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The map label for this gene is 78189371

Identifier: 78189371

GI number: 78189371

Start: 1874297

End: 1876192

Strand: Reverse

Name: 78189371

Synonym: Cag_1408

Alternate gene names: NA

Gene position: 1876192-1874297 (Counterclockwise)

Preceding gene: 78189372

Following gene: 78189370

Centisome position: 72.94

GC content: 49.42

Gene sequence:

>1896_bases
ATGGATGAACATATGAATGCAAATCTTGATGCAAGTTTAAGTGCCTTACGTGCTCTTCGCGATTTTAAGGGGAGGGAGGG
TGAATTTTGGCTCTCTATGGCAACCCACATTTCTCGCCTTTTTCAAGCGGAACGTGTGGTGCTGCTGCGTCGTGCAGAGG
TAGGATGGAACCCGTTAAGCTTTTGGCCGCTTGCTTCGGCTCGTTCAGCGATTCCCCCATCAGCACAGCTTGCTGAGCTT
GCAACTACCGCCAAGCAAACGGCTGTTGCCTATGCTCCGCTGCCTGAGCAACTTGGCACAACATTGCAACATGCGGTTTC
AACGGCAGCCGAACAGTCGTCAGAAAAAAAAGCTGACAACATATCAGGCAACACGTTGCTTGCATTTCATCTCCATACCG
AAAGTGCTGATGGTGAAATAATGGCGCTCTTATGGCGAGCGCACGATAGTGCTGCATTGCGCAATGGCGATCTGCTTAAA
CGAGAGCTGTTAGTTGACCTTCCATTGCAATATCGTCAAAGCAACACAACTCGTCCACTTACCTCCGCTACGCCTGAATC
ACTTGATGTTGTGCTCAGTATGAATGAGCACACAACTTTTACGGGTGCGGCAATGTCGCTCTGTAATGAGCTTGCATTTC
GTTTAAGCTGTTCGCGTGTAAGCATTGGGTGGAAAGATGGTGAGTATATTCGTTTGCAAGCGGTAAGCCACACCGAAAAG
TTCGACCGTAAAATGAGCGTGGCGCGAGCGTTGGAAGTGGTAATGGAGGAGTGTTTTGATCAAGATGAAGAGCTGCTTGT
GCCCGAAGTAGCAGGCACCTCCACCACCATTATTCGAGAGCATCGGGCATTTGTGGCAAAGCAAGGGGTGGGTGCCATCC
TTTCGCTGCCGTTGCGGCTTGGCAATGAGGTGGTTGCGGTGTTAAGCTGCGAGCGCGACAAACCCTTTAGTGCCGACGAC
ATTCGTAGCCTTCGCATTATTTGCGACCAAGTAACGCGCCGACTTGGCGACCTCAAGCATTTTGACCGTTGGTTTGGCGC
TGTAGCGCTTGATAAGGTACGCAATTGGGCATCATCCCTTATTGGTACCGATAAAACCGTGCATAAAATTTATGCCGTAG
TGGGCAGTATCCTCCTTCTCTTCTTGCTTTTTGGCAAAATGGAGTACAAGGTAGAAGCTCCCTTTATTCTTCGTACTCAC
GATCTTGCCCTTCTTTCAGCTCCTTTTGATGGCTACATCGAACGTGTAAGCCGCAAGCCGGGCGATTTGGTAACAACGGG
CGATCCACTTATCCTCCTCGATACTCGCCAACTTTTGCTTGAAGAATCGCGTTCTGCTGCCGATGTGTTGCGTTATCAAC
AGGAGGAGAAAAAAGCTATGGCTCAAAATGCCTTAGCCGAAATGAAGGTTGCCGAAGCCTTGCGCCGCCAAGCCGACAGC
CGTTACCAAATGATTCGCTACAACTTACAGCACGCTGATATTCGAGCACCCTTTAGCGGTATAGTGGTTGAGGGCGATCT
TGAAAAGTTGCTTGGAGCGCCCGTGCGTAAGGGTGATGTGCTCTTAAAAGTAGCCAAGCTTGAAAAGCTCTACATTGAAA
TTAAAGTGGCAGAGCGCGACATTCAAGAATTTAAGGTAGGGCAAGAGGGCGAAGTGGCGTTTATAAGTCAGCCAAGCAAA
AAATATACCGTTGTTGTTGATCGCATTGAACCGATGGCGGTAACCGAGCAAAAAGGCAACGTCTTTTTAGTATTGGGGCA
TATTACCGAAGCGCGTGATGCGTGGTGGCGCCCCGGCATGAGCGGTTTAGCAAAAGTAAGTGTTGGAGAGCGCCACATTT
TGTGGATTTGGCTCCACCGCACGCTTGATTTCTTCTCCATGAAACTTTGGTGGTAA

Upstream 100 bases:

>100_bases
AACCGCTAAAATGCGGGTGCCTCAGGAGTAAATCAAACACTTTCTGTTATGCCGCGCAGCAATAACTCATTCGTCAGTAT
AAGCTTGACACGACAGTAGT

Downstream 100 bases:

>100_bases
ATGGCAGGCGAAGGCACAACCTATAGCGAGTCGTGGCACCTTGTTGCCAACCTCCATCTTAAATTGCGTTCCACCGTTGA
GGTGCAACGCCAATTTTACA

Product: membrane-fusion protein-like protein

Products: NA

Alternate protein names: Phytochrome Sensor Protein; GAF Domain Protein; Membrane-Fusion Protein; Signal Transduction Protein; Membrane-Fusion Protein-Like; GAF Domain-Containing; Membrane-Fusion Protein-Like Protein

Number of amino acids: Translated: 631; Mature: 631

Protein sequence:

>631_residues
MDEHMNANLDASLSALRALRDFKGREGEFWLSMATHISRLFQAERVVLLRRAEVGWNPLSFWPLASARSAIPPSAQLAEL
ATTAKQTAVAYAPLPEQLGTTLQHAVSTAAEQSSEKKADNISGNTLLAFHLHTESADGEIMALLWRAHDSAALRNGDLLK
RELLVDLPLQYRQSNTTRPLTSATPESLDVVLSMNEHTTFTGAAMSLCNELAFRLSCSRVSIGWKDGEYIRLQAVSHTEK
FDRKMSVARALEVVMEECFDQDEELLVPEVAGTSTTIIREHRAFVAKQGVGAILSLPLRLGNEVVAVLSCERDKPFSADD
IRSLRIICDQVTRRLGDLKHFDRWFGAVALDKVRNWASSLIGTDKTVHKIYAVVGSILLLFLLFGKMEYKVEAPFILRTH
DLALLSAPFDGYIERVSRKPGDLVTTGDPLILLDTRQLLLEESRSAADVLRYQQEEKKAMAQNALAEMKVAEALRRQADS
RYQMIRYNLQHADIRAPFSGIVVEGDLEKLLGAPVRKGDVLLKVAKLEKLYIEIKVAERDIQEFKVGQEGEVAFISQPSK
KYTVVVDRIEPMAVTEQKGNVFLVLGHITEARDAWWRPGMSGLAKVSVGERHILWIWLHRTLDFFSMKLWW

Sequences:

>Translated_631_residues
MDEHMNANLDASLSALRALRDFKGREGEFWLSMATHISRLFQAERVVLLRRAEVGWNPLSFWPLASARSAIPPSAQLAEL
ATTAKQTAVAYAPLPEQLGTTLQHAVSTAAEQSSEKKADNISGNTLLAFHLHTESADGEIMALLWRAHDSAALRNGDLLK
RELLVDLPLQYRQSNTTRPLTSATPESLDVVLSMNEHTTFTGAAMSLCNELAFRLSCSRVSIGWKDGEYIRLQAVSHTEK
FDRKMSVARALEVVMEECFDQDEELLVPEVAGTSTTIIREHRAFVAKQGVGAILSLPLRLGNEVVAVLSCERDKPFSADD
IRSLRIICDQVTRRLGDLKHFDRWFGAVALDKVRNWASSLIGTDKTVHKIYAVVGSILLLFLLFGKMEYKVEAPFILRTH
DLALLSAPFDGYIERVSRKPGDLVTTGDPLILLDTRQLLLEESRSAADVLRYQQEEKKAMAQNALAEMKVAEALRRQADS
RYQMIRYNLQHADIRAPFSGIVVEGDLEKLLGAPVRKGDVLLKVAKLEKLYIEIKVAERDIQEFKVGQEGEVAFISQPSK
KYTVVVDRIEPMAVTEQKGNVFLVLGHITEARDAWWRPGMSGLAKVSVGERHILWIWLHRTLDFFSMKLWW
>Mature_631_residues
MDEHMNANLDASLSALRALRDFKGREGEFWLSMATHISRLFQAERVVLLRRAEVGWNPLSFWPLASARSAIPPSAQLAEL
ATTAKQTAVAYAPLPEQLGTTLQHAVSTAAEQSSEKKADNISGNTLLAFHLHTESADGEIMALLWRAHDSAALRNGDLLK
RELLVDLPLQYRQSNTTRPLTSATPESLDVVLSMNEHTTFTGAAMSLCNELAFRLSCSRVSIGWKDGEYIRLQAVSHTEK
FDRKMSVARALEVVMEECFDQDEELLVPEVAGTSTTIIREHRAFVAKQGVGAILSLPLRLGNEVVAVLSCERDKPFSADD
IRSLRIICDQVTRRLGDLKHFDRWFGAVALDKVRNWASSLIGTDKTVHKIYAVVGSILLLFLLFGKMEYKVEAPFILRTH
DLALLSAPFDGYIERVSRKPGDLVTTGDPLILLDTRQLLLEESRSAADVLRYQQEEKKAMAQNALAEMKVAEALRRQADS
RYQMIRYNLQHADIRAPFSGIVVEGDLEKLLGAPVRKGDVLLKVAKLEKLYIEIKVAERDIQEFKVGQEGEVAFISQPSK
KYTVVVDRIEPMAVTEQKGNVFLVLGHITEARDAWWRPGMSGLAKVSVGERHILWIWLHRTLDFFSMKLWW

Specific function: Unknown

COG id: COG0845

COG function: function code M; Membrane-fusion protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 70823; Mature: 70823

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDEHMNANLDASLSALRALRDFKGREGEFWLSMATHISRLFQAERVVLLRRAEVGWNPLS
CCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHEEHHCCCCCCCC
FWPLASARSAIPPSAQLAELATTAKQTAVAYAPLPEQLGTTLQHAVSTAAEQSSEKKADN
CCCCCCCCCCCCCCHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCC
ISGNTLLAFHLHTESADGEIMALLWRAHDSAALRNGDLLKRELLVDLPLQYRQSNTTRPL
CCCCEEEEEEEECCCCCCCEEEEEEECCCCHHHCCCCHHHHHHHHCCCHHHCCCCCCCCC
TSATPESLDVVLSMNEHTTFTGAAMSLCNELAFRLSCSRVSIGWKDGEYIRLQAVSHTEK
CCCCCCCEEEEEEECCCCEEHHHHHHHHHHHHHHEEECEEEECCCCCCEEEEEEEHHHHH
FDRKMSVARALEVVMEECFDQDEELLVPEVAGTSTTIIREHRAFVAKQGVGAILSLPLRL
HHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHC
GNEVVAVLSCERDKPFSADDIRSLRIICDQVTRRLGDLKHFDRWFGAVALDKVRNWASSL
CCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGTDKTVHKIYAVVGSILLLFLLFGKMEYKVEAPFILRTHDLALLSAPFDGYIERVSRKP
HCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCEEEEECCEEEEECCHHHHHHHHHCCC
GDLVTTGDPLILLDTRQLLLEESRSAADVLRYQQEEKKAMAQNALAEMKVAEALRRQADS
CCEEECCCCEEEECCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
RYQMIRYNLQHADIRAPFSGIVVEGDLEKLLGAPVRKGDVLLKVAKLEKLYIEIKVAERD
HHHHHHCCCCCCCCCCCCCCEEEECCHHHHCCCCCCCCHHEEEHHHEEEEEEEEEEHHHH
IQEFKVGQEGEVAFISQPSKKYTVVVDRIEPMAVTEQKGNVFLVLGHITEARDAWWRPGM
HHHHCCCCCCCEEEEECCCCCEEEEEECCCCEEEEECCCCEEEEEECCCHHHHHHCCCCC
SGLAKVSVGERHILWIWLHRTLDFFSMKLWW
CCCEEEECCCCEEEEEEEEHHHHHHHHEECC
>Mature Secondary Structure
MDEHMNANLDASLSALRALRDFKGREGEFWLSMATHISRLFQAERVVLLRRAEVGWNPLS
CCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHEEHHCCCCCCCC
FWPLASARSAIPPSAQLAELATTAKQTAVAYAPLPEQLGTTLQHAVSTAAEQSSEKKADN
CCCCCCCCCCCCCCHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCC
ISGNTLLAFHLHTESADGEIMALLWRAHDSAALRNGDLLKRELLVDLPLQYRQSNTTRPL
CCCCEEEEEEEECCCCCCCEEEEEEECCCCHHHCCCCHHHHHHHHCCCHHHCCCCCCCCC
TSATPESLDVVLSMNEHTTFTGAAMSLCNELAFRLSCSRVSIGWKDGEYIRLQAVSHTEK
CCCCCCCEEEEEEECCCCEEHHHHHHHHHHHHHHEEECEEEECCCCCCEEEEEEEHHHHH
FDRKMSVARALEVVMEECFDQDEELLVPEVAGTSTTIIREHRAFVAKQGVGAILSLPLRL
HHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHC
GNEVVAVLSCERDKPFSADDIRSLRIICDQVTRRLGDLKHFDRWFGAVALDKVRNWASSL
CCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGTDKTVHKIYAVVGSILLLFLLFGKMEYKVEAPFILRTHDLALLSAPFDGYIERVSRKP
HCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCEEEEECCEEEEECCHHHHHHHHHCCC
GDLVTTGDPLILLDTRQLLLEESRSAADVLRYQQEEKKAMAQNALAEMKVAEALRRQADS
CCEEECCCCEEEECCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
RYQMIRYNLQHADIRAPFSGIVVEGDLEKLLGAPVRKGDVLLKVAKLEKLYIEIKVAERD
HHHHHHCCCCCCCCCCCCCCEEEECCHHHHCCCCCCCCHHEEEHHHEEEEEEEEEEHHHH
IQEFKVGQEGEVAFISQPSKKYTVVVDRIEPMAVTEQKGNVFLVLGHITEARDAWWRPGM
HHHHCCCCCCCEEEEECCCCCEEEEEECCCCEEEEECCCCEEEEEECCCHHHHHHCCCCC
SGLAKVSVGERHILWIWLHRTLDFFSMKLWW
CCCEEEECCCCEEEEEEEEHHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA