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The map label for this gene is 78221351

Identifier: 78221351

GI number: 78221351

Start: 150580

End: 151875

Strand: Direct

Name: 78221351

Synonym: Gmet_0124

Alternate gene names: NA

Gene position: 150580-151875 (Clockwise)

Preceding gene: 78221350

Following gene: 78221352

Centisome position: 3.77

GC content: 68.13

Gene sequence:

>1296_bases
ATGCCCGAACTCAGCCTTGCCGAAAAACTCGAAATCCTCGCCGACGGCGCCAAGTACGATGTCTCCTGCGCCTCCAGCGG
CAGCTCGCGCCGTAACAAAGGGGGGATCGGCAACGCCGCCCAGTGCGGCATCTGCCACAGCTGGACCGCCGACGGCCGCT
GCGTGTCGCTCCTCAAAATCCTCCTGACCAACGCCTGCATTTACGACTGCGCCTACTGCGTGAACCGCCGCTCCAACGAT
ACCCGCCGGGTGCTCCTCACCCCCGCCGAGGTGGCGGAACTCACCATCGGCTTCTACCGCCGCAACGCCATCGAGGGGCT
CTTCCTCTCCACCGGCGTGGTGAAGGATCCGGACCACACCATGGAGCTCCTCATCGAGGCGACCAGCATCCTGCGGGAGG
AGCACCGCTTCAACGGCTACATCCACGTGAAGGTGGTCCCCGGCGCCGACCTTCTCCTGGTTGACCGGCTGGGGCGCCTG
GCGGACCGGGTGAGCGTCAACATGGAGCTGCCGAGCAGGGAGAGCCTGCAACTCCTGGCCCCGGACAAAAGCCGCGAGGC
CATCGTCGCACCCATGAAACGGGTGGGGGAGCTCATCGTCCAGACAAAGGAGGAGCGGAAGGTATCCCGGAAGATCCCTC
CCTTTGCCCCGGCGGGGCAGAGCACCCAGCTCATCATCGGCGCCAGCGGGGAGAGCGACCTGCAGATCGTGTCGCTGGCC
GCCGGGCTCTACGGGCGCCTCTCCATGAAGCGGGTCTACTACTCGGCCTTCATTCCGGTGAACACCGACACTCGCCTCCC
CTCCGTGGTCGGCACGCCGCCCCTGGTGCGGGAGCACCGCCTCTACCAGGCCGACTGGCTCATGCGCTACTACGGGTTCG
CCGCCGGGGAGCTTCTGGACGAGGAGCACCCCAACCTGGACCTCTCCCTGGACCCCAAGGCGGGGTGGGCCCTGCGGAAC
CTCCACCTCTTCCCCGTGGAGGTGAACCGAGCCCCCCTGGAACTTCTCCTGCGGGTGCCGGGGATCGGCGTCCGGTCGGC
CCAGCGGATCGTCGGGGCACGGCGGGGGGGACACCTCTCCCTGGATGATCTGGCCCTGCTTGGGGTGGTCATGAAGCGGG
CCCGGTACTTCGTCACGGCCCGGGGACGGTTCGGTGCCGACATGACCCCGGACGCCGCGGGACTCCAGGCGCGGCTCACG
GAGCGGACTACCCCCCGGCCTCGCTGGAGCCAGCCCTCCCTCTTCGACGGCGCCAACGCCATCGACATCCGGTCCACCAT
CACGGGGGAGCTGTGA

Upstream 100 bases:

>100_bases
CGTTTTCCCTCTGAGGCGATACATTAGCGACACATTCCGTCACAGGCCCGGGGTAGGATTGCCCGGGCCTTGATTATTCT
GACGGGAAACAGTGAGCACC

Downstream 100 bases:

>100_bases
TCCTCCGCTACGACGGCACCTTTGCCGGATTTCTCACGGCCGTGGCCCTGGCACGGGAGCGGAGCGCCGAGCCCGAGGCG
ATCACTGACCGGGAGCCGGA

Product: radical SAM family protein

Products: NA

Alternate protein names: Radical SAM Domain Protein; Radical SAM Family Protein; Elongator /MiaB/NifB; Radical Sam Domain Protein; Radical SAM; Radical SAM Superfamily Protein; Biotin Synthase Related Domain-Containing Protein; Biotin Synthase Related Domain Containing Protein; Elongator Protein; Radical SAM Methylase Protein; Helix-Hairpin-Helix Motif; Radical SAM Protein

Number of amino acids: Translated: 431; Mature: 430

Protein sequence:

>431_residues
MPELSLAEKLEILADGAKYDVSCASSGSSRRNKGGIGNAAQCGICHSWTADGRCVSLLKILLTNACIYDCAYCVNRRSND
TRRVLLTPAEVAELTIGFYRRNAIEGLFLSTGVVKDPDHTMELLIEATSILREEHRFNGYIHVKVVPGADLLLVDRLGRL
ADRVSVNMELPSRESLQLLAPDKSREAIVAPMKRVGELIVQTKEERKVSRKIPPFAPAGQSTQLIIGASGESDLQIVSLA
AGLYGRLSMKRVYYSAFIPVNTDTRLPSVVGTPPLVREHRLYQADWLMRYYGFAAGELLDEEHPNLDLSLDPKAGWALRN
LHLFPVEVNRAPLELLLRVPGIGVRSAQRIVGARRGGHLSLDDLALLGVVMKRARYFVTARGRFGADMTPDAAGLQARLT
ERTTPRPRWSQPSLFDGANAIDIRSTITGEL

Sequences:

>Translated_431_residues
MPELSLAEKLEILADGAKYDVSCASSGSSRRNKGGIGNAAQCGICHSWTADGRCVSLLKILLTNACIYDCAYCVNRRSND
TRRVLLTPAEVAELTIGFYRRNAIEGLFLSTGVVKDPDHTMELLIEATSILREEHRFNGYIHVKVVPGADLLLVDRLGRL
ADRVSVNMELPSRESLQLLAPDKSREAIVAPMKRVGELIVQTKEERKVSRKIPPFAPAGQSTQLIIGASGESDLQIVSLA
AGLYGRLSMKRVYYSAFIPVNTDTRLPSVVGTPPLVREHRLYQADWLMRYYGFAAGELLDEEHPNLDLSLDPKAGWALRN
LHLFPVEVNRAPLELLLRVPGIGVRSAQRIVGARRGGHLSLDDLALLGVVMKRARYFVTARGRFGADMTPDAAGLQARLT
ERTTPRPRWSQPSLFDGANAIDIRSTITGEL
>Mature_430_residues
PELSLAEKLEILADGAKYDVSCASSGSSRRNKGGIGNAAQCGICHSWTADGRCVSLLKILLTNACIYDCAYCVNRRSNDT
RRVLLTPAEVAELTIGFYRRNAIEGLFLSTGVVKDPDHTMELLIEATSILREEHRFNGYIHVKVVPGADLLLVDRLGRLA
DRVSVNMELPSRESLQLLAPDKSREAIVAPMKRVGELIVQTKEERKVSRKIPPFAPAGQSTQLIIGASGESDLQIVSLAA
GLYGRLSMKRVYYSAFIPVNTDTRLPSVVGTPPLVREHRLYQADWLMRYYGFAAGELLDEEHPNLDLSLDPKAGWALRNL
HLFPVEVNRAPLELLLRVPGIGVRSAQRIVGARRGGHLSLDDLALLGVVMKRARYFVTARGRFGADMTPDAAGLQARLTE
RTTPRPRWSQPSLFDGANAIDIRSTITGEL

Specific function: Unknown

COG id: COG4277

COG function: function code R; Predicted DNA-binding protein with the Helix-hairpin-helix motif

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47434; Mature: 47303

Theoretical pI: Translated: 8.98; Mature: 8.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPELSLAEKLEILADGAKYDVSCASSGSSRRNKGGIGNAAQCGICHSWTADGRCVSLLKI
CCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHH
LLTNACIYDCAYCVNRRSNDTRRVLLTPAEVAELTIGFYRRNAIEGLFLSTGVVKDPDHT
HHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHHCEEEEECCCCCCCHHH
MELLIEATSILREEHRFNGYIHVKVVPGADLLLVDRLGRLADRVSVNMELPSRESLQLLA
HHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHEEEEEECCCCCCEEEEC
PDKSREAIVAPMKRVGELIVQTKEERKVSRKIPPFAPAGQSTQLIIGASGESDLQIVSLA
CCCCCHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCEEEEEEH
AGLYGRLSMKRVYYSAFIPVNTDTRLPSVVGTPPLVREHRLYQADWLMRYYGFAAGELLD
HHHHHHHHHEEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHC
EEHPNLDLSLDPKAGWALRNLHLFPVEVNRAPLELLLRVPGIGVRSAQRIVGARRGGHLS
CCCCCCEEEECCCCCCEEECEEEEEEECCCCCHHHHHCCCCCCHHHHHHHHHHCCCCCCC
LDDLALLGVVMKRARYFVTARGRFGADMTPDAAGLQARLTERTTPRPRWSQPSLFDGANA
HHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCE
IDIRSTITGEL
EEEHHHCCCCC
>Mature Secondary Structure 
PELSLAEKLEILADGAKYDVSCASSGSSRRNKGGIGNAAQCGICHSWTADGRCVSLLKI
CCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHH
LLTNACIYDCAYCVNRRSNDTRRVLLTPAEVAELTIGFYRRNAIEGLFLSTGVVKDPDHT
HHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHHCEEEEECCCCCCCHHH
MELLIEATSILREEHRFNGYIHVKVVPGADLLLVDRLGRLADRVSVNMELPSRESLQLLA
HHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHEEEEEECCCCCCEEEEC
PDKSREAIVAPMKRVGELIVQTKEERKVSRKIPPFAPAGQSTQLIIGASGESDLQIVSLA
CCCCCHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCEEEEEEH
AGLYGRLSMKRVYYSAFIPVNTDTRLPSVVGTPPLVREHRLYQADWLMRYYGFAAGELLD
HHHHHHHHHEEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHC
EEHPNLDLSLDPKAGWALRNLHLFPVEVNRAPLELLLRVPGIGVRSAQRIVGARRGGHLS
CCCCCCEEEECCCCCCEEECEEEEEEECCCCCHHHHHCCCCCCHHHHHHHHHHCCCCCCC
LDDLALLGVVMKRARYFVTARGRFGADMTPDAAGLQARLTERTTPRPRWSQPSLFDGANA
HHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCE
IDIRSTITGEL
EEEHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA