| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
Click here to switch to the map view.
The map label for this gene is crp [C]
Identifier: 78221970
GI number: 78221970
Start: 824509
End: 825225
Strand: Reverse
Name: crp [C]
Synonym: Gmet_0750
Alternate gene names: 78221970
Gene position: 825225-824509 (Counterclockwise)
Preceding gene: 78221971
Following gene: 78221969
Centisome position: 20.64
GC content: 56.21
Gene sequence:
>717_bases ATGAACTCCAAGAATCCACGTACAACCATACCGGCCCCTCTCCAATCGATTCTGAGCGCCATTCCGCTCTTTGCCCCCCT CCCACCCGATGACATCAATACGTTAAGCAAGCTCATTGAGATCCAGGTCTTTCCGAAAAATCGCACCATCCTTCATGAAG CCGATACAGCCAACTACATGTACCTCGTCCTTGCGGGAAAAGTGCGGGTAGTCCAGCACAGCAACGACGGCACGGAACAG GTCCTTGCCATTCATCGCAAGGGGGCGTTTTTCGGCGAAATGGCCCTCCTTGACGGCCGCACGTCTCCGGCAACGCTCAT CGCCCACGAAGACGCCACCGTCGGCCTCATTGCCCGGACAGCCTTTGAAAACCAGATTCTCACCAACGACCGGATGCTGC GGCAGATCATCAGCGTGCTTTGTTCGCGGCTGCGCGAATCATGGTTCCTCATGAAGCTGTCACGCTTTTCCTCCGCCGAG CAGAAGGTCAGGGGAGTCCTCAAATATCTCGGAACCCAGTATGGCGTGGACGATTCTCGTGGCAAAATTCTCAGCATCAA GCTAACCCACCGCACCGTCGCCGGTTACGCATCGGTATCCCGGGAGACGGCAAGCCGCATTTTGGGCCGCTTCTCCCGTG CTGGAGAGATCGAACTCCTCGCCAGCAGAAGAATGCTCCTCAAACCTACCCTCTTTCTCAATCCCCCGTTTTTGTGA
Upstream 100 bases:
>100_bases AGCCCCTCCCCTCTTTTTTTGTCTGTTACCCTGTTACGTGTATTCATCTTCAAGGCTGCTATACTTGCATTATAATCCGG CAACCGACAGGTATCTCACC
Downstream 100 bases:
>100_bases TTCAAGTCACATTTTTTCCCCTCAAGTTATCCATCCTGACGCCGAAATGTAGTAACAGATAAAGAAGAAAGTTTCCGAAA GGGCAAACTTCGGGTAACCG
Product: Crp/FNR family transcriptional regulator
Products: NA
Alternate protein names: Crp/FNR Family Transcriptional Regulator; Crp/Fnr Family Transcriptional Regulator; Transcriptional Regulator; CRP/FNR Family Transcriptional Regulator; Crp Family Transcriptional Regulator; Catabolite Gene Activator; CRP Family Transcriptional Regulator; Transcriptional Regulatory Protein; Cyclic AMP Receptor Protein; Pyruvate Formate-Lyase 1-Activating; Crp-Family Transcriptional Regulator; Transcription Regulator; CAMP-Bindin Transcriptional Regulator; Transcription Regulator Crp Family; Pyruvate-Formate-Lyase-Activating; Global Nitrogen Regulator NtcA; Response Regulator Receiver; Transcriptional Regulatory Protein Crp Family; CAMP-Dependent Transcriptional Regulator; Crp Family Regulatory Protein
Number of amino acids: Translated: 238; Mature: 238
Protein sequence:
>238_residues MNSKNPRTTIPAPLQSILSAIPLFAPLPPDDINTLSKLIEIQVFPKNRTILHEADTANYMYLVLAGKVRVVQHSNDGTEQ VLAIHRKGAFFGEMALLDGRTSPATLIAHEDATVGLIARTAFENQILTNDRMLRQIISVLCSRLRESWFLMKLSRFSSAE QKVRGVLKYLGTQYGVDDSRGKILSIKLTHRTVAGYASVSRETASRILGRFSRAGEIELLASRRMLLKPTLFLNPPFL
Sequences:
>Translated_238_residues MNSKNPRTTIPAPLQSILSAIPLFAPLPPDDINTLSKLIEIQVFPKNRTILHEADTANYMYLVLAGKVRVVQHSNDGTEQ VLAIHRKGAFFGEMALLDGRTSPATLIAHEDATVGLIARTAFENQILTNDRMLRQIISVLCSRLRESWFLMKLSRFSSAE QKVRGVLKYLGTQYGVDDSRGKILSIKLTHRTVAGYASVSRETASRILGRFSRAGEIELLASRRMLLKPTLFLNPPFL >Mature_238_residues MNSKNPRTTIPAPLQSILSAIPLFAPLPPDDINTLSKLIEIQVFPKNRTILHEADTANYMYLVLAGKVRVVQHSNDGTEQ VLAIHRKGAFFGEMALLDGRTSPATLIAHEDATVGLIARTAFENQILTNDRMLRQIISVLCSRLRESWFLMKLSRFSSAE QKVRGVLKYLGTQYGVDDSRGKILSIKLTHRTVAGYASVSRETASRILGRFSRAGEIELLASRRMLLKPTLFLNPPFL
Specific function: This Protein Complexes With Cyclic AMP And Binds To Specific DNA Sites Near The Promoter To Regulate The Transcription Of Several Catabolite-Sensitive Operons. The Protein Induces A Severe Bend In The DNA. Acts As A Negative Regulator Of Its Own Synthesi
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26544; Mature: 26544
Theoretical pI: Translated: 10.68; Mature: 10.68
Prosite motif: PS50042 CNMP_BINDING_3 ; PS51063 HTH_CRP_2 ; PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSKNPRTTIPAPLQSILSAIPLFAPLPPDDINTLSKLIEIQVFPKNRTILHEADTANYM CCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHEEEEECCCCEEEEECCCCCEE YLVLAGKVRVVQHSNDGTEQVLAIHRKGAFFGEMALLDGRTSPATLIAHEDATVGLIART EEEEECEEEEEEECCCCHHHHHHHHHCCCCHHHHHEECCCCCCEEEEEECCCCEEHHHHH AFENQILTNDRMLRQIISVLCSRLRESWFLMKLSRFSSAEQKVRGVLKYLGTQYGVDDSR HHHCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCC GKILSIKLTHRTVAGYASVSRETASRILGRFSRAGEIELLASRRMLLKPTLFLNPPFL CCEEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHCCCHHHHCCEEECCCCCC >Mature Secondary Structure MNSKNPRTTIPAPLQSILSAIPLFAPLPPDDINTLSKLIEIQVFPKNRTILHEADTANYM CCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHEEEEECCCCEEEEECCCCCEE YLVLAGKVRVVQHSNDGTEQVLAIHRKGAFFGEMALLDGRTSPATLIAHEDATVGLIART EEEEECEEEEEEECCCCHHHHHHHHHCCCCHHHHHEECCCCCCEEEEEECCCCEEHHHHH AFENQILTNDRMLRQIISVLCSRLRESWFLMKLSRFSSAEQKVRGVLKYLGTQYGVDDSR HHHCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCC GKILSIKLTHRTVAGYASVSRETASRILGRFSRAGEIELLASRRMLLKPTLFLNPPFL CCEEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHCCCHHHHCCEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA