Definition Chlorobium chlorochromatii CaD3 chromosome, complete genome.
Accession NC_007514
Length 2,572,079

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The map label for this gene is 78189269

Identifier: 78189269

GI number: 78189269

Start: 1771601

End: 1771909

Strand: Reverse

Name: 78189269

Synonym: Cag_1304

Alternate gene names: NA

Gene position: 1771909-1771601 (Counterclockwise)

Preceding gene: 78189286

Following gene: 78189264

Centisome position: 68.89

GC content: 49.84

Gene sequence:

>309_bases
GTGGCTTTTATTAAACAAATAAGTAACGCTATGGATGCTCAATTATTACAAATAACCGCTCAGGTACTGTTTGAAAAGCT
GCAAAGCTTACGCTCAAAAATGCAGGATGATGTTGCTACGCCCGATGACCGTGTGGCGGCGGCAATGCTTGAGGAGGTTG
TTGCCCTTGCACGGAATCGCTACTGTGTGGCTGGCAATGAGGCTGAGTTTCAGCAAGGTAAGAGCGTATGGGTAGAGCGC
ACGGCGGCTACACATTTTCCGCACATTCGCTTGCATGGTGGGGCACTTGAGGACGATCCGATTGCGTGA

Upstream 100 bases:

>100_bases
TGTGATGGCTCAATAATAAAAAAAATCTTCTATCCCCCAAACTTTTTTTCTGCCACACCTCTTTTTTTTAAAGTTCTAAG
GGAAGTGCAAGAGGGGGAGT

Downstream 100 bases:

>100_bases
GTTTGCGTGGCGGAGAGTGGGGATGATGGCTATCTTCGTCTTGGTTTTTCAATTGGAACAATTGGTTCGTAAGCTTTTAA
GCCGTTATCGCCTGTAAGGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 102; Mature: 101

Protein sequence:

>102_residues
MAFIKQISNAMDAQLLQITAQVLFEKLQSLRSKMQDDVATPDDRVAAAMLEEVVALARNRYCVAGNEAEFQQGKSVWVER
TAATHFPHIRLHGGALEDDPIA

Sequences:

>Translated_102_residues
MAFIKQISNAMDAQLLQITAQVLFEKLQSLRSKMQDDVATPDDRVAAAMLEEVVALARNRYCVAGNEAEFQQGKSVWVER
TAATHFPHIRLHGGALEDDPIA
>Mature_101_residues
AFIKQISNAMDAQLLQITAQVLFEKLQSLRSKMQDDVATPDDRVAAAMLEEVVALARNRYCVAGNEAEFQQGKSVWVERT
AATHFPHIRLHGGALEDDPIA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11309; Mature: 11178

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFIKQISNAMDAQLLQITAQVLFEKLQSLRSKMQDDVATPDDRVAAAMLEEVVALARNR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCC
YCVAGNEAEFQQGKSVWVERTAATHFPHIRLHGGALEDDPIA
EEECCCHHHHHCCHHHHHHHHHHHCCCEEEEECCCCCCCCCC
>Mature Secondary Structure 
AFIKQISNAMDAQLLQITAQVLFEKLQSLRSKMQDDVATPDDRVAAAMLEEVVALARNR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCC
YCVAGNEAEFQQGKSVWVERTAATHFPHIRLHGGALEDDPIA
EEECCCHHHHHCCHHHHHHHHHHHCCCEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA