| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
Click here to switch to the map view.
The map label for this gene is 78222748
Identifier: 78222748
GI number: 78222748
Start: 1739416
End: 1741125
Strand: Reverse
Name: 78222748
Synonym: Gmet_1536
Alternate gene names: NA
Gene position: 1741125-1739416 (Counterclockwise)
Preceding gene: 78222749
Following gene: 78222747
Centisome position: 43.56
GC content: 52.51
Gene sequence:
>1710_bases ATGATTCATTCCGAAAAAACCTCTCGGGACGGTAAAGCTCAGGAACGTTTCCTGATAGCCGGTGAAAACGGTTTTTCCGA ATACTGGCGCAGGGACAAATCGCCCGTTGAGATACTGGAACTGGCGAAATTGCTGCGTGGCATCAGAAAGGTGGTTTCTC AAGTCGGCAGAAACAGCGGCAGCGTAGTCTGGGAAGGAATGCCGATTACCCGATCCGACAGCATCGAAATTGATCCCTCA CCGATCATGGGACGCTATCCGATCCCCGCAGTTCAGGCCGACATTGCAATAGGGCTCGCCATCAGAAGCGCCTACCTGAA GACGGAATGGACCGGCCATGTCCTGAAGCTGGCCCAGACAAAACTCGAACTCCCTCCGATGTATGCATACAAATTTTCCC TCTTTCTGGATATTGCGGAAAAGGTTTATGCGGATCTCGTTGCCAACAGGAGCATCCTCGGCCTGTATGCGGCAAAGGCC CGGGAATGGGAGATTGCGAAAGCGGCAAAACAGTTCATCAGCCCCCCCTCATTCAGCGAGCTGCTGCACATCTGGTGGCG GATCGCCGCCGATGCGGAACAAGAAACCTACAAACAACCTTACGAGGATCATTCCGTCGTGGAAATGGCTGGAAGAGCCT CCACAAGCCAGCCCTATACCAAACCCATGGCGCTTCTTAACTCCATTGTGGAAGATTTGATCACACACTGCGCCGCTCTG CCGAGCGTGACTGAACGCTGTGAATACCGGTTGAACCGTTATGCCTCCATTTTCAATGAGTTGCTGGAAATGGTGAAATT CTGGCCGGCCGACAGGAAGGACCCCTTTCTGCTTTCCGCGGATTTCACGGAAGACGTGGCTCAGGAAGACCAGGAAATGG ACGCGGTCAAGGCTACCCTCCTGAGTTTTGCGGACGAGATCGAAAGCACTATTGAGACGAAGCATGTGGATTTCACCGAG CAGGTACGACTGCTCGTGGCCAATTTTGGCGATGTGGTTCGCGTGGAAGGGAATGACATCGTCATGCCGGCGAAGAAGAA TGTCGATAACGCCCTCCTCTACAAGCTGAAAACAGTGCTCCAGTTGGCTGCCCAGCGAAACATCTCCTTCAGCAGAGGCC TGGATTCGGGGAGGATCGATCGCACGCGCCTATACCGGGCGCCCACAACCGGCTCTATTTTCAACCTGAAGAAAACGAAG TACGAATTGCACAACGATATAGTTCTCCTTGTGGACTGCACCGGTTCCATGTCGGAACCCACCAAATGGTCAAAGGCAGA ACTCATCTATCAGACGCTCTTTACGGCCATCCATGATTACAACGCCAATGCCCGGATCTTTGCCTACAACGAACGGAATG AGACCTGCCGGATCACGGAAATTTTCAAGCAGGGCCAATTCTTTTCCGTTACTCCCCATGGCAGAACCGCTTCTGGCGAG GCCATCATCGCCACGGCAATAAGCCTCAAGCCAGGCGCACGCAAACCATTTATCATCCATATTACCGATGGGGCATCCAA CTGGGGGTGCGGGGTGCGCGACGCCATCGCCTACTGCAAGAAGAAGAAGATAAACCTGCTGACCCTGGGGCTTGAATGCG ACCCCATGAACAAAACTGCTCTGTCGGAAGAATATGGCGAAATGATCCAGTTTGTTAACACTATGGAGCAGTTTCCAAAT GTGTTTAAAAAACTTCTTTCACCCAAGTAA
Upstream 100 bases:
>100_bases TGCTCATCGGTCTCCATGTCAACAAGGGGTACACCGAGAGCGTCGGCAATGAATACGTTCTGTTCGACCACACCTGGCAA CAGCACACCAGAGAATATCG
Downstream 100 bases:
>100_bases AGAGAAATGAGCCATACCCGTTGGCGATCAAGGCAGGGCAAACAAAATATCTTTCGGTAAAGGTGAATCAATGAAATATA AAATTGTAACACCGTACACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 569; Mature: 569
Protein sequence:
>569_residues MIHSEKTSRDGKAQERFLIAGENGFSEYWRRDKSPVEILELAKLLRGIRKVVSQVGRNSGSVVWEGMPITRSDSIEIDPS PIMGRYPIPAVQADIAIGLAIRSAYLKTEWTGHVLKLAQTKLELPPMYAYKFSLFLDIAEKVYADLVANRSILGLYAAKA REWEIAKAAKQFISPPSFSELLHIWWRIAADAEQETYKQPYEDHSVVEMAGRASTSQPYTKPMALLNSIVEDLITHCAAL PSVTERCEYRLNRYASIFNELLEMVKFWPADRKDPFLLSADFTEDVAQEDQEMDAVKATLLSFADEIESTIETKHVDFTE QVRLLVANFGDVVRVEGNDIVMPAKKNVDNALLYKLKTVLQLAAQRNISFSRGLDSGRIDRTRLYRAPTTGSIFNLKKTK YELHNDIVLLVDCTGSMSEPTKWSKAELIYQTLFTAIHDYNANARIFAYNERNETCRITEIFKQGQFFSVTPHGRTASGE AIIATAISLKPGARKPFIIHITDGASNWGCGVRDAIAYCKKKKINLLTLGLECDPMNKTALSEEYGEMIQFVNTMEQFPN VFKKLLSPK
Sequences:
>Translated_569_residues MIHSEKTSRDGKAQERFLIAGENGFSEYWRRDKSPVEILELAKLLRGIRKVVSQVGRNSGSVVWEGMPITRSDSIEIDPS PIMGRYPIPAVQADIAIGLAIRSAYLKTEWTGHVLKLAQTKLELPPMYAYKFSLFLDIAEKVYADLVANRSILGLYAAKA REWEIAKAAKQFISPPSFSELLHIWWRIAADAEQETYKQPYEDHSVVEMAGRASTSQPYTKPMALLNSIVEDLITHCAAL PSVTERCEYRLNRYASIFNELLEMVKFWPADRKDPFLLSADFTEDVAQEDQEMDAVKATLLSFADEIESTIETKHVDFTE QVRLLVANFGDVVRVEGNDIVMPAKKNVDNALLYKLKTVLQLAAQRNISFSRGLDSGRIDRTRLYRAPTTGSIFNLKKTK YELHNDIVLLVDCTGSMSEPTKWSKAELIYQTLFTAIHDYNANARIFAYNERNETCRITEIFKQGQFFSVTPHGRTASGE AIIATAISLKPGARKPFIIHITDGASNWGCGVRDAIAYCKKKKINLLTLGLECDPMNKTALSEEYGEMIQFVNTMEQFPN VFKKLLSPK >Mature_569_residues MIHSEKTSRDGKAQERFLIAGENGFSEYWRRDKSPVEILELAKLLRGIRKVVSQVGRNSGSVVWEGMPITRSDSIEIDPS PIMGRYPIPAVQADIAIGLAIRSAYLKTEWTGHVLKLAQTKLELPPMYAYKFSLFLDIAEKVYADLVANRSILGLYAAKA REWEIAKAAKQFISPPSFSELLHIWWRIAADAEQETYKQPYEDHSVVEMAGRASTSQPYTKPMALLNSIVEDLITHCAAL PSVTERCEYRLNRYASIFNELLEMVKFWPADRKDPFLLSADFTEDVAQEDQEMDAVKATLLSFADEIESTIETKHVDFTE QVRLLVANFGDVVRVEGNDIVMPAKKNVDNALLYKLKTVLQLAAQRNISFSRGLDSGRIDRTRLYRAPTTGSIFNLKKTK YELHNDIVLLVDCTGSMSEPTKWSKAELIYQTLFTAIHDYNANARIFAYNERNETCRITEIFKQGQFFSVTPHGRTASGE AIIATAISLKPGARKPFIIHITDGASNWGCGVRDAIAYCKKKKINLLTLGLECDPMNKTALSEEYGEMIQFVNTMEQFPN VFKKLLSPK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64253; Mature: 64253
Theoretical pI: Translated: 7.27; Mature: 7.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIHSEKTSRDGKAQERFLIAGENGFSEYWRRDKSPVEILELAKLLRGIRKVVSQVGRNSG CCCCCCCCCCCCCCCEEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC SVVWEGMPITRSDSIEIDPSPIMGRYPIPAVQADIAIGLAIRSAYLKTEWTGHVLKLAQT CEEEECCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH KLELPPMYAYKFSLFLDIAEKVYADLVANRSILGLYAAKAREWEIAKAAKQFISPPSFSE HCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHCCCCHHHHHHHHHHCCCCCHHH LLHIWWRIAADAEQETYKQPYEDHSVVEMAGRASTSQPYTKPMALLNSIVEDLITHCAAL HHHHHHHHHCCCHHHHHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH PSVTERCEYRLNRYASIFNELLEMVKFWPADRKDPFLLSADFTEDVAQEDQEMDAVKATL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHH LSFADEIESTIETKHVDFTEQVRLLVANFGDVVRVEGNDIVMPAKKNVDNALLYKLKTVL HHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEECCCEEEECCCCCCHHHHHHHHHHHH QLAAQRNISFSRGLDSGRIDRTRLYRAPTTGSIFNLKKTKYELHNDIVLLVDCTGSMSEP HHHHHCCCCHHCCCCCCCCCHHHEEECCCCCCEEECHHHHHHHCCCEEEEEECCCCCCCC TKWSKAELIYQTLFTAIHDYNANARIFAYNERNETCRITEIFKQGQFFSVTPHGRTASGE CCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEHHHHHHHCCCEEEECCCCCCCCCC AIIATAISLKPGARKPFIIHITDGASNWGCGVRDAIAYCKKKKINLLTLGLECDPMNKTA EEEEEEEECCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCCCHH LSEEYGEMIQFVNTMEQFPNVFKKLLSPK HHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MIHSEKTSRDGKAQERFLIAGENGFSEYWRRDKSPVEILELAKLLRGIRKVVSQVGRNSG CCCCCCCCCCCCCCCEEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC SVVWEGMPITRSDSIEIDPSPIMGRYPIPAVQADIAIGLAIRSAYLKTEWTGHVLKLAQT CEEEECCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH KLELPPMYAYKFSLFLDIAEKVYADLVANRSILGLYAAKAREWEIAKAAKQFISPPSFSE HCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHCCCCHHHHHHHHHHCCCCCHHH LLHIWWRIAADAEQETYKQPYEDHSVVEMAGRASTSQPYTKPMALLNSIVEDLITHCAAL HHHHHHHHHCCCHHHHHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH PSVTERCEYRLNRYASIFNELLEMVKFWPADRKDPFLLSADFTEDVAQEDQEMDAVKATL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHH LSFADEIESTIETKHVDFTEQVRLLVANFGDVVRVEGNDIVMPAKKNVDNALLYKLKTVL HHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEECCCEEEECCCCCCHHHHHHHHHHHH QLAAQRNISFSRGLDSGRIDRTRLYRAPTTGSIFNLKKTKYELHNDIVLLVDCTGSMSEP HHHHHCCCCHHCCCCCCCCCHHHEEECCCCCCEEECHHHHHHHCCCEEEEEECCCCCCCC TKWSKAELIYQTLFTAIHDYNANARIFAYNERNETCRITEIFKQGQFFSVTPHGRTASGE CCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEHHHHHHHCCCEEEECCCCCCCCCC AIIATAISLKPGARKPFIIHITDGASNWGCGVRDAIAYCKKKKINLLTLGLECDPMNKTA EEEEEEEECCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCCCHH LSEEYGEMIQFVNTMEQFPNVFKKLLSPK HHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA