| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78221885
Identifier: 78221885
GI number: 78221885
Start: 729288
End: 730163
Strand: Direct
Name: 78221885
Synonym: Gmet_0665
Alternate gene names: NA
Gene position: 729288-730163 (Clockwise)
Preceding gene: 78221884
Following gene: 78221889
Centisome position: 18.24
GC content: 50.46
Gene sequence:
>876_bases GTGTATCTAATGACCAGAACCGTCAACAAGGGGTTCCATGAGTTCCTTCACCGGATCGCTCCCCCGCGCACAGAGGCGGA ATCTCTGAAAACACTCCATAGTTCCGTCGCGGACTTCTTGAGAATCGGCTATGGACTGAATGATTTCATCATAACCGGTT CCTTGCGCAACGGGACGTGTATTAATGGCTGGAGCGGCTACGATTATTTTGCCGTGATGCCAACGGGGAAGTTGAAAGCG GATTCCGTGGCGACGGTTTCGGAGATAAAAAATTATCTGGATTTTCATCTGCAGGATGCCGAAGTGAGAATTCAGTATCC AGGAATAGAGGTGGCCGTTGGTGCTCAGGGGACAACCAAGGTTATCCCGGTCGATTTTGTCACGGAGGCGAACGGACAAA AAATATATGACATGCCGGATGACACCGGCGGGTGGATGAGGACGAGTCCGGACGCCCATGGTGCGTACATAAAAACAATT GAGCAGCGGCTGGGTGTGGGGGGTAGAAATCTCATGCGGCTCATGAAGGCGTGGAAATATTGTGGCGGCGTGCCGATCTC CTCGTTTTATCTGGAGTTAGCAGTAGCCAAATATTTGGAACATGCATCGTCTGTCGTTTATGATGTGGATGTACACGGCG TCTTTCAATATCTATTCAACAATGAAATGGCTCCGATCGAGGATCCGATGGGGGTGTCGGGATGCGTGAACCCTTGTTCA GCGCATTCCGATTACATGACAGTGAAAACGGAACTTACTGCCGCATTCATGCGAGCCGCTAGGGCACTGGAAGCGCGATT GAAATATAATGTCGCTGAAGCGTTCGAATGGTGGCGATTGCTGTATAACGGAAAATTCCCCTCGTATTACCGGTAG
Upstream 100 bases:
>100_bases ACGGCTTTTCTGTTTGCTGACGGTGGTTGGGCGTTAATGTGATGACAAGAAAAATATCGACAGCTGTACGCGCTGCAGAT TATGGAATCCGGGCACCGAG
Downstream 100 bases:
>100_bases TGTTGTAGTATCTCGGGCGGAGTAGACGATGCGTCCCAAACACGAACGGCCCGCCAGGATAACTCGGCGGGCCGTTCGTG TTACCTGGTGCCCGTTGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 291; Mature: 291
Protein sequence:
>291_residues MYLMTRTVNKGFHEFLHRIAPPRTEAESLKTLHSSVADFLRIGYGLNDFIITGSLRNGTCINGWSGYDYFAVMPTGKLKA DSVATVSEIKNYLDFHLQDAEVRIQYPGIEVAVGAQGTTKVIPVDFVTEANGQKIYDMPDDTGGWMRTSPDAHGAYIKTI EQRLGVGGRNLMRLMKAWKYCGGVPISSFYLELAVAKYLEHASSVVYDVDVHGVFQYLFNNEMAPIEDPMGVSGCVNPCS AHSDYMTVKTELTAAFMRAARALEARLKYNVAEAFEWWRLLYNGKFPSYYR
Sequences:
>Translated_291_residues MYLMTRTVNKGFHEFLHRIAPPRTEAESLKTLHSSVADFLRIGYGLNDFIITGSLRNGTCINGWSGYDYFAVMPTGKLKA DSVATVSEIKNYLDFHLQDAEVRIQYPGIEVAVGAQGTTKVIPVDFVTEANGQKIYDMPDDTGGWMRTSPDAHGAYIKTI EQRLGVGGRNLMRLMKAWKYCGGVPISSFYLELAVAKYLEHASSVVYDVDVHGVFQYLFNNEMAPIEDPMGVSGCVNPCS AHSDYMTVKTELTAAFMRAARALEARLKYNVAEAFEWWRLLYNGKFPSYYR >Mature_291_residues MYLMTRTVNKGFHEFLHRIAPPRTEAESLKTLHSSVADFLRIGYGLNDFIITGSLRNGTCINGWSGYDYFAVMPTGKLKA DSVATVSEIKNYLDFHLQDAEVRIQYPGIEVAVGAQGTTKVIPVDFVTEANGQKIYDMPDDTGGWMRTSPDAHGAYIKTI EQRLGVGGRNLMRLMKAWKYCGGVPISSFYLELAVAKYLEHASSVVYDVDVHGVFQYLFNNEMAPIEDPMGVSGCVNPCS AHSDYMTVKTELTAAFMRAARALEARLKYNVAEAFEWWRLLYNGKFPSYYR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32669; Mature: 32669
Theoretical pI: Translated: 6.95; Mature: 6.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYLMTRTVNKGFHEFLHRIAPPRTEAESLKTLHSSVADFLRIGYGLNDFIITGSLRNGTC CEEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCE INGWSGYDYFAVMPTGKLKADSVATVSEIKNYLDFHLQDAEVRIQYPGIEVAVGAQGTTK ECCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCEEECCEEEEECCCEEEEECCCCCCE VIPVDFVTEANGQKIYDMPDDTGGWMRTSPDAHGAYIKTIEQRLGVGGRNLMRLMKAWKY EEEEEEEECCCCCEEEECCCCCCCCEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH CGGVPISSFYLELAVAKYLEHASSVVYDVDVHGVFQYLFNNEMAPIEDPMGVSGCVNPCS HCCCCHHHHHHHHHHHHHHHHHHHEEEECHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC AHSDYMTVKTELTAAFMRAARALEARLKYNVAEAFEWWRLLYNGKFPSYYR CCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MYLMTRTVNKGFHEFLHRIAPPRTEAESLKTLHSSVADFLRIGYGLNDFIITGSLRNGTC CEEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCE INGWSGYDYFAVMPTGKLKADSVATVSEIKNYLDFHLQDAEVRIQYPGIEVAVGAQGTTK ECCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCEEECCEEEEECCCEEEEECCCCCCE VIPVDFVTEANGQKIYDMPDDTGGWMRTSPDAHGAYIKTIEQRLGVGGRNLMRLMKAWKY EEEEEEEECCCCCEEEECCCCCCCCEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH CGGVPISSFYLELAVAKYLEHASSVVYDVDVHGVFQYLFNNEMAPIEDPMGVSGCVNPCS HCCCCHHHHHHHHHHHHHHHHHHHEEEECHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC AHSDYMTVKTELTAAFMRAARALEARLKYNVAEAFEWWRLLYNGKFPSYYR CCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA