKGTKVILTIVREGFDKPKDF
CCCCHHHHHHCCCCCEEEEECCHHHHCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCH
TLVRDIIQVKSVRFSSLDNGYGYIRIAQFQEKTDDDLVKALATLKEENGGSLKGLVLDLR
HHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEEC
NDPGGLLDQAVKVADHFVEQGLIVYTEGREKDSRMQFNAHKGGTEPAYPMVVLINGGSAS
CCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCCEEEECCCCCCCCCCCEEEEEECCCCC
ASEIVAGALQDHKRAVVMGTQSFGKGSVQTIIPLSDDSGLRLTTARYYTPNGRSIQAKGI
HHHHHHHHHHHCCEEEEEECCCCCCCCCEEEEEECCCCCCEEEEEEEECCCCCEEEECCC
TPDIIVERAEIQPTEKKDGHIREKDLENHFESGEKVEGEDKKTEKGKVPAAKSDDQLKGD
CHHHEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
YQVLRALDLLKGWEILKTMNRAN
HHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFGTRKGKKIALLAVVLFAMLAGGGFVAQKHCAAQGGNDYESIELFTDVLAIVKKSYVEE
CCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
VDTKKLIYGAINGMLASLDPHSSFMPPDMYKEMKIDTKGSFGGLGIEITIKDGILTVISP
HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCCCCEEEEEEECCCEEEEECC
IEDTPAFRAGIKAGDQILKIDDRFTKDMTIMDAVKRMRGAKGTKVILTIVREGFDKPKDF
CCCCHHHHHHCCCCCEEEEECCHHHHCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCH
TLVRDIIQVKSVRFSSLDNGYGYIRIAQFQEKTDDDLVKALATLKEENGGSLKGLVLDLR
HHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEEC
NDPGGLLDQAVKVADHFVEQGLIVYTEGREKDSRMQFNAHKGGTEPAYPMVVLINGGSAS
CCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCCEEEECCCCCCCCCCCEEEEEECCCCC
ASEIVAGALQDHKRAVVMGTQSFGKGSVQTIIPLSDDSGLRLTTARYYTPNGRSIQAKGI
HHHHHHHHHHHCCEEEEEECCCCCCCCCEEEEEECCCCCCEEEEEEEECCCCCEEEECCC
TPDIIVERAEIQPTEKKDGHIREKDLENHFESGEKVEGEDKKTEKGKVPAAKSDDQLKGD
CHHHEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
YQVLRALDLLKGWEILKTMNRAN
HHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9141685 [H]