Click here to switch to the map view.

The map label for this gene is bscR [H]

Identifier: 78222028

GI number: 78222028

Start: 887394

End: 887969

Strand: Direct

Name: bscR [H]

Synonym: Gmet_0808

Alternate gene names: 78222028

Gene position: 887394-887969 (Clockwise)

Preceding gene: 78222027

Following gene: 78222029

Centisome position: 22.2

GC content: 58.33

Gene sequence:

>576_bases
ATGTCGAAAGTTGAAAAGCGCGACGAGATAGTCCGCGCGGCCCTTGAGGTCATCGCCGAGCACGGTTTCCATGGCGCCCC
CATGGCGCTGATCGCCGACCGTGCCGGGGTTGGGGCCGGGACGATCTACCGCTACTTCGAGAACAAGGATGTCTTGATCA
GGGAACTCTATCGGGATATGGAAGGAAGGATCTATCCGTTCATCACCGAGGGGTACGTGGAGGTCAAGGCATTTCGGGAA
CGGTTTATTCATCTCGGTTCGGCACTCCTGCGGTACTTCATCGAAAACCCCCTCGATTTCCGGTACCTGGAGCAGTTCCA
TAATTCTCCGTACGGCCTGGAATACCGCCGGGAACGGCTTCTGGGGGAACGTGAAGGGTGCGACGTCTATCGGGAGTTGT
TTGAAACGGGGATTGCCCAGCAGGTCCTGAAAAATGTCCCCCTGCCAATATTCTTCGCCCTGACCTTCGGTCCCCTCCTC
GCCGTGGCCCGGGACCATATCCTCGGGTTCATTGTGCTGGATGACGCCCTTATCGTCCGGACCATCGAGGCCTGCTGGGA
TGCGGTCAGGCGATAG

Upstream 100 bases:

>100_bases
ACCCCGCGGGAAAAAATAAAATATAGCTGGACACGACTTGGTGGATTGTTTAAAAATGGAATGAACGTTCATTCCGCTAT
TGTGGACAAAGAGGTCTGCC

Downstream 100 bases:

>100_bases
GCTGAATCAAGTTTAGGAATGAACATTCATTCAAATTACCGTGAAGAGGTGTCTATGCAAGCCATGTACAGAACACGACT
GATTACCGTTACGGGGCTTC

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 191; Mature: 190

Protein sequence:

>191_residues
MSKVEKRDEIVRAALEVIAEHGFHGAPMALIADRAGVGAGTIYRYFENKDVLIRELYRDMEGRIYPFITEGYVEVKAFRE
RFIHLGSALLRYFIENPLDFRYLEQFHNSPYGLEYRRERLLGEREGCDVYRELFETGIAQQVLKNVPLPIFFALTFGPLL
AVARDHILGFIVLDDALIVRTIEACWDAVRR

Sequences:

>Translated_191_residues
MSKVEKRDEIVRAALEVIAEHGFHGAPMALIADRAGVGAGTIYRYFENKDVLIRELYRDMEGRIYPFITEGYVEVKAFRE
RFIHLGSALLRYFIENPLDFRYLEQFHNSPYGLEYRRERLLGEREGCDVYRELFETGIAQQVLKNVPLPIFFALTFGPLL
AVARDHILGFIVLDDALIVRTIEACWDAVRR
>Mature_190_residues
SKVEKRDEIVRAALEVIAEHGFHGAPMALIADRAGVGAGTIYRYFENKDVLIRELYRDMEGRIYPFITEGYVEVKAFRER
FIHLGSALLRYFIENPLDFRYLEQFHNSPYGLEYRRERLLGEREGCDVYRELFETGIAQQVLKNVPLPIFFALTFGPLLA
VARDHILGFIVLDDALIVRTIEACWDAVRR

Specific function: Negatively regulates the transcription of the bscR- CYP102A3 operon [H]

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR015893
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 22160; Mature: 22029

Theoretical pI: Translated: 6.04; Mature: 6.04

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKVEKRDEIVRAALEVIAEHGFHGAPMALIADRAGVGAGTIYRYFENKDVLIRELYRDM
CCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHH
EGRIYPFITEGYVEVKAFRERFIHLGSALLRYFIENPLDFRYLEQFHNSPYGLEYRRERL
CCCEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHHH
LGEREGCDVYRELFETGIAQQVLKNVPLPIFFALTFGPLLAVARDHILGFIVLDDALIVR
CCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TIEACWDAVRR
HHHHHHHHHCC
>Mature Secondary Structure 
SKVEKRDEIVRAALEVIAEHGFHGAPMALIADRAGVGAGTIYRYFENKDVLIRELYRDM
CCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHH
EGRIYPFITEGYVEVKAFRERFIHLGSALLRYFIENPLDFRYLEQFHNSPYGLEYRRERL
CCCEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHHH
LGEREGCDVYRELFETGIAQQVLKNVPLPIFFALTFGPLLAVARDHILGFIVLDDALIVR
CCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TIEACWDAVRR
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9308178; 9384377 [H]