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The map label for this gene is 78223059

Identifier: 78223059

GI number: 78223059

Start: 2065231

End: 2065869

Strand: Reverse

Name: 78223059

Synonym: Gmet_1852

Alternate gene names: NA

Gene position: 2065869-2065231 (Counterclockwise)

Preceding gene: 78223060

Following gene: 78223058

Centisome position: 51.68

GC content: 48.51

Gene sequence:

>639_bases
ATGAACCCACAGCCTTCAGGTGCAACGGTTGATAAAGGATCGGTCAACCCTGAGCAGATTTCCATAAAAACCTTCGGTGG
ACTGGGACTTTCTTATCTCAATTCCCCAATGACCATTTTATGGGAAAGCCAGAAGGCGAGGATACTCTTCTGCTATTTGC
TCATTTCCTACGACCAGTGGCTCCACAGAGACAAACTCATTGACATGTTGTGGCCTGGCTGTGACCCGGTCTCCGGCGCA
AAGAATTTCAAAACCACCTTGAGCAGACTCCGCAAGTCATTTATGGGCCCGCGCAGTATTAATCCCATTATGACTCTTGG
TGAAGCCATCCGTCTCGATTTCAATATTTTCTCCCTTGATTCGAGCCAATTCAAAGGATACGCTCAGACCGGAATCAAGA
TGCTGGCTCGTGGAGACATCTCCGGGGCCAGGAGATATCTCGAAGCTGCTCAGGATGAATATTCTGGGGAGTTCCTTCCC
GAAGAGCCCTTCGATCATCATATCTGCGCTGAACGAGCGGAACTTGAAAGACTTCACGAATCAGTCCTTACTTCTCTTCA
AAAGGTTTACCAACTCGAGGGCAACAACGATGCCGTTGAAGCCATTTCCTTCCTCAAAGCCGTTCACACAAACAGCTGA

Upstream 100 bases:

>100_bases
TTTTTATGCGTCTGTTTTTAAAGGGAGCATTTCTTGACTCATTTCTCCTTTTGTAGTACAAAACGTGAAATCGTTTGTAA
TTTAATTATGGTTAATAAAA

Downstream 100 bases:

>100_bases
TCTATCTATAGAGCTGCCAGGCTAAACCTTCATGTGCACAAATGCATCTGAAGGACCATATTTTTTGGCATCGTATGTGC
TTTACCCTCAATCAAGAGAT

Product: SARP family transcriptional regulator

Products: NA

Alternate protein names: SARP Family Transcriptional Regulator

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MNPQPSGATVDKGSVNPEQISIKTFGGLGLSYLNSPMTILWESQKARILFCYLLISYDQWLHRDKLIDMLWPGCDPVSGA
KNFKTTLSRLRKSFMGPRSINPIMTLGEAIRLDFNIFSLDSSQFKGYAQTGIKMLARGDISGARRYLEAAQDEYSGEFLP
EEPFDHHICAERAELERLHESVLTSLQKVYQLEGNNDAVEAISFLKAVHTNS

Sequences:

>Translated_212_residues
MNPQPSGATVDKGSVNPEQISIKTFGGLGLSYLNSPMTILWESQKARILFCYLLISYDQWLHRDKLIDMLWPGCDPVSGA
KNFKTTLSRLRKSFMGPRSINPIMTLGEAIRLDFNIFSLDSSQFKGYAQTGIKMLARGDISGARRYLEAAQDEYSGEFLP
EEPFDHHICAERAELERLHESVLTSLQKVYQLEGNNDAVEAISFLKAVHTNS
>Mature_212_residues
MNPQPSGATVDKGSVNPEQISIKTFGGLGLSYLNSPMTILWESQKARILFCYLLISYDQWLHRDKLIDMLWPGCDPVSGA
KNFKTTLSRLRKSFMGPRSINPIMTLGEAIRLDFNIFSLDSSQFKGYAQTGIKMLARGDISGARRYLEAAQDEYSGEFLP
EEPFDHHICAERAELERLHESVLTSLQKVYQLEGNNDAVEAISFLKAVHTNS

Specific function: Unknown

COG id: COG3947

COG function: function code T; Response regulator containing CheY-like receiver and SARP domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23822; Mature: 23822

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPQPSGATVDKGSVNPEQISIKTFGGLGLSYLNSPMTILWESQKARILFCYLLISYDQW
CCCCCCCCCCCCCCCCHHEEEEEECCCCCHHHHCCCEEEEECCCCCHHHHHHHHHHHHHH
LHRDKLIDMLWPGCDPVSGAKNFKTTLSRLRKSFMGPRSINPIMTLGEAIRLDFNIFSLD
HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHEEEEEEEECC
SSQFKGYAQTGIKMLARGDISGARRYLEAAQDEYSGEFLPEEPFDHHICAERAELERLHE
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH
SVLTSLQKVYQLEGNNDAVEAISFLKAVHTNS
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNPQPSGATVDKGSVNPEQISIKTFGGLGLSYLNSPMTILWESQKARILFCYLLISYDQW
CCCCCCCCCCCCCCCCHHEEEEEECCCCCHHHHCCCEEEEECCCCCHHHHHHHHHHHHHH
LHRDKLIDMLWPGCDPVSGAKNFKTTLSRLRKSFMGPRSINPIMTLGEAIRLDFNIFSLD
HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHEEEEEEEECC
SSQFKGYAQTGIKMLARGDISGARRYLEAAQDEYSGEFLPEEPFDHHICAERAELERLHE
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH
SVLTSLQKVYQLEGNNDAVEAISFLKAVHTNS
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA