| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78221677
Identifier: 78221677
GI number: 78221677
Start: 503535
End: 505553
Strand: Reverse
Name: 78221677
Synonym: Gmet_0456
Alternate gene names: NA
Gene position: 505553-503535 (Counterclockwise)
Preceding gene: 78221678
Following gene: 78221676
Centisome position: 12.65
GC content: 47.89
Gene sequence:
>2019_bases ATGAAAATTGCAATTTTCAGGACATCCGGGGTTATTGCCCCTTTCGTCATAGATGGATACATCACCGGATTTCGCGAAGC AGGCCATGAAGTTTGGGGAATCGACCTGACTACGGAAGGACTCGACTTTACCAAACTACGCTCTTTTCAGCCTGATTTCG TTCTTGCCTATGGTTACAATGGGTTCTGCAAATCCCCCAACGGTTATGCCCTCCGCGAATTGGGAATCCCGCTGGTCTCG CTCCATTACGATTGTCCCTATCTAGCGAGAAACGATGGACTCTCCGACGAGATCAACAATTTCCCGGAATATTATTATGA ATTCGTCTGGGATGATAGTTTTCTGGAGTTGCTTCGGAATGACGGGACGGAGAACTGCGACCATATTCTTTTGGCAACTG ATCCTACCTGGTTTCACCCAATCGCACTCGACTCTCCCTGCATAGAATCTTCAGTCTGTTTTGTCGGTGGAGTATCGGCT CACGTTGAACAGAACTGTGTAGGGATAGAACTCGTAGACAAATTCATTGACGAGGTAATCTATTCCAAGCTCCATAACAT GGAAGTTCCCACATTTGAAATCTGCAAACAGTTTTTTTCAACCCCGGAGTATCGCGCTGTCCATCAGGTGTACACGACTG AACCCGCCAGTTTCTGGCAGATGATCTATTACAAGATTCACGGCAAGGGCAGCACTGTCATGAGGAAATATATCCTCGAC AGCATTGAAGGCGTGGATCTGCACATTTATGGCGGAGGGAATGGTTGGGACAAACCGAACGCCATTTTCCATGAAAAAGT TCCCTACGGCACTGAACTGTCAAAGGCATTCCAGCAATACGCATTGAATCTTAACATCTCTTCCCTGCAGCTTGAAAAAG CCATCAACAATCGACCGTTTGACGCTTACGCATCCAAGGCATTCATGCTGAACGATTACCGGGACGACATGATTCGGGCT TTTCCTGCGCACTGGGAAGAGATCACCTTCAGAAATCTCGACGAATTTGCGGAGAAAGGTGAGTATTTCCTTACGCATGC GCAGGAGCGGCGAGAACTGGTTGCCGACCTGTACGATCATACCCTCCGCCACCATACCTATCGGCACCGGGCCGACCAGA TAGTGGAAAAACTTGCAGCGATCAACTTTTTGAACCGCCCGCAACAACCAAAAACTCAAACGTCGCGCAGCATACTGGCA ATAGATGAAGATAACTATGCCGATTACTGCAAAGACTTGAACACATGCCCTGTTTGTGGAGGCACGGAATTCAATTTAAA GTTTTCGTTCCTGGGCCATGAAGATTACAAATCTACCTTTGATCAATGCATGGATTGCCAGGCGGTCTTTCTCAATCCTT GCCCCACAGATGAATACCTGACCAAATTTTACAATGAGATTTACTATTCCCCCCAACACAGACAGAAAATGGGATGGGAT CCGAATCTGGACACGCCAAATCCAAACTCGTTTTTTCTCCATCAGCGACGGATGGATTTTGTCGAAAAGTATGTTCCAGA AGAGTTGAAATTCCCCCGAGGCAAATTACTGGACATTGGCTGCTCCACCGGGGCGTTCCTCTGGGAAGCCAGCCTCAGGT ATTGGGATGTATGCGGCATCGAGATTTCAGACAAAGCCGCAGAAGTTGCGCGAGAAAAGTATGGTTTGGCGGTAACCACG GGAACACTGCTCGAATCCAGCTTTGACGACGAAACTTTTGATGTTGTCACCGCGTGGGATGTCCTCGAACATATTGCAAA TCCTGCACCTTTTCTAACCATTCTCCGCAGAATTCTCAAGCAAGGGGGGCTCATCCTGCTCAATACGCCCAACATAAATT CGGCCGATGCCGCATATGCCGGCGAGCAATGGCGTCATCTCGACGCCCCCCTCCATCCCGTGCTCTATGATTTCATCTCG ATAAGAATTCTATTGAAAAAGTATGGATTCCAGTGTCTTGAAGTGAGTTCTGGCGACGAATATCACGGACAGATGAAAAT TGCTGCACGGAAAGCATGA
Upstream 100 bases:
>100_bases CAGGACCGGGTCATAACAGCACTCCAGGAGCTTCTATGCCCCCCTTCGGCGCCGAAATAACCGGATGGGCAAGAACAAAT ACGAGGAGGTCGACTAACGC
Downstream 100 bases:
>100_bases ACAGGTCAAACATTATTGACCTCCAGAAGACTCTCAAGACTCTCAACCCTGCTGGCAGCCCCTTGATCTTCGCAAAGGGC ATTGCCTCGAGACGGGAAGC
Product: 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1 4-benzoquinol methylase-like
Products: NA
Alternate protein names: SAM-Dependent Methyltransferase; Methylase/Methyltransferase; CgeB Family Protein; Methyltransferase; Methyltransferase Domain Family; 3-Demethylubiquinone-9 3-O-Methyltransferase; S-Adenosyl-L-Methionine-Dependent Methyltransferase; Ubiquinone/Menaquinone Biosynthesis Methylase-Like Protein; CgeB Protein; Protein Containing Methyltransferase Domain; SAM-Dependent Methyltransferase Family Protein; Spore Maturation Protein; Glycosyl Transferase Family Protein; Methyltransferase/Methylase; Methyltransferase Domain Protein; 3-Demethylubiquinone-9 3-Methyltransferase
Number of amino acids: Translated: 672; Mature: 672
Protein sequence:
>672_residues MKIAIFRTSGVIAPFVIDGYITGFREAGHEVWGIDLTTEGLDFTKLRSFQPDFVLAYGYNGFCKSPNGYALRELGIPLVS LHYDCPYLARNDGLSDEINNFPEYYYEFVWDDSFLELLRNDGTENCDHILLATDPTWFHPIALDSPCIESSVCFVGGVSA HVEQNCVGIELVDKFIDEVIYSKLHNMEVPTFEICKQFFSTPEYRAVHQVYTTEPASFWQMIYYKIHGKGSTVMRKYILD SIEGVDLHIYGGGNGWDKPNAIFHEKVPYGTELSKAFQQYALNLNISSLQLEKAINNRPFDAYASKAFMLNDYRDDMIRA FPAHWEEITFRNLDEFAEKGEYFLTHAQERRELVADLYDHTLRHHTYRHRADQIVEKLAAINFLNRPQQPKTQTSRSILA IDEDNYADYCKDLNTCPVCGGTEFNLKFSFLGHEDYKSTFDQCMDCQAVFLNPCPTDEYLTKFYNEIYYSPQHRQKMGWD PNLDTPNPNSFFLHQRRMDFVEKYVPEELKFPRGKLLDIGCSTGAFLWEASLRYWDVCGIEISDKAAEVAREKYGLAVTT GTLLESSFDDETFDVVTAWDVLEHIANPAPFLTILRRILKQGGLILLNTPNINSADAAYAGEQWRHLDAPLHPVLYDFIS IRILLKKYGFQCLEVSSGDEYHGQMKIAARKA
Sequences:
>Translated_672_residues MKIAIFRTSGVIAPFVIDGYITGFREAGHEVWGIDLTTEGLDFTKLRSFQPDFVLAYGYNGFCKSPNGYALRELGIPLVS LHYDCPYLARNDGLSDEINNFPEYYYEFVWDDSFLELLRNDGTENCDHILLATDPTWFHPIALDSPCIESSVCFVGGVSA HVEQNCVGIELVDKFIDEVIYSKLHNMEVPTFEICKQFFSTPEYRAVHQVYTTEPASFWQMIYYKIHGKGSTVMRKYILD SIEGVDLHIYGGGNGWDKPNAIFHEKVPYGTELSKAFQQYALNLNISSLQLEKAINNRPFDAYASKAFMLNDYRDDMIRA FPAHWEEITFRNLDEFAEKGEYFLTHAQERRELVADLYDHTLRHHTYRHRADQIVEKLAAINFLNRPQQPKTQTSRSILA IDEDNYADYCKDLNTCPVCGGTEFNLKFSFLGHEDYKSTFDQCMDCQAVFLNPCPTDEYLTKFYNEIYYSPQHRQKMGWD PNLDTPNPNSFFLHQRRMDFVEKYVPEELKFPRGKLLDIGCSTGAFLWEASLRYWDVCGIEISDKAAEVAREKYGLAVTT GTLLESSFDDETFDVVTAWDVLEHIANPAPFLTILRRILKQGGLILLNTPNINSADAAYAGEQWRHLDAPLHPVLYDFIS IRILLKKYGFQCLEVSSGDEYHGQMKIAARKA >Mature_672_residues MKIAIFRTSGVIAPFVIDGYITGFREAGHEVWGIDLTTEGLDFTKLRSFQPDFVLAYGYNGFCKSPNGYALRELGIPLVS LHYDCPYLARNDGLSDEINNFPEYYYEFVWDDSFLELLRNDGTENCDHILLATDPTWFHPIALDSPCIESSVCFVGGVSA HVEQNCVGIELVDKFIDEVIYSKLHNMEVPTFEICKQFFSTPEYRAVHQVYTTEPASFWQMIYYKIHGKGSTVMRKYILD SIEGVDLHIYGGGNGWDKPNAIFHEKVPYGTELSKAFQQYALNLNISSLQLEKAINNRPFDAYASKAFMLNDYRDDMIRA FPAHWEEITFRNLDEFAEKGEYFLTHAQERRELVADLYDHTLRHHTYRHRADQIVEKLAAINFLNRPQQPKTQTSRSILA IDEDNYADYCKDLNTCPVCGGTEFNLKFSFLGHEDYKSTFDQCMDCQAVFLNPCPTDEYLTKFYNEIYYSPQHRQKMGWD PNLDTPNPNSFFLHQRRMDFVEKYVPEELKFPRGKLLDIGCSTGAFLWEASLRYWDVCGIEISDKAAEVAREKYGLAVTT GTLLESSFDDETFDVVTAWDVLEHIANPAPFLTILRRILKQGGLILLNTPNINSADAAYAGEQWRHLDAPLHPVLYDFIS IRILLKKYGFQCLEVSSGDEYHGQMKIAARKA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 77236; Mature: 77236
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIAIFRTSGVIAPFVIDGYITGFREAGHEVWGIDLTTEGLDFTKLRSFQPDFVLAYGYN CEEEEEECCCCEEHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHCCCCCEEEEECCC GFCKSPNGYALRELGIPLVSLHYDCPYLARNDGLSDEINNFPEYYYEFVWDDSFLELLRN CCCCCCCCCCHHHHCCCEEEEECCCCCCCCCCCCCHHHHCCHHHHHHHHCCHHHHHHHHC DGTENCDHILLATDPTWFHPIALDSPCIESSVCFVGGVSAHVEQNCVGIELVDKFIDEVI CCCCCCCEEEEECCCCEECCCCCCCCCCCCCCCEECCCHHHHHCCCCHHHHHHHHHHHHH YSKLHNMEVPTFEICKQFFSTPEYRAVHQVYTTEPASFWQMIYYKIHGKGSTVMRKYILD HHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHCCCHHHHHEEEEEEEECCCHHHHHHHHHH SIEGVDLHIYGGGNGWDKPNAIFHEKVPYGTELSKAFQQYALNLNISSLQLEKAINNRPF CCCCCEEEEEECCCCCCCCCCEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCC DAYASKAFMLNDYRDDMIRAFPAHWEEITFRNLDEFAEKGEYFLTHAQERRELVADLYDH HHHHCCEEEECCHHHHHHHHCCCHHHHHHHCCHHHHHHCCCEEEHHHHHHHHHHHHHHHH TLRHHTYRHRADQIVEKLAAINFLNRPQQPKTQTSRSILAIDEDNYADYCKDLNTCPVCG HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCHHHHHCCCCCCCCCC GTEFNLKFSFLGHEDYKSTFDQCMDCQAVFLNPCPTDEYLTKFYNEIYYSPQHRQKMGWD CCEEEEEEEEECCHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHCCCCHHHHCCCC PNLDTPNPNSFFLHQRRMDFVEKYVPEELKFPRGKLLDIGCSTGAFLWEASLRYWDVCGI CCCCCCCCCCEEHHHHHHHHHHHHCCHHHCCCCCCEEEECCCCCCHHHHCCCCEEEEECE EISDKAAEVAREKYGLAVTTGTLLESSFDDETFDVVTAWDVLEHIANPAPFLTILRRILK EECHHHHHHHHHHCCEEEEEHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH QGGLILLNTPNINSADAAYAGEQWRHLDAPLHPVLYDFISIRILLKKYGFQCLEVSSGDE HCCEEEEECCCCCCCCHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCC YHGQMKIAARKA CCCEEEEEEECC >Mature Secondary Structure MKIAIFRTSGVIAPFVIDGYITGFREAGHEVWGIDLTTEGLDFTKLRSFQPDFVLAYGYN CEEEEEECCCCEEHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHCCCCCEEEEECCC GFCKSPNGYALRELGIPLVSLHYDCPYLARNDGLSDEINNFPEYYYEFVWDDSFLELLRN CCCCCCCCCCHHHHCCCEEEEECCCCCCCCCCCCCHHHHCCHHHHHHHHCCHHHHHHHHC DGTENCDHILLATDPTWFHPIALDSPCIESSVCFVGGVSAHVEQNCVGIELVDKFIDEVI CCCCCCCEEEEECCCCEECCCCCCCCCCCCCCCEECCCHHHHHCCCCHHHHHHHHHHHHH YSKLHNMEVPTFEICKQFFSTPEYRAVHQVYTTEPASFWQMIYYKIHGKGSTVMRKYILD HHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHCCCHHHHHEEEEEEEECCCHHHHHHHHHH SIEGVDLHIYGGGNGWDKPNAIFHEKVPYGTELSKAFQQYALNLNISSLQLEKAINNRPF CCCCCEEEEEECCCCCCCCCCEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCC DAYASKAFMLNDYRDDMIRAFPAHWEEITFRNLDEFAEKGEYFLTHAQERRELVADLYDH HHHHCCEEEECCHHHHHHHHCCCHHHHHHHCCHHHHHHCCCEEEHHHHHHHHHHHHHHHH TLRHHTYRHRADQIVEKLAAINFLNRPQQPKTQTSRSILAIDEDNYADYCKDLNTCPVCG HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCHHHHHCCCCCCCCCC GTEFNLKFSFLGHEDYKSTFDQCMDCQAVFLNPCPTDEYLTKFYNEIYYSPQHRQKMGWD CCEEEEEEEEECCHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHCCCCHHHHCCCC PNLDTPNPNSFFLHQRRMDFVEKYVPEELKFPRGKLLDIGCSTGAFLWEASLRYWDVCGI CCCCCCCCCCEEHHHHHHHHHHHHCCHHHCCCCCCEEEECCCCCCHHHHCCCCEEEEECE EISDKAAEVAREKYGLAVTTGTLLESSFDDETFDVVTAWDVLEHIANPAPFLTILRRILK EECHHHHHHHHHHCCEEEEEHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH QGGLILLNTPNINSADAAYAGEQWRHLDAPLHPVLYDFISIRILLKKYGFQCLEVSSGDE HCCEEEEECCCCCCCCHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCC YHGQMKIAARKA CCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA