| Definition | Chlorobium chlorochromatii CaD3 chromosome, complete genome. |
|---|---|
| Accession | NC_007514 |
| Length | 2,572,079 |
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The map label for this gene is bglIIM [H]
Identifier: 78189365
GI number: 78189365
Start: 1866280
End: 1867074
Strand: Reverse
Name: bglIIM [H]
Synonym: Cag_1402
Alternate gene names: 78189365
Gene position: 1867074-1866280 (Counterclockwise)
Preceding gene: 78189366
Following gene: 78189364
Centisome position: 72.59
GC content: 32.7
Gene sequence:
>795_bases ATGAAATTTCCTGATGATTATATCAATACCATTATTTGTGCGGATAGCTTAACTGTTATGGAGCAAATGCCAGATAAGTG TATAGATATAGCTGTTACTTCACCACCGTATAATCTTAAAAATTCGACAGGTAATGGTATGAAAGCCAATACCAAAAGTG GTAAATGGGCAGGAAATGCACTACAAAATGGCTATAGCCACTATAACGATAATATTCCAAATGATGAATATGCTGAATGG CAATACAATTGCTTGAAAGCAATGTATCGTCTTTTAAAAGACGATGGTGCTATTTTTTATAATCATAAATGGCGTGTGCA AAATGGATTAATTCAAGACCGAACAGATATTATTAGAGATTTACCAGTTCGGCAAATTATTATATGGAAAAGAAAAGGTG GTATTAATTTTAACCCGGGTTATTTTCTGCCTACCTATGAAGTTATTTATCTCATTGCAAAGCCAAGCTTTAAACTTCTA CCTAAAGCTAATGCTTATGGAGATGTTTGGGAATTTACCCAAGAAATGAAAAATAATCATCCCGCACCATTTCCAGTAGC TCTTATTGATAGAATTATTTCATCAACTTCGGCTCAAATCATTTTAGACCCTTTTATGGGTAGTGGTACAACTGCTGTTG CAGCTTTACAGTTACAACGCAATTATATAGGTATTGATATTTCTCCTGATTATTGTGAGATGGCAAAAGAACGAATTTTA AACTTGAATCCAGCTAAAAGATTTATTAAGAAAAATGGTTTAGAAACAATCTCTTTATTTGAAAAAATTGTATGA
Upstream 100 bases:
>100_bases ATTCTAAACAATATCTTGAACAGCGCTCAAATTTTCGTTTACTTGCCAAGTGAATTTTTAAGGATATTTTTTCATTAAAA GAAAAGCATTAAAAATCCGT
Downstream 100 bases:
>100_bases AAATCTATACCAAAGAAGAACTAATCCAATCGTTGAAAATTATTGCAGCACAAGGATGGATAGAAAATGCGCGTCATGGT AATCATGGTGGTATAGGTAA
Product: DNA modification methylase-like protein
Products: NA
Alternate protein names: M.BglII; N(4)- cytosine-specific methyltransferase BglII [H]
Number of amino acids: Translated: 264; Mature: 264
Protein sequence:
>264_residues MKFPDDYINTIICADSLTVMEQMPDKCIDIAVTSPPYNLKNSTGNGMKANTKSGKWAGNALQNGYSHYNDNIPNDEYAEW QYNCLKAMYRLLKDDGAIFYNHKWRVQNGLIQDRTDIIRDLPVRQIIIWKRKGGINFNPGYFLPTYEVIYLIAKPSFKLL PKANAYGDVWEFTQEMKNNHPAPFPVALIDRIISSTSAQIILDPFMGSGTTAVAALQLQRNYIGIDISPDYCEMAKERIL NLNPAKRFIKKNGLETISLFEKIV
Sequences:
>Translated_264_residues MKFPDDYINTIICADSLTVMEQMPDKCIDIAVTSPPYNLKNSTGNGMKANTKSGKWAGNALQNGYSHYNDNIPNDEYAEW QYNCLKAMYRLLKDDGAIFYNHKWRVQNGLIQDRTDIIRDLPVRQIIIWKRKGGINFNPGYFLPTYEVIYLIAKPSFKLL PKANAYGDVWEFTQEMKNNHPAPFPVALIDRIISSTSAQIILDPFMGSGTTAVAALQLQRNYIGIDISPDYCEMAKERIL NLNPAKRFIKKNGLETISLFEKIV >Mature_264_residues MKFPDDYINTIICADSLTVMEQMPDKCIDIAVTSPPYNLKNSTGNGMKANTKSGKWAGNALQNGYSHYNDNIPNDEYAEW QYNCLKAMYRLLKDDGAIFYNHKWRVQNGLIQDRTDIIRDLPVRQIIIWKRKGGINFNPGYFLPTYEVIYLIAKPSFKLL PKANAYGDVWEFTQEMKNNHPAPFPVALIDRIISSTSAQIILDPFMGSGTTAVAALQLQRNYIGIDISPDYCEMAKERIL NLNPAKRFIKKNGLETISLFEKIV
Specific function: This methylase recognizes the double-stranded sequence AGATCT, causes specific methylation on C-5 on both strands, and protects the DNA from cleavage by the BglII endonuclease [H]
COG id: COG0863
COG function: function code L; DNA modification methylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N(4)/N(6)-methyltransferase family. N(4) subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002941 - InterPro: IPR017985 - InterPro: IPR001091 [H]
Pfam domain/function: PF01555 N6_N4_Mtase [H]
EC number: =2.1.1.113 [H]
Molecular weight: Translated: 30086; Mature: 30086
Theoretical pI: Translated: 8.54; Mature: 8.54
Prosite motif: PS00093 N4_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFPDDYINTIICADSLTVMEQMPDKCIDIAVTSPPYNLKNSTGNGMKANTKSGKWAGNA CCCCHHHHHHHHHCCHHHHHHHCCHHHEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHH LQNGYSHYNDNIPNDEYAEWQYNCLKAMYRLLKDDGAIFYNHKWRVQNGLIQDRTDIIRD HHCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECEEEECCCCHHHHHHHHHH LPVRQIIIWKRKGGINFNPGYFLPTYEVIYLIAKPSFKLLPKANAYGDVWEFTQEMKNNH CCCCEEEEEEECCCCCCCCCCCCCHHHEEEEEECCCEEECCCCCCCHHHHHHHHHHHCCC PAPFPVALIDRIISSTSAQIILDPFMGSGTTAVAALQLQRNYIGIDISPDYCEMAKERIL CCCCHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHEEECCCEEEEECCCHHHHHHHHHHC NLNPAKRFIKKNGLETISLFEKIV CCCHHHHHHHHCCCHHHHHHHHCC >Mature Secondary Structure MKFPDDYINTIICADSLTVMEQMPDKCIDIAVTSPPYNLKNSTGNGMKANTKSGKWAGNA CCCCHHHHHHHHHCCHHHHHHHCCHHHEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHH LQNGYSHYNDNIPNDEYAEWQYNCLKAMYRLLKDDGAIFYNHKWRVQNGLIQDRTDIIRD HHCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECEEEECCCCHHHHHHHHHH LPVRQIIIWKRKGGINFNPGYFLPTYEVIYLIAKPSFKLLPKANAYGDVWEFTQEMKNNH CCCCEEEEEEECCCCCCCCCCCCCHHHEEEEEECCCEEECCCCCCCHHHHHHHHHHHCCC PAPFPVALIDRIISSTSAQIILDPFMGSGTTAVAALQLQRNYIGIDISPDYCEMAKERIL CCCCHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHEEECCCEEEEECCCHHHHHHHHHHC NLNPAKRFIKKNGLETISLFEKIV CCCHHHHHHHHCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9073062 [H]