| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78221352
Identifier: 78221352
GI number: 78221352
Start: 151872
End: 152618
Strand: Direct
Name: 78221352
Synonym: Gmet_0125
Alternate gene names: NA
Gene position: 151872-152618 (Clockwise)
Preceding gene: 78221351
Following gene: 78221353
Centisome position: 3.8
GC content: 69.34
Gene sequence:
>747_bases GTGATCCTCCGCTACGACGGCACCTTTGCCGGATTTCTCACGGCCGTGGCCCTGGCACGGGAGCGGAGCGCCGAGCCCGA GGCGATCACTGACCGGGAGCCGGAGCAACAGGGGCTCTTCGCCGCCGTCGAAGAAGTGGAGACGGACCGGGACCGGGCCG GGGAGCTCTATCAGCTCATCCGCCGTACCCTCCCCGCCGGGGCCGTGCAGACTCTCCGCTACGCCTTCCACGCCGGGGAA CCGGGTCGGGAAATCCTCCTCTTCCGCTACCTGCAACTGGGGCTGACAACGGGGCCCCGGTTCGGCGCCATGCTGGCCCA CGAGGCGGTCATCCCGGTCTGGAAGCTGGCCCGGGCAGTGGGGCGCGAGGCCCACCGCTACAAGGGGCTTGTTCGCTTCC GGCAACTGGAGGGGGATGTCTGGTACGCCGCCATGGAGCCCGATCACCGGATCCTCCCCCTCATCGCTCCCCACTTCGCG GCCCGGTTCGCCGACCAGCGCTGGATCATCCACGACCGACGGCGGAACGAGGCGGTGGCCTTCGACCCTGCCCGCCGCGA GTGGGCCGACATTCCCCTGGAGGTGACCGGTCCCCTCCCCCTCTCCGCTGGAGAGGAGCTCTTTCGGGATCTCTGGCAGC GCTACTTCGACCGCCTCTCCATCGCGGAGCGCCACAATCCGAAGCTCCAGCGGCAAAACCTCCCCCTGAAGCACCGCCGG CACCTACCGGAGTTCGAGCGGGAGTGA
Upstream 100 bases:
>100_bases GGCTCACGGAGCGGACTACCCCCCGGCCTCGCTGGAGCCAGCCCTCCCTCTTCGACGGCGCCAACGCCATCGACATCCGG TCCACCATCACGGGGGAGCT
Downstream 100 bases:
>100_bases ACTGAACGCTACCGTCTGGATTTTTCCCGCAATGCTGGTATTCTGTCGAAGTCGCGAACACGAAGTGAAGGAGACAATGC GTGAAACCAACAAAAGAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 248; Mature: 248
Protein sequence:
>248_residues MILRYDGTFAGFLTAVALARERSAEPEAITDREPEQQGLFAAVEEVETDRDRAGELYQLIRRTLPAGAVQTLRYAFHAGE PGREILLFRYLQLGLTTGPRFGAMLAHEAVIPVWKLARAVGREAHRYKGLVRFRQLEGDVWYAAMEPDHRILPLIAPHFA ARFADQRWIIHDRRRNEAVAFDPARREWADIPLEVTGPLPLSAGEELFRDLWQRYFDRLSIAERHNPKLQRQNLPLKHRR HLPEFERE
Sequences:
>Translated_248_residues MILRYDGTFAGFLTAVALARERSAEPEAITDREPEQQGLFAAVEEVETDRDRAGELYQLIRRTLPAGAVQTLRYAFHAGE PGREILLFRYLQLGLTTGPRFGAMLAHEAVIPVWKLARAVGREAHRYKGLVRFRQLEGDVWYAAMEPDHRILPLIAPHFA ARFADQRWIIHDRRRNEAVAFDPARREWADIPLEVTGPLPLSAGEELFRDLWQRYFDRLSIAERHNPKLQRQNLPLKHRR HLPEFERE >Mature_248_residues MILRYDGTFAGFLTAVALARERSAEPEAITDREPEQQGLFAAVEEVETDRDRAGELYQLIRRTLPAGAVQTLRYAFHAGE PGREILLFRYLQLGLTTGPRFGAMLAHEAVIPVWKLARAVGREAHRYKGLVRFRQLEGDVWYAAMEPDHRILPLIAPHFA ARFADQRWIIHDRRRNEAVAFDPARREWADIPLEVTGPLPLSAGEELFRDLWQRYFDRLSIAERHNPKLQRQNLPLKHRR HLPEFERE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28804; Mature: 28804
Theoretical pI: Translated: 8.83; Mature: 8.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILRYDGTFAGFLTAVALARERSAEPEAITDREPEQQGLFAAVEEVETDRDRAGELYQLI CEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHH RRTLPAGAVQTLRYAFHAGEPGREILLFRYLQLGLTTGPRFGAMLAHEAVIPVWKLARAV HHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH GREAHRYKGLVRFRQLEGDVWYAAMEPDHRILPLIAPHFAARFADQRWIIHDRRRNEAVA HHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCEE FDPARREWADIPLEVTGPLPLSAGEELFRDLWQRYFDRLSIAERHNPKLQRQNLPLKHRR ECCHHHHHHCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHH HLPEFERE CCCCCCCC >Mature Secondary Structure MILRYDGTFAGFLTAVALARERSAEPEAITDREPEQQGLFAAVEEVETDRDRAGELYQLI CEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHH RRTLPAGAVQTLRYAFHAGEPGREILLFRYLQLGLTTGPRFGAMLAHEAVIPVWKLARAV HHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH GREAHRYKGLVRFRQLEGDVWYAAMEPDHRILPLIAPHFAARFADQRWIIHDRRRNEAVA HHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCEE FDPARREWADIPLEVTGPLPLSAGEELFRDLWQRYFDRLSIAERHNPKLQRQNLPLKHRR ECCHHHHHHCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHH HLPEFERE CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA