Definition Geobacter metallireducens GS-15 chromosome, complete genome.
Accession NC_007517
Length 3,997,420

Click here to switch to the map view.

The map label for this gene is 78221399

Identifier: 78221399

GI number: 78221399

Start: 203391

End: 204290

Strand: Direct

Name: 78221399

Synonym: Gmet_0175

Alternate gene names: NA

Gene position: 203391-204290 (Clockwise)

Preceding gene: 78221398

Following gene: 78221402

Centisome position: 5.09

GC content: 65.67

Gene sequence:

>900_bases
ATGTCTCGCTGGTTGAAGGCCGCAGCCGCGGCCTTTCTCATGCTGCTGAGTACGACCGTGGCCCGGGCAGGCGATGCGCA
GCACTACGCAGTGGCAGAGTTGCCGACGCCGGTGCTCAACACCCCGGATTTTCCCCGCGTATTCGGCGGCCAGGACGGCA
GGACCGTCAAAACCGACCACCAGGGACAGATCCGAGAACTAGAGTTCATCGCCCTGCCGGGGGCAGCCTTTACGGTGCAG
GAGACGCTCCGCAGGGGGGGATCGGTGGTCCACCGGGTCACCACCGACGACTACCCCTACCCGACCACGACAGGCTACTT
TGTGGATGCCCGCTTCGTACGGCTCACGGACGAAACGCCCCATCCCCGTGCCCGGAAACTTCCTTCCCGCAACAAGATCA
TCACCCGACTCCTGGCGGCCCGGGGAAGCCGTTACGTCTGGGGAGGAAACGTCCGTGCGGGGGTGCCGGATATGATCCGC
CTCTTTCCCCCGGCGGGAAAACTCTCCGCCGAGACGGAGCGCCGCTGGCTGCTGCAAGGGCTCGACTGCTCGGGGCTCCT
CTACGAGGCCACCGACGGCGTCACCCCCCGCAACACGAGCGCCCTTGCTGGCTACGGCCGGGGGGTGCCCATTGCCGGGC
TCTCTACAGAAGAGATCCGCCAGCAACTGGAGCCCCTGGACCTCATCGTCTGGAAGGGACACGTGATTATCGTCCTTGAC
CGGGAGCGGACCATCGAGAGCCGACTCGGCCCGGTGCCGGGAAAGCGGGACGGTGTGGCCGTGAGGCCGCTGCGGGATGT
TCTGTCCGAGGTGATGGGAAAGAGGGTGCCTGTGGATCGGTTCGCGGAGAAAAACGGGAGGGGAGAGAAGACCTTTGTCG
TGCGACGGTGGTACCCCTAG

Upstream 100 bases:

>100_bases
ACCAACGGGTACGCGTCGCTTCCTCGTTCGCTTGCGCCTAGCATCCCGGCCTCCTCATCACGTTTTGCAAATGCCTCACG
TAGCAACGAAAGGAATTGTC

Downstream 100 bases:

>100_bases
AATCCCCTGCGCCGGAGTTCCTCGCCGATAAGCCGCTTTTGCTCCTGGCCGAGGCGGCCCGAGACTGCCAGGTTCCGAAG
TTCCATGGCCGGTGCCCCGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 299; Mature: 298

Protein sequence:

>299_residues
MSRWLKAAAAAFLMLLSTTVARAGDAQHYAVAELPTPVLNTPDFPRVFGGQDGRTVKTDHQGQIRELEFIALPGAAFTVQ
ETLRRGGSVVHRVTTDDYPYPTTTGYFVDARFVRLTDETPHPRARKLPSRNKIITRLLAARGSRYVWGGNVRAGVPDMIR
LFPPAGKLSAETERRWLLQGLDCSGLLYEATDGVTPRNTSALAGYGRGVPIAGLSTEEIRQQLEPLDLIVWKGHVIIVLD
RERTIESRLGPVPGKRDGVAVRPLRDVLSEVMGKRVPVDRFAEKNGRGEKTFVVRRWYP

Sequences:

>Translated_299_residues
MSRWLKAAAAAFLMLLSTTVARAGDAQHYAVAELPTPVLNTPDFPRVFGGQDGRTVKTDHQGQIRELEFIALPGAAFTVQ
ETLRRGGSVVHRVTTDDYPYPTTTGYFVDARFVRLTDETPHPRARKLPSRNKIITRLLAARGSRYVWGGNVRAGVPDMIR
LFPPAGKLSAETERRWLLQGLDCSGLLYEATDGVTPRNTSALAGYGRGVPIAGLSTEEIRQQLEPLDLIVWKGHVIIVLD
RERTIESRLGPVPGKRDGVAVRPLRDVLSEVMGKRVPVDRFAEKNGRGEKTFVVRRWYP
>Mature_298_residues
SRWLKAAAAAFLMLLSTTVARAGDAQHYAVAELPTPVLNTPDFPRVFGGQDGRTVKTDHQGQIRELEFIALPGAAFTVQE
TLRRGGSVVHRVTTDDYPYPTTTGYFVDARFVRLTDETPHPRARKLPSRNKIITRLLAARGSRYVWGGNVRAGVPDMIRL
FPPAGKLSAETERRWLLQGLDCSGLLYEATDGVTPRNTSALAGYGRGVPIAGLSTEEIRQQLEPLDLIVWKGHVIIVLDR
ERTIESRLGPVPGKRDGVAVRPLRDVLSEVMGKRVPVDRFAEKNGRGEKTFVVRRWYP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33206; Mature: 33074

Theoretical pI: Translated: 10.56; Mature: 10.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRWLKAAAAAFLMLLSTTVARAGDAQHYAVAELPTPVLNTPDFPRVFGGQDGRTVKTDH
CCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCHHCCCCCCCEEECCC
QGQIRELEFIALPGAAFTVQETLRRGGSVVHRVTTDDYPYPTTTGYFVDARFVRLTDETP
CCCEEEEEEEEECCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEEEEEEEEEEECCCC
HPRARKLPSRNKIITRLLAARGSRYVWGGNVRAGVPDMIRLFPPAGKLSAETERRWLLQG
CCHHHCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHC
LDCSGLLYEATDGVTPRNTSALAGYGRGVPIAGLSTEEIRQQLEPLDLIVWKGHVIIVLD
CCCCCEEEECCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHCCCCEEEEECCEEEEEEC
RERTIESRLGPVPGKRDGVAVRPLRDVLSEVMGKRVPVDRFAEKNGRGEKTFVVRRWYP
CCHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHCCCCCHHHHHHCCCCCCEEEEEEECCC
>Mature Secondary Structure 
SRWLKAAAAAFLMLLSTTVARAGDAQHYAVAELPTPVLNTPDFPRVFGGQDGRTVKTDH
CHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCHHCCCCCCCEEECCC
QGQIRELEFIALPGAAFTVQETLRRGGSVVHRVTTDDYPYPTTTGYFVDARFVRLTDETP
CCCEEEEEEEEECCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEEEEEEEEEEECCCC
HPRARKLPSRNKIITRLLAARGSRYVWGGNVRAGVPDMIRLFPPAGKLSAETERRWLLQG
CCHHHCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHC
LDCSGLLYEATDGVTPRNTSALAGYGRGVPIAGLSTEEIRQQLEPLDLIVWKGHVIIVLD
CCCCCEEEECCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHCCCCEEEEECCEEEEEEC
RERTIESRLGPVPGKRDGVAVRPLRDVLSEVMGKRVPVDRFAEKNGRGEKTFVVRRWYP
CCHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHCCCCCHHHHHHCCCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA