| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is ppsA [H]
Identifier: 78221990
GI number: 78221990
Start: 845540
End: 847942
Strand: Reverse
Name: ppsA [H]
Synonym: Gmet_0770
Alternate gene names: 78221990
Gene position: 847942-845540 (Counterclockwise)
Preceding gene: 78221991
Following gene: 78221989
Centisome position: 21.21
GC content: 66.21
Gene sequence:
>2403_bases ATGACCTGGATCCGCTGGTTCTCCGCAATCACCATCGACGACGTCCCCCTCGTGGGAGGTAAAAACGCCTCCCTCGGGGA GATGTACCGGGAACTCCGCCCCCTGGGGGTGAAGATACCCAACGGCTTCGCCATAACCGCGGAGGCCTACTGGTACCTGG TCCGCTCTGCCGGGGTGCTGGACGAGATGCGGCGGACCCTGGCGAAACTCCACAAGGAGGACGTGGACGACCTGGCCTTG CGAGGCCACCGGGTGCGGGAGCTTATCTGCGGCGCGCCGCTCCCGGCGGACCTGGCGGCGGAAATCACGGCCGCCTACCG CCGGCTCTGCATTGAGTACGGCGAGAACTGCGATGTGGCGGTCCGCAGCTCCGCCACCGCCGAGGACCTCCCCACCGCCT CCTTCGCCGGTCAGCAGGAAACCTACCTGAATATCCGGGGCGAGGTGCAGCTCCTGGACGCCTGCCGCCGCTGCTTTGCA TCGCTCTTCACCGACCGGGCCATCTCCTACCGCATCGACCAGGGGTTCGACCACTTCAAGGTGGGGCTCTCCATCGGGGT CATGAAGATGGTCCGGTCGGACCGGGCCTCCAGCGGCGTCATCTTCACCCTCGACACCGAGACCGGCTTCCGGGACACGG TGCTGGTCACCGGCGCCTGGGGCCTGGGGGAGAACGTGGTCCAGGGGGCCGTGAACCCCGACGAGTTCACCGTCTTCAAG CCGCCCCTCCGCCAGGGATTCCGCCCCATCGTCCGGCGCAAGCTCGGTGAGAAGAAGATCAAGATGATCTACGGCACTGG CACCTCCAAACACCTGACGAAGAACGTGGAGGTGCCCAGGGAGGAGCGGCGCCACTACTGCCTGGCCGACGCAGAGGTGC TGGAGCTGGCCCGCCAGGCCCTTCTCATCGAAGAGCACTACTCGAAGCGGGCCGGCCACGACGTCCCCATGGACATCGAA TGGGCCAAGGACGGGGTTTCGGGGGAGCTCTTCATCGTCCAGGCCCGCCCCGAGACGGTGGAATCCCAGAAGCGGCTCGA CTTTCTCGAAACATATGTTCTGGAGCGCAAGGGGGAAGTCCTTGTCACCGGCACCAGCGTCGGCGGGAAGATCGCCGTCG GCCCGGCCCGGGTCATCACCGATGTCCACAAATTGAACGAATTCAGCCCCGGCGAGGTCCTGGTGGCCGACACCACCACT CCTGACTGGGAGCCGGTCATGAAGACCGCCGCCGCCATCGTCACCAACAAGGGGGGGCGTACCTGCCATGCGGCCATCGT GAGCCGCGAGCTGGGGATTCCGTCGGTGGTGGGGACCGGCGACGGCACCGGGCGGATCGCCCCGGGCCGGGAGATCACCG TCTCCTGCGCCGAAGGGGACGTGGGGCGTATTTACGACGGCGCGCTCCCTTTCCGGATTGAGCGGGTGGACCTCTCGGGG ATGCGCCGCCCCCGGACCAGGATCATGATGAACCTGGGGAACCCGGAGGAGGCCTTCTCCCTCTGCCGGATCCCCAACGA CGGCGTGGGGCTCGCCCGGATGGAGTTCATCATCACCAACCACATCAAGGTCCACCCCATGGCCCTCGTTCACCCGGAGC GGGTAGAGGACGAGGCGTCCCGCCGCGAGATCGGGCGCCTCACCGCCGGCTACCCCGATCCGCCCGCCTACTTCGTGGAG AAGCTGGCCGAGGGGATCGGCACCATCGCCGCTGCCTTCCACCCGAAGCCGGTCATTGTCCGGATGAGCGATTTCAAGTC CAACGAGTACGCCTCGCTCTTGGGGGGGCGGGCCTTCGAGCCCGCTGAGGAGAACCCCATGATCGGCTTCCGGGGGGCTT CGCGCTACTACGACGAGCGGTACCGGGAGGGGTTCGCCCTGGAGTGCCGGGCGCTGAAACGGGTGCGGGACGAAATGGGG CTTGTGAACGTGATCCCCATGATCCCCTTCTGCCGGCGGATCGTGGAGGCGGAGAAGGTCCTGGCGGAGATGGCGGCAAA CGGCCTCGTGCGGGGAGAGAACGGCCTCGGTGTCTACGTCATGTGCGAGATACCGAACAACGTCATCATGATCGACGAAT TCTCGCAGCTCTTCGACGGCTTCTCCATCGGCTCCAACGACCTGACCCAGCTCACCCTCGGCATCGACCGGGACTCGGCC CTGGTGGCCCACGTCTTCGACGAGCGGGACCCGGGGGTCATGCGCCTCATCGCCAGCGTGGTGGAAGGGGCGCGGCGCAA TCACCGCCACAGCGGCATCTGCGGCCAGGCCCCCAGCGACTACCCGGAGTTCGCCGCCTTCCTGGTTCGGGAGGGGATCG ACTCCATCTCGTTAAATCCGGACTCGATCCTGAAGATCACCTTGCGGGTGCTGGAGATGGAAAAGGAGATAGAGAAACCA TGA
Upstream 100 bases:
>100_bases CCCGGCCTACGGCCACCCTCTCCCCGAGGGAGGGGTTTGGTGTCTCCCCTCGCCCTCGGTGAGAGGGGCTGGGGGCGAGG GGCAACAGGGAGGTTCCCCC
Downstream 100 bases:
>100_bases ACCGCGACTGGACCCTCATCGAGACCCTCCTCCCCCAGGACACCAATTCTGCGGGAAACATCTTCGGCGGGGTGCTCATG AGCCTCATGGACAAGGCGGC
Product: phosphoenolpyruvate synthase
Products: NA
Alternate protein names: PEP synthase; Pyruvate, water dikinase [H]
Number of amino acids: Translated: 800; Mature: 799
Protein sequence:
>800_residues MTWIRWFSAITIDDVPLVGGKNASLGEMYRELRPLGVKIPNGFAITAEAYWYLVRSAGVLDEMRRTLAKLHKEDVDDLAL RGHRVRELICGAPLPADLAAEITAAYRRLCIEYGENCDVAVRSSATAEDLPTASFAGQQETYLNIRGEVQLLDACRRCFA SLFTDRAISYRIDQGFDHFKVGLSIGVMKMVRSDRASSGVIFTLDTETGFRDTVLVTGAWGLGENVVQGAVNPDEFTVFK PPLRQGFRPIVRRKLGEKKIKMIYGTGTSKHLTKNVEVPREERRHYCLADAEVLELARQALLIEEHYSKRAGHDVPMDIE WAKDGVSGELFIVQARPETVESQKRLDFLETYVLERKGEVLVTGTSVGGKIAVGPARVITDVHKLNEFSPGEVLVADTTT PDWEPVMKTAAAIVTNKGGRTCHAAIVSRELGIPSVVGTGDGTGRIAPGREITVSCAEGDVGRIYDGALPFRIERVDLSG MRRPRTRIMMNLGNPEEAFSLCRIPNDGVGLARMEFIITNHIKVHPMALVHPERVEDEASRREIGRLTAGYPDPPAYFVE KLAEGIGTIAAAFHPKPVIVRMSDFKSNEYASLLGGRAFEPAEENPMIGFRGASRYYDERYREGFALECRALKRVRDEMG LVNVIPMIPFCRRIVEAEKVLAEMAANGLVRGENGLGVYVMCEIPNNVIMIDEFSQLFDGFSIGSNDLTQLTLGIDRDSA LVAHVFDERDPGVMRLIASVVEGARRNHRHSGICGQAPSDYPEFAAFLVREGIDSISLNPDSILKITLRVLEMEKEIEKP
Sequences:
>Translated_800_residues MTWIRWFSAITIDDVPLVGGKNASLGEMYRELRPLGVKIPNGFAITAEAYWYLVRSAGVLDEMRRTLAKLHKEDVDDLAL RGHRVRELICGAPLPADLAAEITAAYRRLCIEYGENCDVAVRSSATAEDLPTASFAGQQETYLNIRGEVQLLDACRRCFA SLFTDRAISYRIDQGFDHFKVGLSIGVMKMVRSDRASSGVIFTLDTETGFRDTVLVTGAWGLGENVVQGAVNPDEFTVFK PPLRQGFRPIVRRKLGEKKIKMIYGTGTSKHLTKNVEVPREERRHYCLADAEVLELARQALLIEEHYSKRAGHDVPMDIE WAKDGVSGELFIVQARPETVESQKRLDFLETYVLERKGEVLVTGTSVGGKIAVGPARVITDVHKLNEFSPGEVLVADTTT PDWEPVMKTAAAIVTNKGGRTCHAAIVSRELGIPSVVGTGDGTGRIAPGREITVSCAEGDVGRIYDGALPFRIERVDLSG MRRPRTRIMMNLGNPEEAFSLCRIPNDGVGLARMEFIITNHIKVHPMALVHPERVEDEASRREIGRLTAGYPDPPAYFVE KLAEGIGTIAAAFHPKPVIVRMSDFKSNEYASLLGGRAFEPAEENPMIGFRGASRYYDERYREGFALECRALKRVRDEMG LVNVIPMIPFCRRIVEAEKVLAEMAANGLVRGENGLGVYVMCEIPNNVIMIDEFSQLFDGFSIGSNDLTQLTLGIDRDSA LVAHVFDERDPGVMRLIASVVEGARRNHRHSGICGQAPSDYPEFAAFLVREGIDSISLNPDSILKITLRVLEMEKEIEKP >Mature_799_residues TWIRWFSAITIDDVPLVGGKNASLGEMYRELRPLGVKIPNGFAITAEAYWYLVRSAGVLDEMRRTLAKLHKEDVDDLALR GHRVRELICGAPLPADLAAEITAAYRRLCIEYGENCDVAVRSSATAEDLPTASFAGQQETYLNIRGEVQLLDACRRCFAS LFTDRAISYRIDQGFDHFKVGLSIGVMKMVRSDRASSGVIFTLDTETGFRDTVLVTGAWGLGENVVQGAVNPDEFTVFKP PLRQGFRPIVRRKLGEKKIKMIYGTGTSKHLTKNVEVPREERRHYCLADAEVLELARQALLIEEHYSKRAGHDVPMDIEW AKDGVSGELFIVQARPETVESQKRLDFLETYVLERKGEVLVTGTSVGGKIAVGPARVITDVHKLNEFSPGEVLVADTTTP DWEPVMKTAAAIVTNKGGRTCHAAIVSRELGIPSVVGTGDGTGRIAPGREITVSCAEGDVGRIYDGALPFRIERVDLSGM RRPRTRIMMNLGNPEEAFSLCRIPNDGVGLARMEFIITNHIKVHPMALVHPERVEDEASRREIGRLTAGYPDPPAYFVEK LAEGIGTIAAAFHPKPVIVRMSDFKSNEYASLLGGRAFEPAEENPMIGFRGASRYYDERYREGFALECRALKRVRDEMGL VNVIPMIPFCRRIVEAEKVLAEMAANGLVRGENGLGVYVMCEIPNNVIMIDEFSQLFDGFSIGSNDLTQLTLGIDRDSAL VAHVFDERDPGVMRLIASVVEGARRNHRHSGICGQAPSDYPEFAAFLVREGIDSISLNPDSILKITLRVLEMEKEIEKP
Specific function: Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate [H]
COG id: COG0574
COG function: function code G; Phosphoenolpyruvate synthase/pyruvate phosphate dikinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PEP-utilizing enzyme family [H]
Homologues:
Organism=Escherichia coli, GI1787994, Length=794, Percent_Identity=52.1410579345088, Blast_Score=837, Evalue=0.0, Organism=Escherichia coli, GI1789193, Length=413, Percent_Identity=28.0871670702179, Blast_Score=103, Evalue=3e-23, Organism=Escherichia coli, GI1788756, Length=417, Percent_Identity=24.7002398081535, Blast_Score=103, Evalue=6e-23, Organism=Escherichia coli, GI48994992, Length=391, Percent_Identity=25.8312020460358, Blast_Score=99, Evalue=8e-22, Organism=Escherichia coli, GI1788726, Length=391, Percent_Identity=26.8542199488491, Blast_Score=95, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17564524, Length=233, Percent_Identity=27.8969957081545, Blast_Score=75, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR008279 - InterPro: IPR006319 - InterPro: IPR018274 - InterPro: IPR023151 - InterPro: IPR000121 - InterPro: IPR002192 - InterPro: IPR015813 [H]
Pfam domain/function: PF00391 PEP-utilizers; PF02896 PEP-utilizers_C; PF01326 PPDK_N [H]
EC number: =2.7.9.2 [H]
Molecular weight: Translated: 88596; Mature: 88465
Theoretical pI: Translated: 6.03; Mature: 6.03
Prosite motif: PS00370 PEP_ENZYMES_PHOS_SITE ; PS00742 PEP_ENZYMES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTWIRWFSAITIDDVPLVGGKNASLGEMYRELRPLGVKIPNGFAITAEAYWYLVRSAGVL CCHHHEEEEEEECCCCCCCCCCCCHHHHHHHHCCCCEECCCCEEEEHHHHHHHHHHCCHH DEMRRTLAKLHKEDVDDLALRGHRVRELICGAPLPADLAAEITAAYRRLCIEYGENCDVA HHHHHHHHHHHHCCHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCEE VRSSATAEDLPTASFAGQQETYLNIRGEVQLLDACRRCFASLFTDRAISYRIDQGFDHFK EECCCCHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCHHEEEECCCCCHHH VGLSIGVMKMVRSDRASSGVIFTLDTETGFRDTVLVTGAWGLGENVVQGAVNPDEFTVFK HHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCHHHHCCCCCCCEEEEC PPLRQGFRPIVRRKLGEKKIKMIYGTGTSKHLTKNVEVPREERRHYCLADAEVLELARQA CHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHCCCCCCHHHCCCEEECCHHHHHHHHHH LLIEEHYSKRAGHDVPMDIEWAKDGVSGELFIVQARPETVESQKRLDFLETYVLERKGEV HHHHHHHHHHCCCCCCCEEHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCE LVTGTSVGGKIAVGPARVITDVHKLNEFSPGEVLVADTTTPDWEPVMKTAAAIVTNKGGR EEEECCCCCEEEECHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCC TCHAAIVSRELGIPSVVGTGDGTGRIAPGREITVSCAEGDVGRIYDGALPFRIERVDLSG EEHHHHHHHCCCCCEEEECCCCCCCCCCCCEEEEEECCCCCCCEECCCCCEEEEEECCCC MRRPRTRIMMNLGNPEEAFSLCRIPNDGVGLARMEFIITNHIKVHPMALVHPERVEDEAS CCCCCEEEEEECCCHHHHHHHHCCCCCCCCHHHEEEEEECCEEEEEEEEECCHHHCCHHH RREIGRLTAGYPDPPAYFVEKLAEGIGTIAAAFHPKPVIVRMSDFKSNEYASLLGGRAFE HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHCCCCCC PAEENPMIGFRGASRYYDERYREGFALECRALKRVRDEMGLVNVIPMIPFCRRIVEAEKV CCCCCCEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH LAEMAANGLVRGENGLGVYVMCEIPNNVIMIDEFSQLFDGFSIGSNDLTQLTLGIDRDSA HHHHHHCCEEECCCCCEEEEEEECCCCEEEEECHHHHHCCCCCCCCCCEEEEEECCCCCC LVAHVFDERDPGVMRLIASVVEGARRNHRHSGICGQAPSDYPEFAAFLVREGIDSISLNP EEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCH DSILKITLRVLEMEKEIEKP HHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TWIRWFSAITIDDVPLVGGKNASLGEMYRELRPLGVKIPNGFAITAEAYWYLVRSAGVL CHHHEEEEEEECCCCCCCCCCCCHHHHHHHHCCCCEECCCCEEEEHHHHHHHHHHCCHH DEMRRTLAKLHKEDVDDLALRGHRVRELICGAPLPADLAAEITAAYRRLCIEYGENCDVA HHHHHHHHHHHHCCHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCEE VRSSATAEDLPTASFAGQQETYLNIRGEVQLLDACRRCFASLFTDRAISYRIDQGFDHFK EECCCCHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCHHEEEECCCCCHHH VGLSIGVMKMVRSDRASSGVIFTLDTETGFRDTVLVTGAWGLGENVVQGAVNPDEFTVFK HHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCHHHHCCCCCCCEEEEC PPLRQGFRPIVRRKLGEKKIKMIYGTGTSKHLTKNVEVPREERRHYCLADAEVLELARQA CHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHCCCCCCHHHCCCEEECCHHHHHHHHHH LLIEEHYSKRAGHDVPMDIEWAKDGVSGELFIVQARPETVESQKRLDFLETYVLERKGEV HHHHHHHHHHCCCCCCCEEHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCE LVTGTSVGGKIAVGPARVITDVHKLNEFSPGEVLVADTTTPDWEPVMKTAAAIVTNKGGR EEEECCCCCEEEECHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCC TCHAAIVSRELGIPSVVGTGDGTGRIAPGREITVSCAEGDVGRIYDGALPFRIERVDLSG EEHHHHHHHCCCCCEEEECCCCCCCCCCCCEEEEEECCCCCCCEECCCCCEEEEEECCCC MRRPRTRIMMNLGNPEEAFSLCRIPNDGVGLARMEFIITNHIKVHPMALVHPERVEDEAS CCCCCEEEEEECCCHHHHHHHHCCCCCCCCHHHEEEEEECCEEEEEEEEECCHHHCCHHH RREIGRLTAGYPDPPAYFVEKLAEGIGTIAAAFHPKPVIVRMSDFKSNEYASLLGGRAFE HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHCCCCCC PAEENPMIGFRGASRYYDERYREGFALECRALKRVRDEMGLVNVIPMIPFCRRIVEAEKV CCCCCCEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH LAEMAANGLVRGENGLGVYVMCEIPNNVIMIDEFSQLFDGFSIGSNDLTQLTLGIDRDSA HHHHHHCCEEECCCCCEEEEEEECCCCEEEEECHHHHHCCCCCCCCCCEEEEEECCCCCC LVAHVFDERDPGVMRLIASVVEGARRNHRHSGICGQAPSDYPEFAAFLVREGIDSISLNP EEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCH DSILKITLRVLEMEKEIEKP HHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]