| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is dinD [H]
Identifier: 78221301
GI number: 78221301
Start: 91103
End: 91474
Strand: Reverse
Name: dinD [H]
Synonym: Gmet_0074
Alternate gene names: 78221301
Gene position: 91474-91103 (Counterclockwise)
Preceding gene: 78221302
Following gene: 78221300
Centisome position: 2.29
GC content: 51.88
Gene sequence:
>372_bases ATGAGCAAACGATTATCGAAAGACATTGCCGGTAAACACGTCTCTCCCTTCGAGCAGATCAAACGCACCAATGACGCGGG CAGTGAATTCTGGTCAAGCCGCGATTTTGCCCAGATTCTGGATTATGCTGACTATCGCAACTTCGAGCAGGTAGTCACCA AGGCACGTACCGCCTGCTTCAACAGCGGCCAGCGGATAGATGACCATTTCGTTGACGTCACCGAAATGGTCGATCTCGGC AGTGGCGCGAAACGCCAGGTAAAATCGGTATTTCTATCCCGCTACGCCTGTTATTTGATCGTTCAAAATGCCGACCCCAG CAAAGAAATCGTCGCCCTTGGCCAGACCTATTGCCGGTTGCCGACAGCATAA
Upstream 100 bases:
>100_bases TGCGCGCCGCCCACGCCTTCGAGCAGGCCACGGCGTGGCATACGCAAAAGGCCGGGATATAGGGGCGATCACAAAAGGCG GGAATGGTGAGGGCTCTGAA
Downstream 100 bases:
>100_bases AGAAGTTGGAGAAAAAACAGAAAAAGCTACTATCCGAACTCCCTGAACCAGGAGAAACCGAATGAACTACCAAGCCGTCA TCGGCCTTGAAGTCCACGTC
Product: DNA-damage-inducible protein D
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 123; Mature: 122
Protein sequence:
>123_residues MSKRLSKDIAGKHVSPFEQIKRTNDAGSEFWSSRDFAQILDYADYRNFEQVVTKARTACFNSGQRIDDHFVDVTEMVDLG SGAKRQVKSVFLSRYACYLIVQNADPSKEIVALGQTYCRLPTA
Sequences:
>Translated_123_residues MSKRLSKDIAGKHVSPFEQIKRTNDAGSEFWSSRDFAQILDYADYRNFEQVVTKARTACFNSGQRIDDHFVDVTEMVDLG SGAKRQVKSVFLSRYACYLIVQNADPSKEIVALGQTYCRLPTA >Mature_122_residues SKRLSKDIAGKHVSPFEQIKRTNDAGSEFWSSRDFAQILDYADYRNFEQVVTKARTACFNSGQRIDDHFVDVTEMVDLGS GAKRQVKSVFLSRYACYLIVQNADPSKEIVALGQTYCRLPTA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082303, Length=111, Percent_Identity=52.2522522522522, Blast_Score=135, Evalue=6e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13920; Mature: 13789
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKRLSKDIAGKHVSPFEQIKRTNDAGSEFWSSRDFAQILDYADYRNFEQVVTKARTACF CCCHHHHHHCCCCCCHHHHHHHCCCCHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHH NSGQRIDDHFVDVTEMVDLGSGAKRQVKSVFLSRYACYLIVQNADPSKEIVALGQTYCRL CCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHCC PTA CCC >Mature Secondary Structure SKRLSKDIAGKHVSPFEQIKRTNDAGSEFWSSRDFAQILDYADYRNFEQVVTKARTACF CCHHHHHHCCCCCCHHHHHHHCCCCHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHH NSGQRIDDHFVDVTEMVDLGSGAKRQVKSVFLSRYACYLIVQNADPSKEIVALGQTYCRL CCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHCC PTA CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2664418; 7686882; 9278503; 2158980; 1925027; 8195095; 8057377; 8002613 [H]