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The map label for this gene is yibD [C]

Identifier: 78222705

GI number: 78222705

Start: 1688360

End: 1689220

Strand: Direct

Name: yibD [C]

Synonym: Gmet_1493

Alternate gene names: 78222705

Gene position: 1688360-1689220 (Clockwise)

Preceding gene: 78222704

Following gene: 78222706

Centisome position: 42.24

GC content: 50.87

Gene sequence:

>861_bases
ATGTCCAGCCAGTTAAATCACGGCACGTTGCCAAAAATTTCGATTGTTACCCCCAGTTACAACCAGGCCCAGTATCTCGA
AGCCACCATGAGATCCATCCTGGATCAGGGGTATCCTGATCTGGAATACATAGTCATGGACGGTGGAAGTACCGATGGTT
CGACCGAGATCATACAAAAATATTCAGATCGCCTGACCTACTGGGAAAGCGCTCCGGATAAGGGGCAAGCGGATGCCATA
TTCCGTGGATTCGAGCGGGCCACGGGTGAAATTTTCTGCTACGTCAATTCAGATGATCTGCTTTTGCCGGGTTCCCTGGA
AATGGTTGGCAGATGGTTCAGGGAGCATCCCGACGAAGAGTGGGTGGTCGGCGGAACGATACTGATCGATGGGTTGGGCA
TACCGATCATCCGTTCGCGCAGGGGGCTTCCCGAGGCTGATCTCGGCGTCAAAGTCACCTTCAAGCGCCTTTTGCTGCAC
AATTGCGGCGGATTTCATCAGCCGGCGAGCTTCTGGAGGCGCAGCGCATTCGAGCAAGCAGGGGGCTTCGACAGGACCCT
GCGCTTCTGTTTTGATTACGACTTATTTTTCCGCTTGGCCAAGCGCAGGCCGAGCGGCCGGATACGGTCTTTTCTGGCTG
CCTTCCGTTATCACCCGGCGAGCAAAACCAGCACCCTGGAAAGCGTATTTCGTGAAGAGAATGAAACGCTTTGGAGGCGG
TATGGAAGGTATTTGTATTCAGAAAATCAGATAAGGAATTTCGCCCATAAACAAACTACTCGCGATATGTGGAACAACAG
GATCATAAAGTTAGGATTTTATTTAAAGATTCTCAATGTATCAAATGCGATTGGATCGTAA

Upstream 100 bases:

>100_bases
TGGGTAGTTGTGGACGGAGACTCGTCGAAGAGAATTTCAGCATGAAGCTGTTCGTAAAAAGGCTTCTCAAAATTTACGAG
ACAGTAATAGAGCGTAAGCC

Downstream 100 bases:

>100_bases
CTTACCTTTGAAGGGAATTAGATGTTAACGTTTTTTGTCATATTTATCGGCATAGTGACATTATTTAAACCTATTGTCGG
AATTATATCTTTATTGTTAT

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 286; Mature: 285

Protein sequence:

>286_residues
MSSQLNHGTLPKISIVTPSYNQAQYLEATMRSILDQGYPDLEYIVMDGGSTDGSTEIIQKYSDRLTYWESAPDKGQADAI
FRGFERATGEIFCYVNSDDLLLPGSLEMVGRWFREHPDEEWVVGGTILIDGLGIPIIRSRRGLPEADLGVKVTFKRLLLH
NCGGFHQPASFWRRSAFEQAGGFDRTLRFCFDYDLFFRLAKRRPSGRIRSFLAAFRYHPASKTSTLESVFREENETLWRR
YGRYLYSENQIRNFAHKQTTRDMWNNRIIKLGFYLKILNVSNAIGS

Sequences:

>Translated_286_residues
MSSQLNHGTLPKISIVTPSYNQAQYLEATMRSILDQGYPDLEYIVMDGGSTDGSTEIIQKYSDRLTYWESAPDKGQADAI
FRGFERATGEIFCYVNSDDLLLPGSLEMVGRWFREHPDEEWVVGGTILIDGLGIPIIRSRRGLPEADLGVKVTFKRLLLH
NCGGFHQPASFWRRSAFEQAGGFDRTLRFCFDYDLFFRLAKRRPSGRIRSFLAAFRYHPASKTSTLESVFREENETLWRR
YGRYLYSENQIRNFAHKQTTRDMWNNRIIKLGFYLKILNVSNAIGS
>Mature_285_residues
SSQLNHGTLPKISIVTPSYNQAQYLEATMRSILDQGYPDLEYIVMDGGSTDGSTEIIQKYSDRLTYWESAPDKGQADAIF
RGFERATGEIFCYVNSDDLLLPGSLEMVGRWFREHPDEEWVVGGTILIDGLGIPIIRSRRGLPEADLGVKVTFKRLLLHN
CGGFHQPASFWRRSAFEQAGGFDRTLRFCFDYDLFFRLAKRRPSGRIRSFLAAFRYHPASKTSTLESVFREENETLWRRY
GRYLYSENQIRNFAHKQTTRDMWNNRIIKLGFYLKILNVSNAIGS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 32970; Mature: 32839

Theoretical pI: Translated: 8.98; Mature: 8.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSQLNHGTLPKISIVTPSYNQAQYLEATMRSILDQGYPDLEYIVMDGGSTDGSTEIIQK
CCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHH
YSDRLTYWESAPDKGQADAIFRGFERATGEIFCYVNSDDLLLPGSLEMVGRWFREHPDEE
HHHHHEECCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCEECCCCHHHHHHHHHHCCCCC
WVVGGTILIDGLGIPIIRSRRGLPEADLGVKVTFKRLLLHNCGGFHQPASFWRRSAFEQA
EEECCEEEEECCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
GGFDRTLRFCFDYDLFFRLAKRRPSGRIRSFLAAFRYHPASKTSTLESVFREENETLWRR
CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
YGRYLYSENQIRNFAHKQTTRDMWNNRIIKLGFYLKILNVSNAIGS
HHHHHHCHHHHHHHHHHHHHHHHHCCCEEEEEHEEEEEEHHHCCCC
>Mature Secondary Structure 
SSQLNHGTLPKISIVTPSYNQAQYLEATMRSILDQGYPDLEYIVMDGGSTDGSTEIIQK
CCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHH
YSDRLTYWESAPDKGQADAIFRGFERATGEIFCYVNSDDLLLPGSLEMVGRWFREHPDEE
HHHHHEECCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCEECCCCHHHHHHHHHHCCCCC
WVVGGTILIDGLGIPIIRSRRGLPEADLGVKVTFKRLLLHNCGGFHQPASFWRRSAFEQA
EEECCEEEEECCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
GGFDRTLRFCFDYDLFFRLAKRRPSGRIRSFLAAFRYHPASKTSTLESVFREENETLWRR
CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
YGRYLYSENQIRNFAHKQTTRDMWNNRIIKLGFYLKILNVSNAIGS
HHHHHHCHHHHHHHHHHHHHHHHHCCCEEEEEHEEEEEEHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11557893 [H]