Definition Chlorobium chlorochromatii CaD3 chromosome, complete genome.
Accession NC_007514
Length 2,572,079

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The map label for this gene is 78189100

Identifier: 78189100

GI number: 78189100

Start: 1526758

End: 1527714

Strand: Reverse

Name: 78189100

Synonym: Cag_1133

Alternate gene names: NA

Gene position: 1527714-1526758 (Counterclockwise)

Preceding gene: 78189101

Following gene: 78189099

Centisome position: 59.4

GC content: 43.99

Gene sequence:

>957_bases
ATGAGGAAAAAAATTCTCTTTATTTGTGGATCCATGAACCAAACCACCCAAATGCACCAAATTTCGGAGTGGCTTGGCGA
CTACGACCACTTTTTTTGCCCCTTCTTTAGCGATGGTTTGCTTGGAGTGGCAACCAAACTTGGCTTGCTGGAATTTACCA
TTATGGGCAAAAAACGCTCCAGCAAAGCGTTGGAATATCTCCATTCCCACCATTTACAAGTTGATGAAAGCGGAGCAGCC
CATCCCTACGATTTAGTGGTTACCTGCACCGATTTAATTGTGCCAAAGATTTTTCAGCAGCGCAAAATGGTATTAGTGCA
AGAGGGGATGACGGAGCCTGAAACACTTTTTTATCATCTTGCACGCAACGTCAAATGGATTCCACGTTGGATTGCAGGCA
CTTCAACCACCGGACTTTCCGATGCCTATCAAAAATTTTGCGTTGCCAGCGAAGGCTATCGCCAACTTTTTATTCGCAAA
GGCGTTAATCCCAATAAAATTGAAGTTACCAGCATTCCCAACTTTGATAACTGCGCTCACTATCTCCAGAACGATTTTCC
CTATAAAGACTACGTGCTGGTTTGCACCTCCGATAACCGTGAAACCTTTATTTATGAGAATCGCCGAAAGAATATTGAGA
AGTACGTAGCTATGGCAGCAGGGCGACAACTTATTTTTAAATTGCATCCCAACGAAAATGTAGAACGAGCCACACGCGAA
ATTAAGCAATATGCACCGGGTAGCCTTGTGTTTAGCGAAGGCAAAACCGAAGAGATGATTGCCAATTGCGCTATGATGAT
AGCACAATTTTCGTCCACCATTTTTGTAGGTTCAGCACTTGGTAAAGAGGTTCATTGCGGTTTGCCGACTGATGAGCTGA
AAGCATTAACGCCGTTGCAAAACAACTCGGCAGCAAAAAATATAGCCGATGTTTGTAGGGAAGTGGTGGAGCAGTGA

Upstream 100 bases:

>100_bases
GTCGCTTAAAAGAGTTGCTTTGGTACGCTCTCGGATATGTTTTGATGTTCTTTTCAGGCATCCATTTAGGCGATGCAGCA
AGCTTGCAAGGGGAGGCGGA

Downstream 100 bases:

>100_bases
GGAATGATTTTTGATGTTGTATTATAGATTCTGAATTGTCAATGCGGAGCGAAGCAAAGAATCCATTTTTTGCACTATCT
TTAAACTCCGATGTATAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 318; Mature: 318

Protein sequence:

>318_residues
MRKKILFICGSMNQTTQMHQISEWLGDYDHFFCPFFSDGLLGVATKLGLLEFTIMGKKRSSKALEYLHSHHLQVDESGAA
HPYDLVVTCTDLIVPKIFQQRKMVLVQEGMTEPETLFYHLARNVKWIPRWIAGTSTTGLSDAYQKFCVASEGYRQLFIRK
GVNPNKIEVTSIPNFDNCAHYLQNDFPYKDYVLVCTSDNRETFIYENRRKNIEKYVAMAAGRQLIFKLHPNENVERATRE
IKQYAPGSLVFSEGKTEEMIANCAMMIAQFSSTIFVGSALGKEVHCGLPTDELKALTPLQNNSAAKNIADVCREVVEQ

Sequences:

>Translated_318_residues
MRKKILFICGSMNQTTQMHQISEWLGDYDHFFCPFFSDGLLGVATKLGLLEFTIMGKKRSSKALEYLHSHHLQVDESGAA
HPYDLVVTCTDLIVPKIFQQRKMVLVQEGMTEPETLFYHLARNVKWIPRWIAGTSTTGLSDAYQKFCVASEGYRQLFIRK
GVNPNKIEVTSIPNFDNCAHYLQNDFPYKDYVLVCTSDNRETFIYENRRKNIEKYVAMAAGRQLIFKLHPNENVERATRE
IKQYAPGSLVFSEGKTEEMIANCAMMIAQFSSTIFVGSALGKEVHCGLPTDELKALTPLQNNSAAKNIADVCREVVEQ
>Mature_318_residues
MRKKILFICGSMNQTTQMHQISEWLGDYDHFFCPFFSDGLLGVATKLGLLEFTIMGKKRSSKALEYLHSHHLQVDESGAA
HPYDLVVTCTDLIVPKIFQQRKMVLVQEGMTEPETLFYHLARNVKWIPRWIAGTSTTGLSDAYQKFCVASEGYRQLFIRK
GVNPNKIEVTSIPNFDNCAHYLQNDFPYKDYVLVCTSDNRETFIYENRRKNIEKYVAMAAGRQLIFKLHPNENVERATRE
IKQYAPGSLVFSEGKTEEMIANCAMMIAQFSSTIFVGSALGKEVHCGLPTDELKALTPLQNNSAAKNIADVCREVVEQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36143; Mature: 36143

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKKILFICGSMNQTTQMHQISEWLGDYDHFFCPFFSDGLLGVATKLGLLEFTIMGKKRS
CCCEEEEEECCCCCHHHHHHHHHHHCCCCCEECCHHCCCHHHHHHHHHHHEEEEECCCCH
SKALEYLHSHHLQVDESGAAHPYDLVVTCTDLIVPKIFQQRKMVLVQEGMTEPETLFYHL
HHHHHHHHHHCCEECCCCCCCCEEHEEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
ARNVKWIPRWIAGTSTTGLSDAYQKFCVASEGYRQLFIRKGVNPNKIEVTSIPNFDNCAH
HHCCHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEEEECCCHHHHHH
YLQNDFPYKDYVLVCTSDNRETFIYENRRKNIEKYVAMAAGRQLIFKLHPNENVERATRE
HHHCCCCCCCEEEEEECCCCEEEEECHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHH
IKQYAPGSLVFSEGKTEEMIANCAMMIAQFSSTIFVGSALGKEVHCGLPTDELKALTPLQ
HHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHEEEEHHCCCCEECCCCHHHHHHHCCCC
NNSAAKNIADVCREVVEQ
CCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRKKILFICGSMNQTTQMHQISEWLGDYDHFFCPFFSDGLLGVATKLGLLEFTIMGKKRS
CCCEEEEEECCCCCHHHHHHHHHHHCCCCCEECCHHCCCHHHHHHHHHHHEEEEECCCCH
SKALEYLHSHHLQVDESGAAHPYDLVVTCTDLIVPKIFQQRKMVLVQEGMTEPETLFYHL
HHHHHHHHHHCCEECCCCCCCCEEHEEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
ARNVKWIPRWIAGTSTTGLSDAYQKFCVASEGYRQLFIRKGVNPNKIEVTSIPNFDNCAH
HHCCHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEEEECCCHHHHHH
YLQNDFPYKDYVLVCTSDNRETFIYENRRKNIEKYVAMAAGRQLIFKLHPNENVERATRE
HHHCCCCCCCEEEEEECCCCEEEEECHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHH
IKQYAPGSLVFSEGKTEEMIANCAMMIAQFSSTIFVGSALGKEVHCGLPTDELKALTPLQ
HHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHEEEEHHCCCCEECCCCHHHHHHHCCCC
NNSAAKNIADVCREVVEQ
CCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA