Definition Geobacter metallireducens GS-15 chromosome, complete genome.
Accession NC_007517
Length 3,997,420

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The map label for this gene is 78221255

Identifier: 78221255

GI number: 78221255

Start: 33627

End: 34214

Strand: Direct

Name: 78221255

Synonym: Gmet_0027

Alternate gene names: NA

Gene position: 33627-34214 (Clockwise)

Preceding gene: 78221254

Following gene: 78221256

Centisome position: 0.84

GC content: 63.95

Gene sequence:

>588_bases
ATGGTGAGCTTTTGCTGCAGATTGACGCGCGCGCTTGTCTTTACGGCGCTTCTCGCCATCGTCTTCATGGTGCTGGCCGG
CTGCGGGCCAAAAACCCAGATCAGCGTCTCCCCCTCCTTCCGCCCCGCCTCCGATGTGGAAACCGCCTATGTGGTCCCCT
TTGGCGGCGCCCTGGTACCCGAGGAGTTCTCCGCCACGGTCTTCAACGATTTTGTGGACCAGCTCAACGGCCGCCGGCGC
GAGACCGGGATCCGCTCCTTCGCCATCCTCAAGGACGAGGTGAGTGCGGTGGATCCCGGCTGGCTCGCCCGCCAGTACTA
CATCTCCGGCGACATCTGGAGTTATGTGGAGGACTCGGGGTGCTGTTCCACCAATATCCGGGTCAAGGCCCGCGTTTACG
TCCATGAGCCCGGGAGGAGCATCCCGTCGGTGGAGATCTTCGTTCCCATGGAGAGCTTCTTCGACCATGACCGCTCCACC
ATCGACCGGGAGCGGGGCCGCCTTGCCCGGGATCTTGCCCGGGACCTCTCCCAGAAGGTACTTGCCGCCATGGCGCCGCT
ACGTCCCCCCGTGTCTTCTTCCCCCTGA

Upstream 100 bases:

>100_bases
GGAAGAAGCTTGCCTCCTACGCCCAGGCCAAGGTGCCGGGGAGCCGGGAGTACGAGGTCCTCTACCAGAAATTCTACCAG
GAAGAGATGGCGAAGCGGAA

Downstream 100 bases:

>100_bases
AATTTTTTTTGCAAATGACCTTGATTTTTGCCCGGGGGGTGACTATAGTTACTTCGCGTTAGCACTCAGCTGTATCGAGT
GCTAATTTTTTTCGATGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MVSFCCRLTRALVFTALLAIVFMVLAGCGPKTQISVSPSFRPASDVETAYVVPFGGALVPEEFSATVFNDFVDQLNGRRR
ETGIRSFAILKDEVSAVDPGWLARQYYISGDIWSYVEDSGCCSTNIRVKARVYVHEPGRSIPSVEIFVPMESFFDHDRST
IDRERGRLARDLARDLSQKVLAAMAPLRPPVSSSP

Sequences:

>Translated_195_residues
MVSFCCRLTRALVFTALLAIVFMVLAGCGPKTQISVSPSFRPASDVETAYVVPFGGALVPEEFSATVFNDFVDQLNGRRR
ETGIRSFAILKDEVSAVDPGWLARQYYISGDIWSYVEDSGCCSTNIRVKARVYVHEPGRSIPSVEIFVPMESFFDHDRST
IDRERGRLARDLARDLSQKVLAAMAPLRPPVSSSP
>Mature_195_residues
MVSFCCRLTRALVFTALLAIVFMVLAGCGPKTQISVSPSFRPASDVETAYVVPFGGALVPEEFSATVFNDFVDQLNGRRR
ETGIRSFAILKDEVSAVDPGWLARQYYISGDIWSYVEDSGCCSTNIRVKARVYVHEPGRSIPSVEIFVPMESFFDHDRST
IDRERGRLARDLARDLSQKVLAAMAPLRPPVSSSP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21585; Mature: 21585

Theoretical pI: Translated: 7.25; Mature: 7.25

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSFCCRLTRALVFTALLAIVFMVLAGCGPKTQISVSPSFRPASDVETAYVVPFGGALVP
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCEEEEEECCCCCCC
EEFSATVFNDFVDQLNGRRRETGIRSFAILKDEVSAVDPGWLARQYYISGDIWSYVEDSG
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHEEEEECCCHHHHHCCCC
CCSTNIRVKARVYVHEPGRSIPSVEIFVPMESFFDHDRSTIDRERGRLARDLARDLSQKV
CCCCCEEEEEEEEEECCCCCCCCEEEEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
LAAMAPLRPPVSSSP
HHHHHCCCCCCCCCC
>Mature Secondary Structure
MVSFCCRLTRALVFTALLAIVFMVLAGCGPKTQISVSPSFRPASDVETAYVVPFGGALVP
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCEEEEEECCCCCCC
EEFSATVFNDFVDQLNGRRRETGIRSFAILKDEVSAVDPGWLARQYYISGDIWSYVEDSG
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHEEEEECCCHHHHHCCCC
CCSTNIRVKARVYVHEPGRSIPSVEIFVPMESFFDHDRSTIDRERGRLARDLARDLSQKV
CCCCCEEEEEEEEEECCCCCCCCEEEEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
LAAMAPLRPPVSSSP
HHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA