| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
Click here to switch to the map view.
The map label for this gene is 78221969
Identifier: 78221969
GI number: 78221969
Start: 822514
End: 824277
Strand: Reverse
Name: 78221969
Synonym: Gmet_0749
Alternate gene names: NA
Gene position: 824277-822514 (Counterclockwise)
Preceding gene: 78221970
Following gene: 78221962
Centisome position: 20.62
GC content: 62.41
Gene sequence:
>1764_bases ATGCGCTGCACGAAACGAGTTTGTGGAAAGATCACCCTTCACCTTGGCACCCTCGGCATCCTCTGCCTGGCAGCGGGAAT GGCCGGTGCCGCACCCCCTCCCCAGAAGTTCGTAACCGATGAGCTCCTTGTCCAGTTCAAGGCTGGCGTCCACAAGGCCA ATGCCGACACCGTCCTCAAGGGAGCCGGCGCCCGGGAAGCCGAGGAAATCGCTCCGATCCGGGTAAAGAGGATCAAGGTC CCTGCTGCTGCCCGGGCAAAGGTCAAGGCTGCTCTGGCCAAGAATCCCCACGTAACGTTCGTCGAAGAGAATTACCTGGC TGAGCAGACAATGGTTCCCAACGATCCCTCCTACGCCTCCCAGTGGCATCTCCCCAAGATTGCCGCTCCGGCGGGATGGG ACATCTCCACCGGCTCCAGTTCCGTTGACATCGCCATCCTGGACTCGGGCGTCGATCCATCTCACCCGGACCTGGCCGGC AAGCTTCTCCCCGGTTTCAACTTTGTCTTCAACAACACCGATACCCACGATGTGACCGGGCACGGGACAAAGGTCGCAGG CTCGGCCGGGGCCATGGGTAATAACGGCGCCGGGGTTGCCGGCGTGGCGTGGCAGAACCAGATCATGCCCCTGGTGATCG CGGATTCCACCGGCTACGCTACCTACTCGCGCATGGCCAGTGCCATCACCTACGCCGCCGATCATGGGGTCCGCATCATC AATCTCAGCTACGGCGGCTCCACCAGTTCCTCGACTCTCCAGAATGCCGTGAACTACGCCTGGAACAAAGGAGCCATTGT CTTTGCCTCGGCAGCCAACTACAACACGAGCACCCCCTACTATCCGGCCGCCTGCACCAACGCCGTGTCGGTGGCGGCCA CCGACGCCAACGACGCCAAGGCGAGCTTTTCCAACTACGGCTCCACCATCGATATCGCGGCCCCCGGCGTCTCCATCCTC ACCACCGCCAACGGCGGCGGCTATGCGAGCGTGAGCGGCACCTCCTTCTCCTCTCCCATCGCGGCGGGGCTCGGCGCGCT GATCCTCTCCGTTAACCCGACCCTGACCAATGCCCAGGTGGTGGACATCATCACCAAAAATGCCGACGACATCGGCACCC CCGGCTTCGATCAGTACTTCGGCTACGGCCGGATCAACGTCCTCAAGAGCCTCACGGCTGCCCAGAATGCAGTGCCGGTC GGCGACACAACTGCCCCGACCGCATCGATCACCTCCCCCGCGAGTTCCAGTATCGTGAAAGGAAACGCGTCGGTGGCGGT GGCGGCTTCTGACAACGTCGGCGTGGCCAAGGTGGAGCTCCGCATCAACGGCGCCCCCTTCGCCACGGCAACCACCGCGC CCTACGCCTTCTCGTGGGACACCACCACCACGGCGGACGGCTCCTACACCCTGGAGGCCGTGGCCTTCGACGGCGCGGGA AACATGGGGCAATCAAGCGCTGTTTCGGTCAAGGTTTCAAACACTCCCGACACCATCGCCCCGACCGTCGCCATCACCTC CCCGGCCAACGGCGCAAAGGTCGGGACCAGTGCAACGATCACCATCACCGCCGGCGACAATGTGGGGGTAAGCCGCATCG AGCTCTACATTGACGGCAAGCTGGCAACCAGCAAAACAGGCGTCACCAGCCTGTCTTACAGCTGGAATACGCGAAAAATC GCTACCGGTGCCCACACCATACTGTCCAAAGCCTTCGATGCCGCCGGCAACACCACAACCACTTCCATAACGGTTTACAA GTAA
Upstream 100 bases:
>100_bases GGTCAGGATAGCCGGGTTGTCGAAGAGCAACGCCCGCCTTCCATAGGTACGGGGGTCTGTTTCTGAGGTAGGAAGCAAAC TCAACCCATGGAGGTGGCGC
Downstream 100 bases:
>100_bases CGCCGCTTCGACCACTATTCAGAACAAAGGGGACAGCCAATTGACTGTCCCCTTTCTCATTTCATCCCCAGGCGCACGAA GGGGAGACAGCGCGTGCCGT
Product: peptidase S8/S53 subtilisin kexin sedolisin
Products: NA
Alternate protein names: Ak.1 protease [H]
Number of amino acids: Translated: 587; Mature: 587
Protein sequence:
>587_residues MRCTKRVCGKITLHLGTLGILCLAAGMAGAAPPPQKFVTDELLVQFKAGVHKANADTVLKGAGAREAEEIAPIRVKRIKV PAAARAKVKAALAKNPHVTFVEENYLAEQTMVPNDPSYASQWHLPKIAAPAGWDISTGSSSVDIAILDSGVDPSHPDLAG KLLPGFNFVFNNTDTHDVTGHGTKVAGSAGAMGNNGAGVAGVAWQNQIMPLVIADSTGYATYSRMASAITYAADHGVRII NLSYGGSTSSSTLQNAVNYAWNKGAIVFASAANYNTSTPYYPAACTNAVSVAATDANDAKASFSNYGSTIDIAAPGVSIL TTANGGGYASVSGTSFSSPIAAGLGALILSVNPTLTNAQVVDIITKNADDIGTPGFDQYFGYGRINVLKSLTAAQNAVPV GDTTAPTASITSPASSSIVKGNASVAVAASDNVGVAKVELRINGAPFATATTAPYAFSWDTTTTADGSYTLEAVAFDGAG NMGQSSAVSVKVSNTPDTIAPTVAITSPANGAKVGTSATITITAGDNVGVSRIELYIDGKLATSKTGVTSLSYSWNTRKI ATGAHTILSKAFDAAGNTTTTSITVYK
Sequences:
>Translated_587_residues MRCTKRVCGKITLHLGTLGILCLAAGMAGAAPPPQKFVTDELLVQFKAGVHKANADTVLKGAGAREAEEIAPIRVKRIKV PAAARAKVKAALAKNPHVTFVEENYLAEQTMVPNDPSYASQWHLPKIAAPAGWDISTGSSSVDIAILDSGVDPSHPDLAG KLLPGFNFVFNNTDTHDVTGHGTKVAGSAGAMGNNGAGVAGVAWQNQIMPLVIADSTGYATYSRMASAITYAADHGVRII NLSYGGSTSSSTLQNAVNYAWNKGAIVFASAANYNTSTPYYPAACTNAVSVAATDANDAKASFSNYGSTIDIAAPGVSIL TTANGGGYASVSGTSFSSPIAAGLGALILSVNPTLTNAQVVDIITKNADDIGTPGFDQYFGYGRINVLKSLTAAQNAVPV GDTTAPTASITSPASSSIVKGNASVAVAASDNVGVAKVELRINGAPFATATTAPYAFSWDTTTTADGSYTLEAVAFDGAG NMGQSSAVSVKVSNTPDTIAPTVAITSPANGAKVGTSATITITAGDNVGVSRIELYIDGKLATSKTGVTSLSYSWNTRKI ATGAHTILSKAFDAAGNTTTTSITVYK >Mature_587_residues MRCTKRVCGKITLHLGTLGILCLAAGMAGAAPPPQKFVTDELLVQFKAGVHKANADTVLKGAGAREAEEIAPIRVKRIKV PAAARAKVKAALAKNPHVTFVEENYLAEQTMVPNDPSYASQWHLPKIAAPAGWDISTGSSSVDIAILDSGVDPSHPDLAG KLLPGFNFVFNNTDTHDVTGHGTKVAGSAGAMGNNGAGVAGVAWQNQIMPLVIADSTGYATYSRMASAITYAADHGVRII NLSYGGSTSSSTLQNAVNYAWNKGAIVFASAANYNTSTPYYPAACTNAVSVAATDANDAKASFSNYGSTIDIAAPGVSIL TTANGGGYASVSGTSFSSPIAAGLGALILSVNPTLTNAQVVDIITKNADDIGTPGFDQYFGYGRINVLKSLTAAQNAVPV GDTTAPTASITSPASSSIVKGNASVAVAASDNVGVAKVELRINGAPFATATTAPYAFSWDTTTTADGSYTLEAVAFDGAG NMGQSSAVSVKVSNTPDTIAPTVAITSPANGAKVGTSATITITAGDNVGVSRIELYIDGKLATSKTGVTSLSYSWNTRKI ATGAHTILSKAFDAAGNTTTTSITVYK
Specific function: Unknown
COG id: COG1404
COG function: function code O; Subtilisin-like serine proteases
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S8 family [H]
Homologues:
Organism=Homo sapiens, GI4505579, Length=389, Percent_Identity=23.1362467866324, Blast_Score=84, Evalue=5e-16, Organism=Homo sapiens, GI76443679, Length=365, Percent_Identity=24.1095890410959, Blast_Score=82, Evalue=2e-15, Organism=Homo sapiens, GI31317307, Length=301, Percent_Identity=25.2491694352159, Blast_Score=67, Evalue=4e-11, Organism=Caenorhabditis elegans, GI71988312, Length=372, Percent_Identity=25, Blast_Score=69, Evalue=8e-12, Organism=Caenorhabditis elegans, GI71988308, Length=372, Percent_Identity=25, Blast_Score=69, Evalue=9e-12, Organism=Caenorhabditis elegans, GI71988315, Length=372, Percent_Identity=25, Blast_Score=68, Evalue=1e-11, Organism=Caenorhabditis elegans, GI71988301, Length=373, Percent_Identity=25.4691689008043, Blast_Score=68, Evalue=1e-11, Organism=Caenorhabditis elegans, GI71988321, Length=372, Percent_Identity=25, Blast_Score=68, Evalue=1e-11, Organism=Caenorhabditis elegans, GI71988297, Length=372, Percent_Identity=25, Blast_Score=68, Evalue=2e-11, Organism=Caenorhabditis elegans, GI71983555, Length=328, Percent_Identity=25.609756097561, Blast_Score=65, Evalue=9e-11, Organism=Saccharomyces cerevisiae, GI6320775, Length=286, Percent_Identity=29.7202797202797, Blast_Score=90, Evalue=9e-19, Organism=Saccharomyces cerevisiae, GI6324576, Length=293, Percent_Identity=27.9863481228669, Blast_Score=89, Evalue=3e-18, Organism=Saccharomyces cerevisiae, GI6319893, Length=314, Percent_Identity=27.0700636942675, Blast_Score=87, Evalue=5e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000209 - InterPro: IPR022398 - InterPro: IPR015500 - InterPro: IPR009020 [H]
Pfam domain/function: PF00082 Peptidase_S8 [H]
EC number: NA
Molecular weight: Translated: 59750; Mature: 59750
Theoretical pI: Translated: 7.98; Mature: 7.98
Prosite motif: PS00136 SUBTILASE_ASP ; PS00137 SUBTILASE_HIS ; PS00138 SUBTILASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRCTKRVCGKITLHLGTLGILCLAAGMAGAAPPPQKFVTDELLVQFKAGVHKANADTVLK CCCHHHHHCEEEEEHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEE GAGAREAEEIAPIRVKRIKVPAAARAKVKAALAKNPHVTFVEENYLAEQTMVPNDPSYAS CCCCCCHHHCCCEEEEEEECCCHHHHHHHHHHCCCCCEEEEECCCCHHCCCCCCCCCCCC QWHLPKIAAPAGWDISTGSSSVDIAILDSGVDPSHPDLAGKLLPGFNFVFNNTDTHDVTG CCCCCEECCCCCCEECCCCCEEEEEEEECCCCCCCCCCHHHHCCCEEEEECCCCCCCCCC HGTKVAGSAGAMGNNGAGVAGVAWQNQIMPLVIADSTGYATYSRMASAITYAADHGVRII CCCEECCCCCCCCCCCCCEEEEEECCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEE NLSYGGSTSSSTLQNAVNYAWNKGAIVFASAANYNTSTPYYPAACTNAVSVAATDANDAK EEECCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHCCCEEEEEECCCCCH ASFSNYGSTIDIAAPGVSILTTANGGGYASVSGTSFSSPIAAGLGALILSVNPTLTNAQV HHHHHCCCEEEEECCCEEEEEECCCCCEEEECCCCCCCHHHHCCEEEEEEECCCCCCCEE VDIITKNADDIGTPGFDQYFGYGRINVLKSLTAAQNAVPVGDTTAPTASITSPASSSIVK EEEEECCCCCCCCCCHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEE GNASVAVAASDNVGVAKVELRINGAPFATATTAPYAFSWDTTTTADGSYTLEAVAFDGAG CCCCEEEEECCCCCEEEEEEEECCCCCEEECCCCEEEECCCCEECCCCEEEEEEEECCCC NMGQSSAVSVKVSNTPDTIAPTVAITSPANGAKVGTSATITITAGDNVGVSRIELYIDGK CCCCCCEEEEEECCCCCCCCCEEEEECCCCCCCCCCEEEEEEEECCCCCCEEEEEEECCE LATSKTGVTSLSYSWNTRKIATGAHTILSKAFDAAGNTTTTSITVYK EEECCCCCEEEEECCCCEEEECHHHHHHHHHHHCCCCCEEEEEEEEC >Mature Secondary Structure MRCTKRVCGKITLHLGTLGILCLAAGMAGAAPPPQKFVTDELLVQFKAGVHKANADTVLK CCCHHHHHCEEEEEHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEE GAGAREAEEIAPIRVKRIKVPAAARAKVKAALAKNPHVTFVEENYLAEQTMVPNDPSYAS CCCCCCHHHCCCEEEEEEECCCHHHHHHHHHHCCCCCEEEEECCCCHHCCCCCCCCCCCC QWHLPKIAAPAGWDISTGSSSVDIAILDSGVDPSHPDLAGKLLPGFNFVFNNTDTHDVTG CCCCCEECCCCCCEECCCCCEEEEEEEECCCCCCCCCCHHHHCCCEEEEECCCCCCCCCC HGTKVAGSAGAMGNNGAGVAGVAWQNQIMPLVIADSTGYATYSRMASAITYAADHGVRII CCCEECCCCCCCCCCCCCEEEEEECCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEE NLSYGGSTSSSTLQNAVNYAWNKGAIVFASAANYNTSTPYYPAACTNAVSVAATDANDAK EEECCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHCCCEEEEEECCCCCH ASFSNYGSTIDIAAPGVSILTTANGGGYASVSGTSFSSPIAAGLGALILSVNPTLTNAQV HHHHHCCCEEEEECCCEEEEEECCCCCEEEECCCCCCCHHHHCCEEEEEEECCCCCCCEE VDIITKNADDIGTPGFDQYFGYGRINVLKSLTAAQNAVPVGDTTAPTASITSPASSSIVK EEEEECCCCCCCCCCHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEE GNASVAVAASDNVGVAKVELRINGAPFATATTAPYAFSWDTTTTADGSYTLEAVAFDGAG CCCCEEEEECCCCCEEEEEEEECCCCCEEECCCCEEEECCCCEECCCCEEEEEEEECCCC NMGQSSAVSVKVSNTPDTIAPTVAITSPANGAKVGTSATITITAGDNVGVSRIELYIDGK CCCCCCEEEEEECCCCCCCCCEEEEECCCCCCCCCCEEEEEEEECCCCCCEEEEEEECCE LATSKTGVTSLSYSWNTRKIATGAHTILSKAFDAAGNTTTTSITVYK EEECCCCCEEEEECCCCEEEECHHHHHHHHHHHCCCCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7993087; 10588904 [H]