| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78222749
Identifier: 78222749
GI number: 78222749
Start: 1741122
End: 1742006
Strand: Reverse
Name: 78222749
Synonym: Gmet_1537
Alternate gene names: NA
Gene position: 1742006-1741122 (Counterclockwise)
Preceding gene: 78222750
Following gene: 78222748
Centisome position: 43.58
GC content: 52.99
Gene sequence:
>885_bases ATGTCAGCCAGTAAACAGAGTAACTTATCGGTACCCCAGGAAGATCCCTATTTTTATGTAAGCAAGGACGTGGCGGATAT TTTTGAAAAGATCCACCAGCTATCGCAAAAAAAACCGGTGAACGTGCTGATCTCCGGTAGGCAGGGATGTGGAAAGTCTT CCCTGGTAAGGCAGTATGCCGCCATCTACCAGAACCCGTTATCGACGTTTCAAGTCGGCATACTTTCCGAGCCTGGCCAG CTGTTTGGTGAATACGCACTGGAAGCCGGAGAGACGAAATATAAACAGTTTCTGTTCCCCGAGGCTATCCAGACCCCCAA CTGTGTCATTCACCTGGAAGAGATCAACCGGCCGGAACACCCGAAGGCCTTGAATATGCTTTTCTCCCTCTTGTCCGACA GCCGCGAGGTCTGGCTCGAAGAGCTGGGACAGGTAAACGTGGCGAAAGGGGTGGTGTTCTTTGCCACCTTGAATGAGGGG GACGACTTTGTCGGGACTGAACTGCTCGATGCCGCCCTGCGTGATCGCTTTTACTTTTTGCTGATGGATTATCTGCCAAA CGACGTGGAAAGAGAGGTGTTGGTAAAAAAAACCGGCATCTCCGCTGTGCAGGCAGACGACATCATCTCCGCCCTTAACT TCCTGAGAAGCCATTCCGATCTCAGGATCGACGTATCGACCAGAACGGCCCTCATGATCGGCGATATGATGGCAGTCGGC GCAAGCTTGCGACAGGCCCTGGCCGTGAGTCTCCAGACCAGCCAGGAGGCGCTTGAGTCGGTGCTCATCGGTCTCCATGT CAACAAGGGGTACACCGAGAGCGTCGGCAATGAATACGTTCTGTTCGACCACACCTGGCAACAGCACACCAGAGAATATC GATGA
Upstream 100 bases:
>100_bases AGGCTTTGACTGCCCCGTTATTACAGACCGGGAAGACGGCGGTACCGACATCGGTGCCGCCTGTCACCTTTACCTGAAGA CCACCGTGAGGACACATCGT
Downstream 100 bases:
>100_bases TTCATTCCGAAAAAACCTCTCGGGACGGTAAAGCTCAGGAACGTTTCCTGATAGCCGGTGAAAACGGTTTTTCCGAATAC TGGCGCAGGGACAAATCGCC
Product: ATPase
Products: NA
Alternate protein names: Chaperone
Number of amino acids: Translated: 294; Mature: 293
Protein sequence:
>294_residues MSASKQSNLSVPQEDPYFYVSKDVADIFEKIHQLSQKKPVNVLISGRQGCGKSSLVRQYAAIYQNPLSTFQVGILSEPGQ LFGEYALEAGETKYKQFLFPEAIQTPNCVIHLEEINRPEHPKALNMLFSLLSDSREVWLEELGQVNVAKGVVFFATLNEG DDFVGTELLDAALRDRFYFLLMDYLPNDVEREVLVKKTGISAVQADDIISALNFLRSHSDLRIDVSTRTALMIGDMMAVG ASLRQALAVSLQTSQEALESVLIGLHVNKGYTESVGNEYVLFDHTWQQHTREYR
Sequences:
>Translated_294_residues MSASKQSNLSVPQEDPYFYVSKDVADIFEKIHQLSQKKPVNVLISGRQGCGKSSLVRQYAAIYQNPLSTFQVGILSEPGQ LFGEYALEAGETKYKQFLFPEAIQTPNCVIHLEEINRPEHPKALNMLFSLLSDSREVWLEELGQVNVAKGVVFFATLNEG DDFVGTELLDAALRDRFYFLLMDYLPNDVEREVLVKKTGISAVQADDIISALNFLRSHSDLRIDVSTRTALMIGDMMAVG ASLRQALAVSLQTSQEALESVLIGLHVNKGYTESVGNEYVLFDHTWQQHTREYR >Mature_293_residues SASKQSNLSVPQEDPYFYVSKDVADIFEKIHQLSQKKPVNVLISGRQGCGKSSLVRQYAAIYQNPLSTFQVGILSEPGQL FGEYALEAGETKYKQFLFPEAIQTPNCVIHLEEINRPEHPKALNMLFSLLSDSREVWLEELGQVNVAKGVVFFATLNEGD DFVGTELLDAALRDRFYFLLMDYLPNDVEREVLVKKTGISAVQADDIISALNFLRSHSDLRIDVSTRTALMIGDMMAVGA SLRQALAVSLQTSQEALESVLIGLHVNKGYTESVGNEYVLFDHTWQQHTREYR
Specific function: Unknown
COG id: COG0714
COG function: function code R; MoxR-like ATPases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33014; Mature: 32883
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSASKQSNLSVPQEDPYFYVSKDVADIFEKIHQLSQKKPVNVLISGRQGCGKSSLVRQYA CCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHH AIYQNPLSTFQVGILSEPGQLFGEYALEAGETKYKQFLFPEAIQTPNCVIHLEEINRPEH HHHHCCHHHHEEEECCCCHHHHHHHHHHCCCHHHHHHHCHHHHCCCCEEEEHHHCCCCCC PKALNMLFSLLSDSREVWLEELGQVNVAKGVVFFATLNEGDDFVGTELLDAALRDRFYFL CHHHHHHHHHHHCHHHHHHHHHCCCEECCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHH LMDYLPNDVEREVLVKKTGISAVQADDIISALNFLRSHSDLRIDVSTRTALMIGDMMAVG HHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHH ASLRQALAVSLQTSQEALESVLIGLHVNKGYTESVGNEYVLFDHTWQQHTREYR HHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHCCCEEEEEECCHHHHHCCCC >Mature Secondary Structure SASKQSNLSVPQEDPYFYVSKDVADIFEKIHQLSQKKPVNVLISGRQGCGKSSLVRQYA CCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHH AIYQNPLSTFQVGILSEPGQLFGEYALEAGETKYKQFLFPEAIQTPNCVIHLEEINRPEH HHHHCCHHHHEEEECCCCHHHHHHHHHHCCCHHHHHHHCHHHHCCCCEEEEHHHCCCCCC PKALNMLFSLLSDSREVWLEELGQVNVAKGVVFFATLNEGDDFVGTELLDAALRDRFYFL CHHHHHHHHHHHCHHHHHHHHHCCCEECCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHH LMDYLPNDVEREVLVKKTGISAVQADDIISALNFLRSHSDLRIDVSTRTALMIGDMMAVG HHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHH ASLRQALAVSLQTSQEALESVLIGLHVNKGYTESVGNEYVLFDHTWQQHTREYR HHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHCCCEEEEEECCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA