| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78222027
Identifier: 78222027
GI number: 78222027
Start: 886500
End: 887312
Strand: Direct
Name: 78222027
Synonym: Gmet_0807
Alternate gene names: NA
Gene position: 886500-887312 (Clockwise)
Preceding gene: 78222026
Following gene: 78222028
Centisome position: 22.18
GC content: 66.79
Gene sequence:
>813_bases ATGGAGGAAGCACTACGTGCCGAGATCGGACGTTTTGTGGCGGAGAGCCCGGAAAACCGCTTCCCTGATGGCAGCGGACC CTACTTCGACGACCCCCTCGTGGGCTTCGCCGCGGCTGACGACCCGCTTTTCACTGACTACAAGCACATCATCGGCGATT TCCACCTGACGCCGGCCGAGCTGCTGGACGGGGCGGCAACGGTTATTGTCTGGATCCTCCCGATTGTGGAGGGGACGCGG ATGAGCAACCGGCTGGAGACAGAATGGCCCTCCCGCAAGTGGGCCTTCACCCGGAGTCACGGCGAGACCCTGAACGGCGC CCTTCGCCGGCATCTGGTGGCGCACCTGGAGGGGATCGGCCACCGGGCCGTGGTGCCCCAGTACGCCCCCGCCTGGAAGG AATTCGCCGATACCCCCGTGGGCATTGCCTCCACCTGGTCCGAGCGCCACGCCGCCTACGCAGCCGGACTCGGTACCTTC AGCCTCTCCGACGGCCTCATCACTGCTCGCGGAATTGCCCACCGGGTGGGGAGCGTCATCACCGACCTGGTGCTTCCTCC CTCTCCCCGCACCACCCCGGACCATCGCCACAACTGCCTCTGGTACCGCGAGGAGACCTGCGGCGTCTGCATCGGCCGCT GCCCCGTGGGGGCCATCACCTTCAACGGCCACGACAAGTCCCGGTGCCGGGATTACGTCTACGGCGCCGTTCCCGAGGCG GTGGGCGAGCGCTACGGTGTCACCCATACCGGTTGCGGGCTCTGCCAGACCCGCGTACCGTGCGAGTCGGCGATACCCCG CGGGAAAAAATAA
Upstream 100 bases:
>100_bases TCGGTTTTTTCCTGAATGGCGTGGTCGGGGTGGCGACGTTACTGCTTTTCGTCACTCTCTACCGTCGGCCCGAGCCGGCA GCAGCATAAAGGAGGTCGAG
Downstream 100 bases:
>100_bases AATATAGCTGGACACGACTTGGTGGATTGTTTAAAAATGGAATGAACGTTCATTCCGCTATTGTGGACAAAGAGGTCTGC CATGTCGAAAGTTGAAAAGC
Product: 4Fe-4S ferredoxin, iron-sulfur binding protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 270; Mature: 270
Protein sequence:
>270_residues MEEALRAEIGRFVAESPENRFPDGSGPYFDDPLVGFAAADDPLFTDYKHIIGDFHLTPAELLDGAATVIVWILPIVEGTR MSNRLETEWPSRKWAFTRSHGETLNGALRRHLVAHLEGIGHRAVVPQYAPAWKEFADTPVGIASTWSERHAAYAAGLGTF SLSDGLITARGIAHRVGSVITDLVLPPSPRTTPDHRHNCLWYREETCGVCIGRCPVGAITFNGHDKSRCRDYVYGAVPEA VGERYGVTHTGCGLCQTRVPCESAIPRGKK
Sequences:
>Translated_270_residues MEEALRAEIGRFVAESPENRFPDGSGPYFDDPLVGFAAADDPLFTDYKHIIGDFHLTPAELLDGAATVIVWILPIVEGTR MSNRLETEWPSRKWAFTRSHGETLNGALRRHLVAHLEGIGHRAVVPQYAPAWKEFADTPVGIASTWSERHAAYAAGLGTF SLSDGLITARGIAHRVGSVITDLVLPPSPRTTPDHRHNCLWYREETCGVCIGRCPVGAITFNGHDKSRCRDYVYGAVPEA VGERYGVTHTGCGLCQTRVPCESAIPRGKK >Mature_270_residues MEEALRAEIGRFVAESPENRFPDGSGPYFDDPLVGFAAADDPLFTDYKHIIGDFHLTPAELLDGAATVIVWILPIVEGTR MSNRLETEWPSRKWAFTRSHGETLNGALRRHLVAHLEGIGHRAVVPQYAPAWKEFADTPVGIASTWSERHAAYAAGLGTF SLSDGLITARGIAHRVGSVITDLVLPPSPRTTPDHRHNCLWYREETCGVCIGRCPVGAITFNGHDKSRCRDYVYGAVPEA VGERYGVTHTGCGLCQTRVPCESAIPRGKK
Specific function: Unknown
COG id: COG1600
COG function: function code C; Uncharacterized Fe-S protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29589; Mature: 29589
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEEALRAEIGRFVAESPENRFPDGSGPYFDDPLVGFAAADDPLFTDYKHIIGDFHLTPAE CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHCCCCCCHHH LLDGAATVIVWILPIVEGTRMSNRLETEWPSRKWAFTRSHGETLNGALRRHLVAHLEGIG HHCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCC HRAVVPQYAPAWKEFADTPVGIASTWSERHAAYAAGLGTFSLSDGLITARGIAHRVGSVI CCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHH TDLVLPPSPRTTPDHRHNCLWYREETCGVCIGRCPVGAITFNGHDKSRCRDYVYGAVPEA HHHHCCCCCCCCCCCCCCEEEEECCCCCEEEECCCCEEEEECCCCHHHHHHHHHHCCHHH VGERYGVTHTGCGLCQTRVPCESAIPRGKK HHHHCCCCCCCCCHHCCCCCHHHCCCCCCC >Mature Secondary Structure MEEALRAEIGRFVAESPENRFPDGSGPYFDDPLVGFAAADDPLFTDYKHIIGDFHLTPAE CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHCCCCCCHHH LLDGAATVIVWILPIVEGTRMSNRLETEWPSRKWAFTRSHGETLNGALRRHLVAHLEGIG HHCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCC HRAVVPQYAPAWKEFADTPVGIASTWSERHAAYAAGLGTFSLSDGLITARGIAHRVGSVI CCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHH TDLVLPPSPRTTPDHRHNCLWYREETCGVCIGRCPVGAITFNGHDKSRCRDYVYGAVPEA HHHHCCCCCCCCCCCCCCEEEEECCCCCEEEECCCCEEEEECCCCHHHHHHHHHHCCHHH VGERYGVTHTGCGLCQTRVPCESAIPRGKK HHHHCCCCCCCCCHHCCCCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA