Click here to switch to the map view.

The map label for this gene is pimB [H]

Identifier: 78222704

GI number: 78222704

Start: 1687254

End: 1688375

Strand: Direct

Name: pimB [H]

Synonym: Gmet_1492

Alternate gene names: 78222704

Gene position: 1687254-1688375 (Clockwise)

Preceding gene: 78222703

Following gene: 78222705

Centisome position: 42.21

GC content: 49.02

Gene sequence:

>1122_bases
ATGAGAATTGCTTACATAGTCACAGATCTTGGACGTGGAGGGACGCAAGGCTGGGTGGAGTATTCCGCCTTGGAACTGGT
GAAATATGGCCATTCCATTACCATAATAGCCGAAAACACGCCGCACGACAGGAAAGCAAAATTTGAAGAACATGGAATAG
TAGTGCGCGCCTTTGAGAGACCTGCAAGCCGCTCAGATTATTGCCGGATAATTCAGGAAGCTCGCGCCGACGTAATCCAT
TTGCATGTTTGGGAACGGTTTTCCGAACTGATTCAGTTGCGCGAACTATGCAATGTCCCTGTTTTGCTCTCGTACCACAG
TGTTCCTAAAATCGGTTGGAAACAGTGGGTTGCAAGGATAATCAAGCCATCTGTCAACCACTGGGATATGTACGACTGGT
TCACTCTAAAACAGGCACGACAGTATATAGATGCTCATATTGGCTGCTGCAAAGCCTCTGCCGGAGGAATCCGCAATAAA
TACTGGCCGTTTATGGGGAAACGGGTTTTTCCCCTTCCCAATGCAATACCTTTTCCCGAAGCGAATATGGCGAGTGTCAT
CAGCGGTCCGCCCAAATTCCTGCAGGTCGGGGCACTGAATGAACGGAAAAATCCGTTTCTGACCTTGAAGGCCTTTCACA
ATATTCAACGTCGCATTTCGGATTCGACCCTTACCTTCGTGGGCGGCGGCCCCCTCTTTGAGGAATTGAAGGGGTATGTT
CACCAGATGGGTGTCGAGAACGTGTTCCTTGTTGGAGAAGTGCAGGATCCGAGCCCCTATTACATGGCAAGCAACATCCT
GGTCCAACCGAGCAGGTCTGAAGGGCTGCCGTATACGCTCATAGAAGGTGCCGGGCGCGGAATGGCGCTTATCGCATCGA
ACGTGGATGGAAATCCGGAAATCTGCATTGCGAAACGGAATGGTCTTCTATTGCCGGATATAAGTGAAAATGCCTTGCAG
GAGGCAATGCTCAATTTGGCACTGAATCATGAAGAAAGAAGCCGAATGGGTAGTTGTGGACGGAGACTCGTCGAAGAGAA
TTTCAGCATGAAGCTGTTCGTAAAAAGGCTTCTCAAAATTTACGAGACAGTAATAGAGCGTAAGCCATGTCCAGCCAGTT
AA

Upstream 100 bases:

>100_bases
CGATACAGCATACTGCGGATCCCAGGATAAACTGGCAGAAATTGATCGATGGATCCTATCCCCATCTTCGCTCCTTTCAA
CGGATATAGCTGGGTCCTCA

Downstream 100 bases:

>100_bases
ATCACGGCACGTTGCCAAAAATTTCGATTGTTACCCCCAGTTACAACCAGGCCCAGTATCTCGAAGCCACCATGAGATCC
ATCCTGGATCAGGGGTATCC

Product: glycosyl transferase, group 1

Products: NA

Alternate protein names: Alpha-D-mannose-alpha-(1-6)-phosphatidylmyo-inositol-mannosyltransferase; Alpha-mannosyltransferase; Alpha-manT; Guanosine diphosphomannose-phosphatidyl-inositol alpha-mannosyltransferase; Phosphatidylinositol alpha-mannosyltransferase; PI alpha-mannosyltransferase [H]

Number of amino acids: Translated: 373; Mature: 373

Protein sequence:

>373_residues
MRIAYIVTDLGRGGTQGWVEYSALELVKYGHSITIIAENTPHDRKAKFEEHGIVVRAFERPASRSDYCRIIQEARADVIH
LHVWERFSELIQLRELCNVPVLLSYHSVPKIGWKQWVARIIKPSVNHWDMYDWFTLKQARQYIDAHIGCCKASAGGIRNK
YWPFMGKRVFPLPNAIPFPEANMASVISGPPKFLQVGALNERKNPFLTLKAFHNIQRRISDSTLTFVGGGPLFEELKGYV
HQMGVENVFLVGEVQDPSPYYMASNILVQPSRSEGLPYTLIEGAGRGMALIASNVDGNPEICIAKRNGLLLPDISENALQ
EAMLNLALNHEERSRMGSCGRRLVEENFSMKLFVKRLLKIYETVIERKPCPAS

Sequences:

>Translated_373_residues
MRIAYIVTDLGRGGTQGWVEYSALELVKYGHSITIIAENTPHDRKAKFEEHGIVVRAFERPASRSDYCRIIQEARADVIH
LHVWERFSELIQLRELCNVPVLLSYHSVPKIGWKQWVARIIKPSVNHWDMYDWFTLKQARQYIDAHIGCCKASAGGIRNK
YWPFMGKRVFPLPNAIPFPEANMASVISGPPKFLQVGALNERKNPFLTLKAFHNIQRRISDSTLTFVGGGPLFEELKGYV
HQMGVENVFLVGEVQDPSPYYMASNILVQPSRSEGLPYTLIEGAGRGMALIASNVDGNPEICIAKRNGLLLPDISENALQ
EAMLNLALNHEERSRMGSCGRRLVEENFSMKLFVKRLLKIYETVIERKPCPAS
>Mature_373_residues
MRIAYIVTDLGRGGTQGWVEYSALELVKYGHSITIIAENTPHDRKAKFEEHGIVVRAFERPASRSDYCRIIQEARADVIH
LHVWERFSELIQLRELCNVPVLLSYHSVPKIGWKQWVARIIKPSVNHWDMYDWFTLKQARQYIDAHIGCCKASAGGIRNK
YWPFMGKRVFPLPNAIPFPEANMASVISGPPKFLQVGALNERKNPFLTLKAFHNIQRRISDSTLTFVGGGPLFEELKGYV
HQMGVENVFLVGEVQDPSPYYMASNILVQPSRSEGLPYTLIEGAGRGMALIASNVDGNPEICIAKRNGLLLPDISENALQ
EAMLNLALNHEERSRMGSCGRRLVEENFSMKLFVKRLLKIYETVIERKPCPAS

Specific function: Catalyzes the addition of a mannose residue from GDP-D- mannose to the position 6 of a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1) to generate phosphatidyl-myo-inositol bearing alpha-1,2- and alpha-1,6-linked mannose resid

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: =2.4.1.57 [H]

Molecular weight: Translated: 42236; Mature: 42236

Theoretical pI: Translated: 8.96; Mature: 8.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIAYIVTDLGRGGTQGWVEYSALELVKYGHSITIIAENTPHDRKAKFEEHGIVVRAFER
CEEEEEEEECCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCHHHCCHHHCCEEEEEECC
PASRSDYCRIIQEARADVIHLHVWERFSELIQLRELCNVPVLLSYHSVPKIGWKQWVARI
CCCCHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHH
IKPSVNHWDMYDWFTLKQARQYIDAHIGCCKASAGGIRNKYWPFMGKRVFPLPNAIPFPE
HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCCCCCCCC
ANMASVISGPPKFLQVGALNERKNPFLTLKAFHNIQRRISDSTLTFVGGGPLFEELKGYV
CCHHHHHCCCHHHEEECCCCCCCCCEEEHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHH
HQMGVENVFLVGEVQDPSPYYMASNILVQPSRSEGLPYTLIEGAGRGMALIASNVDGNPE
HHCCCCCEEEEEEECCCCCCEEECCEEEECCCCCCCCEEEEECCCCCEEEEEECCCCCCC
ICIAKRNGLLLPDISENALQEAMLNLALNHEERSRMGSCGRRLVEENFSMKLFVKRLLKI
EEEEECCCEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
YETVIERKPCPAS
HHHHHCCCCCCCC
>Mature Secondary Structure
MRIAYIVTDLGRGGTQGWVEYSALELVKYGHSITIIAENTPHDRKAKFEEHGIVVRAFER
CEEEEEEEECCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCHHHCCHHHCCEEEEEECC
PASRSDYCRIIQEARADVIHLHVWERFSELIQLRELCNVPVLLSYHSVPKIGWKQWVARI
CCCCHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHH
IKPSVNHWDMYDWFTLKQARQYIDAHIGCCKASAGGIRNKYWPFMGKRVFPLPNAIPFPE
HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCCCCCCCC
ANMASVISGPPKFLQVGALNERKNPFLTLKAFHNIQRRISDSTLTFVGGGPLFEELKGYV
CCHHHHHCCCHHHEEECCCCCCCCCEEEHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHH
HQMGVENVFLVGEVQDPSPYYMASNILVQPSRSEGLPYTLIEGAGRGMALIASNVDGNPE
HHCCCCCEEEEEEECCCCCCEEECCEEEECCCCCCCCEEEEECCCCCEEEEEECCCCCCC
ICIAKRNGLLLPDISENALQEAMLNLALNHEERSRMGSCGRRLVEENFSMKLFVKRLLKI
EEEEECCCEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
YETVIERKPCPAS
HHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]