| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78222750
Identifier: 78222750
GI number: 78222750
Start: 1742148
End: 1742408
Strand: Reverse
Name: 78222750
Synonym: Gmet_1538
Alternate gene names: NA
Gene position: 1742408-1742148 (Counterclockwise)
Preceding gene: 78222751
Following gene: 78222749
Centisome position: 43.59
GC content: 55.17
Gene sequence:
>261_bases ATGTCTCCACGTGGCCCGGGACAGGAGGCAACAGTGAGCGCAACAAGTAATGGCAACATGATGCACGAAGAGCCTGGCAC GAAGAAACCGTGTCAATCATGCAAATGGCAGATAGCGGACCCCACCAACCCGCTTCGGGGACAGTGCACCGTCAACAGAA ATGCCATGGGTGGCGTGTGGAAACGGTGGGTAACCGACGTAAACAGGATGACCTGCGGCAAACATGAAGTCGGCAAGCTC AGCTTCAGAGAACATGTGTGA
Upstream 100 bases:
>100_bases CATCATCGCCAGAAACGAACAGGCCTTCGGTGCCGATGATCTTGAATACCTGAACACACAACTCTAACAAATACATCCAC GTGGGGGCATTCCCGGCGGG
Downstream 100 bases:
>100_bases TACTGGTCAGGCGGGGTAATTCTGGGCAATCTGGTCCCACCAGGCTTTGACTGCCCCGTTATTACAGACCGGGAAGACGG CGGTACCGACATCGGTGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 86; Mature: 85
Protein sequence:
>86_residues MSPRGPGQEATVSATSNGNMMHEEPGTKKPCQSCKWQIADPTNPLRGQCTVNRNAMGGVWKRWVTDVNRMTCGKHEVGKL SFREHV
Sequences:
>Translated_86_residues MSPRGPGQEATVSATSNGNMMHEEPGTKKPCQSCKWQIADPTNPLRGQCTVNRNAMGGVWKRWVTDVNRMTCGKHEVGKL SFREHV >Mature_85_residues SPRGPGQEATVSATSNGNMMHEEPGTKKPCQSCKWQIADPTNPLRGQCTVNRNAMGGVWKRWVTDVNRMTCGKHEVGKLS FREHV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9540; Mature: 9409
Theoretical pI: Translated: 9.62; Mature: 9.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.7 %Cys (Translated Protein) 5.8 %Met (Translated Protein) 10.5 %Cys+Met (Translated Protein) 4.7 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 9.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPRGPGQEATVSATSNGNMMHEEPGTKKPCQSCKWQIADPTNPLRGQCTVNRNAMGGVW CCCCCCCCCEEEEECCCCCEEECCCCCCCCCCCCCEEECCCCCCCCCEEEECCCCCCHHH KRWVTDVNRMTCGKHEVGKLSFREHV HHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure SPRGPGQEATVSATSNGNMMHEEPGTKKPCQSCKWQIADPTNPLRGQCTVNRNAMGGVW CCCCCCCCEEEEECCCCCEEECCCCCCCCCCCCCEEECCCCCCCCCEEEECCCCCCHHH KRWVTDVNRMTCGKHEVGKLSFREHV HHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA