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The map label for this gene is ppe24 [H]

Identifier: 78223058

GI number: 78223058

Start: 2063213

End: 2064868

Strand: Reverse

Name: ppe24 [H]

Synonym: Gmet_1851

Alternate gene names: 78223058

Gene position: 2064868-2063213 (Counterclockwise)

Preceding gene: 78223059

Following gene: 78223057

Centisome position: 51.66

GC content: 51.39

Gene sequence:

>1656_bases
TTGGGTGCTCAACTAATCATTTCTCCAATGACTTTTGATGCTGCGGCATCCTGCACTGGTCTCAACCTGGTGGATATGGG
CAACGGGAGATACAGGGTTGTTGCTCTCGGCCTCATCAATGTTGGCGCTATTGATTTTACACTCACTTACGACAAGGCAT
CATTGTCGAGCCCTAAGGTCGTCAGTGGTGACTTAGCCACCTGGCTGGTTTTCGTGCCGAACGTTGTAGAAACGTCTGGA
ACGGTACAGGTAGTCATGGTCAATGAGCCGCCTGTTTCCGGTTCTGGCACGGTGGCAACTGTTACATTTTCTCCAGTCAG
CAAGTCGTGGGGGAAACCGGCGCTCACCTGCCAGTTAACCGGTCTTGACGCATCGAATCAACCAATTGAGAGCCCCTTGA
CGAGTGAAGACGGTAAAGATGATACTGGCTTATCTTCAGGCACGGGAGGTTCCACAAACACAGGCTCCACTGACACAGGC
TCCACTGACACAGGTTCCACAAACACAGGTTCCACAAACACAGGTTCCACAAACACAGGTTCCACAAACACAGGTTCCAC
AAACACAGGTTCCACAAACACAGGTTCCACAAACACAGGTTCCACAAACACAGGTTCCACAAACACAGGTTCCACAAACA
CGGGTTCCACTGACACGGGTTCCACTGACACAGGCTCCACAAGCACAGAAAATTATCCCGACAAGAGTTCCTCAGACACG
GGTCCCGCGGACAAAGGCTCCTCGGGCAGGGTTTCCTCAGGTCTGGCTCCCTCAGTCACAAGTTCAGTGGACAAGGGTTC
AGTGGACAAGGGTTCAGTGGACAAGGGTTCAGCGGACAAGGGTTCAGCGGACAAGAGTTCAGCGGACAAGAGTTCAGCGG
ACACGCAGGGTTCCAGGATACCGTTTGTAGCTCAAGGTACAATAATTTTACCAGACGCACCTCAGTCGCCCTTGGAACCT
ACATCGCCCGATGCACAGGAGCCGGCTTTGGGCGACCAACCCGCGCAGTGGCAACCATCTCCGGAGGCTGCCGACCGGGA
GGACAAAGAGCATCAGCCTCCAACAGCACCCATTTCTCCACATACGGTCCCTACCACATCGGTACAGGAACAAAAATACG
CGGTTTTCAAGGGAGTGCTTGAGCGATTCAAGGGTTATTCGGGTGACAGGACACCAAAAGCTCTTAGGGCATTGTTTGAT
GAACCCGTGGCCACATCAATCAAGCAGGATCCTGCGATATGCATTACTGACGGGAAGATGATGATAAAAGTCCTGCTTGA
ATTGCCTGAAAGCGGCAGTAATGCGCCAAATTTTGCCCTGAGAGGAGCCCGCCTCACGTCCTTGCAAAAGCAGGGAGACA
ACCGATGGCTGATAGAAGCCGTTCCTGAAGCAGGAAAAATTGAGGCTACGCTTACCATCGTAAATGGGGAGAAAATTGTA
GATTATCCTTTAACCGTCGCTCCGAGGGTGGATGTCGATGTTGACAAAAACGGTGTGACGGATGAAGGAGACTTTTCACT
CTTCCTTTCCAAGAATGGAGCCGCCAAGGTGCCGGCATATGACCTCAACGGTGATGGAAAGCATGATTATATAGATGACT
ATATATATACCGCCAATTACTTGACGGCTGGCGGAGGCAAAAAGAACAAGAAGTAA

Upstream 100 bases:

>100_bases
ATCGTAATCACACCTCTGGCATGGTATCCCGGATTTCTGCTGAACGATTCTGTTTTACGGAGGAAAGTGAATGAAAGTCA
AAAGCCTTTCCCTTCTTCTG

Downstream 100 bases:

>100_bases
AGTTCCCTGTCAGGACAAAAGCCCGCCATACAGTGGCGGGCTTTTTTGTTCGTTGCCCGCCAGAACGGCGGTGTGTTATA
CACTACCAGCGTACATACCA

Product: pentapeptide repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 551; Mature: 550

Protein sequence:

>551_residues
MGAQLIISPMTFDAAASCTGLNLVDMGNGRYRVVALGLINVGAIDFTLTYDKASLSSPKVVSGDLATWLVFVPNVVETSG
TVQVVMVNEPPVSGSGTVATVTFSPVSKSWGKPALTCQLTGLDASNQPIESPLTSEDGKDDTGLSSGTGGSTNTGSTDTG
STDTGSTNTGSTNTGSTNTGSTNTGSTNTGSTNTGSTNTGSTNTGSTNTGSTNTGSTDTGSTDTGSTSTENYPDKSSSDT
GPADKGSSGRVSSGLAPSVTSSVDKGSVDKGSVDKGSADKGSADKSSADKSSADTQGSRIPFVAQGTIILPDAPQSPLEP
TSPDAQEPALGDQPAQWQPSPEAADREDKEHQPPTAPISPHTVPTTSVQEQKYAVFKGVLERFKGYSGDRTPKALRALFD
EPVATSIKQDPAICITDGKMMIKVLLELPESGSNAPNFALRGARLTSLQKQGDNRWLIEAVPEAGKIEATLTIVNGEKIV
DYPLTVAPRVDVDVDKNGVTDEGDFSLFLSKNGAAKVPAYDLNGDGKHDYIDDYIYTANYLTAGGGKKNKK

Sequences:

>Translated_551_residues
MGAQLIISPMTFDAAASCTGLNLVDMGNGRYRVVALGLINVGAIDFTLTYDKASLSSPKVVSGDLATWLVFVPNVVETSG
TVQVVMVNEPPVSGSGTVATVTFSPVSKSWGKPALTCQLTGLDASNQPIESPLTSEDGKDDTGLSSGTGGSTNTGSTDTG
STDTGSTNTGSTNTGSTNTGSTNTGSTNTGSTNTGSTNTGSTNTGSTNTGSTNTGSTDTGSTDTGSTSTENYPDKSSSDT
GPADKGSSGRVSSGLAPSVTSSVDKGSVDKGSVDKGSADKGSADKSSADKSSADTQGSRIPFVAQGTIILPDAPQSPLEP
TSPDAQEPALGDQPAQWQPSPEAADREDKEHQPPTAPISPHTVPTTSVQEQKYAVFKGVLERFKGYSGDRTPKALRALFD
EPVATSIKQDPAICITDGKMMIKVLLELPESGSNAPNFALRGARLTSLQKQGDNRWLIEAVPEAGKIEATLTIVNGEKIV
DYPLTVAPRVDVDVDKNGVTDEGDFSLFLSKNGAAKVPAYDLNGDGKHDYIDDYIYTANYLTAGGGKKNKK
>Mature_550_residues
GAQLIISPMTFDAAASCTGLNLVDMGNGRYRVVALGLINVGAIDFTLTYDKASLSSPKVVSGDLATWLVFVPNVVETSGT
VQVVMVNEPPVSGSGTVATVTFSPVSKSWGKPALTCQLTGLDASNQPIESPLTSEDGKDDTGLSSGTGGSTNTGSTDTGS
TDTGSTNTGSTNTGSTNTGSTNTGSTNTGSTNTGSTNTGSTNTGSTNTGSTNTGSTDTGSTDTGSTSTENYPDKSSSDTG
PADKGSSGRVSSGLAPSVTSSVDKGSVDKGSVDKGSADKGSADKSSADKSSADTQGSRIPFVAQGTIILPDAPQSPLEPT
SPDAQEPALGDQPAQWQPSPEAADREDKEHQPPTAPISPHTVPTTSVQEQKYAVFKGVLERFKGYSGDRTPKALRALFDE
PVATSIKQDPAICITDGKMMIKVLLELPESGSNAPNFALRGARLTSLQKQGDNRWLIEAVPEAGKIEATLTIVNGEKIVD
YPLTVAPRVDVDVDKNGVTDEGDFSLFLSKNGAAKVPAYDLNGDGKHDYIDDYIYTANYLTAGGGKKNKK

Specific function: Unknown

COG id: COG5651

COG function: function code N; PPE-repeat proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mycobacterial PPE family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002989
- InterPro:   IPR000030 [H]

Pfam domain/function: PF01469 Pentapeptide_2; PF00823 PPE [H]

EC number: NA

Molecular weight: Translated: 56667; Mature: 56536

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGAQLIISPMTFDAAASCTGLNLVDMGNGRYRVVALGLINVGAIDFTLTYDKASLSSPKV
CCCEEEEECCCCCCCCCCCCCEEEECCCCEEEEEEEEEEEECEEEEEEEECCCCCCCCCE
VSGDLATWLVFVPNVVETSGTVQVVMVNEPPVSGSGTVATVTFSPVSKSWGKPALTCQLT
ECCCHHEEEEECCHHCCCCCCEEEEEECCCCCCCCCCEEEEEECCCHHCCCCCEEEEEEE
GLDASNQPIESPLTSEDGKDDTGLSSGTGGSTNTGSTDTGSTDTGSTNTGSTNTGSTNTG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
STNTGSTNTGSTNTGSTNTGSTNTGSTNTGSTNTGSTDTGSTDTGSTSTENYPDKSSSDT
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GPADKGSSGRVSSGLAPSVTSSVDKGSVDKGSVDKGSADKGSADKSSADKSSADTQGSRI
CCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PFVAQGTIILPDAPQSPLEPTSPDAQEPALGDQPAQWQPSPEAADREDKEHQPPTAPISP
CEEECCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCC
HTVPTTSVQEQKYAVFKGVLERFKGYSGDRTPKALRALFDEPVATSIKQDPAICITDGKM
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHCCCCCEEEECCHH
MIKVLLELPESGSNAPNFALRGARLTSLQKQGDNRWLIEAVPEAGKIEATLTIVNGEKIV
HHHHHHHCCCCCCCCCCEEECCCHHHHHHHCCCCEEEEEECCCCCCEEEEEEEECCCEEE
DYPLTVAPRVDVDVDKNGVTDEGDFSLFLSKNGAAKVPAYDLNGDGKHDYIDDYIYTANY
ECCEEECCCCCEECCCCCCCCCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCEEEEEEE
LTAGGGKKNKK
EECCCCCCCCC
>Mature Secondary Structure 
GAQLIISPMTFDAAASCTGLNLVDMGNGRYRVVALGLINVGAIDFTLTYDKASLSSPKV
CCEEEEECCCCCCCCCCCCCEEEECCCCEEEEEEEEEEEECEEEEEEEECCCCCCCCCE
VSGDLATWLVFVPNVVETSGTVQVVMVNEPPVSGSGTVATVTFSPVSKSWGKPALTCQLT
ECCCHHEEEEECCHHCCCCCCEEEEEECCCCCCCCCCEEEEEECCCHHCCCCCEEEEEEE
GLDASNQPIESPLTSEDGKDDTGLSSGTGGSTNTGSTDTGSTDTGSTNTGSTNTGSTNTG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
STNTGSTNTGSTNTGSTNTGSTNTGSTNTGSTNTGSTDTGSTDTGSTSTENYPDKSSSDT
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GPADKGSSGRVSSGLAPSVTSSVDKGSVDKGSVDKGSADKGSADKSSADKSSADTQGSRI
CCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PFVAQGTIILPDAPQSPLEPTSPDAQEPALGDQPAQWQPSPEAADREDKEHQPPTAPISP
CEEECCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCC
HTVPTTSVQEQKYAVFKGVLERFKGYSGDRTPKALRALFDEPVATSIKQDPAICITDGKM
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHCCCCCEEEECCHH
MIKVLLELPESGSNAPNFALRGARLTSLQKQGDNRWLIEAVPEAGKIEATLTIVNGEKIV
HHHHHHHCCCCCCCCCCEEECCCHHHHHHHCCCCEEEEEECCCCCCEEEEEEEECCCEEE
DYPLTVAPRVDVDVDKNGVTDEGDFSLFLSKNGAAKVPAYDLNGDGKHDYIDDYIYTANY
ECCEEECCCCCEECCCCCCCCCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCEEEEEEE
LTAGGGKKNKK
EECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]