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The map label for this gene is ydhJ [C]

Identifier: 78189372

GI number: 78189372

Start: 1876262

End: 1877200

Strand: Reverse

Name: ydhJ [C]

Synonym: Cag_1409

Alternate gene names: 78189372

Gene position: 1877200-1876262 (Counterclockwise)

Preceding gene: 78189373

Following gene: 78189371

Centisome position: 72.98

GC content: 45.69

Gene sequence:

>939_bases
ATGAAAAAAAACATTGGGTTAGCTCTTGGTGGAGCCGTACTCTTTATTATGATACTGCTCTTCTTTTTTAACCCATTTAG
CGCTTCCGATAAGAGCACAACGCTTGTAACCGTGCAGCGTCGCGATGCTGTGCCGCCACCAAATTCTACGCTTCACGACT
CAACGTCGTATGCTCATGCAACAGAGGAGGCTGGCTTTATTTCGGGCATTGTTGAGCCTTATAACGATGCTACTATTGGC
TTAGTGGTGCAGGGTAAAATTGCTTCTATTTGGGTGCCTGAAGGGCGACGCGTTGGGCGTGGTGGAATTATTCTTACCCT
TGAAAAAAGCCAAGAAGAGCTTGAAGTAGCGCGTCGTAAAATTATTTGGCAAAATCAAGCGGAATTAAAATCAGCCGAAG
CGGTAGTAACAACATTAACCGAGACCTTACGTTTAAACCGCAAATTGTATGATGAAACACGCTCAGTGAGTCGTGAGGAA
CTTGATAAGTTATCCTTGCAATGGGAAAATGCGGTGGCTGAGCGCGACCGTTTACGCAACCAAAAGCTCCGTGAAAAGGT
TGAGTATGAAATTGCGGCTAAAACGCTTGATAGTCGTCTGCTGAAAGCGCCATTTAGTGGCACCGTTGAAAAGGTATTTT
TAAAGGTGGGTGAAATTTACCAACCGGGTCAACCTCTGGTGCGCTTAATTGATGCTGATCGCTGTGTACTGACGGCAAAT
ATTGATGACACCAAGAATTATAAGTTCAAGCAGGGAATGACGGTTGAATTGCATGTTATGGAGGGTAGTAGTGAGGTGAT
TCGTAAAGGCACCATTACTAAAGTGCCTATTGCGGTTGACCCTGCCAGCGGCGTGATGCAGGTAAAAGCCTTTTTTGATA
ACCGTGATGGACGCATTAAGCCGGGTACAACCGCTAAAATGCGGGTGCCTCAGGAGTAA

Upstream 100 bases:

>100_bases
GCACTCAGAGTTTCATTAGCAAATAATGACAATTCCGATATCTTATTAATTAGTATAATCTTATTATTAGAGCTGTTTAT
AAAACCATCCATTCATTTCT

Downstream 100 bases:

>100_bases
ATCAAACACTTTCTGTTATGCCGCGCAGCAATAACTCATTCGTCAGTATAAGCTTGACACGACAGTAGTATGGATGAACA
TATGAATGCAAATCTTGATG

Product: membrane-fusion protein-like protein

Products: NA

Alternate protein names: Efflux Transporter RND Family MFP Subunit; Secretion Protein HlyD Family Protein; HlyD Family Secretion Protein; Membrane-Fusion Protein; Membrane Fusion Efflux Protein; Acriflavin Resistance Protein AcrE; Membrane-Fusion Protein-Like; Efflux System

Number of amino acids: Translated: 312; Mature: 312

Protein sequence:

>312_residues
MKKNIGLALGGAVLFIMILLFFFNPFSASDKSTTLVTVQRRDAVPPPNSTLHDSTSYAHATEEAGFISGIVEPYNDATIG
LVVQGKIASIWVPEGRRVGRGGIILTLEKSQEELEVARRKIIWQNQAELKSAEAVVTTLTETLRLNRKLYDETRSVSREE
LDKLSLQWENAVAERDRLRNQKLREKVEYEIAAKTLDSRLLKAPFSGTVEKVFLKVGEIYQPGQPLVRLIDADRCVLTAN
IDDTKNYKFKQGMTVELHVMEGSSEVIRKGTITKVPIAVDPASGVMQVKAFFDNRDGRIKPGTTAKMRVPQE

Sequences:

>Translated_312_residues
MKKNIGLALGGAVLFIMILLFFFNPFSASDKSTTLVTVQRRDAVPPPNSTLHDSTSYAHATEEAGFISGIVEPYNDATIG
LVVQGKIASIWVPEGRRVGRGGIILTLEKSQEELEVARRKIIWQNQAELKSAEAVVTTLTETLRLNRKLYDETRSVSREE
LDKLSLQWENAVAERDRLRNQKLREKVEYEIAAKTLDSRLLKAPFSGTVEKVFLKVGEIYQPGQPLVRLIDADRCVLTAN
IDDTKNYKFKQGMTVELHVMEGSSEVIRKGTITKVPIAVDPASGVMQVKAFFDNRDGRIKPGTTAKMRVPQE
>Mature_312_residues
MKKNIGLALGGAVLFIMILLFFFNPFSASDKSTTLVTVQRRDAVPPPNSTLHDSTSYAHATEEAGFISGIVEPYNDATIG
LVVQGKIASIWVPEGRRVGRGGIILTLEKSQEELEVARRKIIWQNQAELKSAEAVVTTLTETLRLNRKLYDETRSVSREE
LDKLSLQWENAVAERDRLRNQKLREKVEYEIAAKTLDSRLLKAPFSGTVEKVFLKVGEIYQPGQPLVRLIDADRCVLTAN
IDDTKNYKFKQGMTVELHVMEGSSEVIRKGTITKVPIAVDPASGVMQVKAFFDNRDGRIKPGTTAKMRVPQE

Specific function: Unknown

COG id: COG0845

COG function: function code M; Membrane-fusion protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34830; Mature: 34830

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKNIGLALGGAVLFIMILLFFFNPFSASDKSTTLVTVQRRDAVPPPNSTLHDSTSYAHA
CCCCCCEEHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHH
TEEAGFISGIVEPYNDATIGLVVQGKIASIWVPEGRRVGRGGIILTLEKSQEELEVARRK
HHHCHHHHHCCCCCCCCEEEEEEECCEEEEECCCCCEECCCCEEEEECCCHHHHHHHHHH
IIWQNQAELKSAEAVVTTLTETLRLNRKLYDETRSVSREELDKLSLQWENAVAERDRLRN
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
QKLREKVEYEIAAKTLDSRLLKAPFSGTVEKVFLKVGEIYQPGQPLVRLIDADRCVLTAN
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHEECCCCEEEEEC
IDDTKNYKFKQGMTVELHVMEGSSEVIRKGTITKVPIAVDPASGVMQVKAFFDNRDGRIK
CCCCCCEEECCCCEEEEEEECCCHHHHHCCCCEEEEEEECCCCCCEEEEEEECCCCCEEC
PGTTAKMRVPQE
CCCCEEEECCCC
>Mature Secondary Structure
MKKNIGLALGGAVLFIMILLFFFNPFSASDKSTTLVTVQRRDAVPPPNSTLHDSTSYAHA
CCCCCCEEHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHH
TEEAGFISGIVEPYNDATIGLVVQGKIASIWVPEGRRVGRGGIILTLEKSQEELEVARRK
HHHCHHHHHCCCCCCCCEEEEEEECCEEEEECCCCCEECCCCEEEEECCCHHHHHHHHHH
IIWQNQAELKSAEAVVTTLTETLRLNRKLYDETRSVSREELDKLSLQWENAVAERDRLRN
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
QKLREKVEYEIAAKTLDSRLLKAPFSGTVEKVFLKVGEIYQPGQPLVRLIDADRCVLTAN
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHEECCCCEEEEEC
IDDTKNYKFKQGMTVELHVMEGSSEVIRKGTITKVPIAVDPASGVMQVKAFFDNRDGRIK
CCCCCCEEECCCCEEEEEEECCCHHHHHCCCCEEEEEEECCCCCCEEEEEEECCCCCEEC
PGTTAKMRVPQE
CCCCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA