| Definition | Chlorobium chlorochromatii CaD3 chromosome, complete genome. |
|---|---|
| Accession | NC_007514 |
| Length | 2,572,079 |
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The map label for this gene is 78189100
Identifier: 78189100
GI number: 78189100
Start: 1526758
End: 1527714
Strand: Reverse
Name: 78189100
Synonym: Cag_1133
Alternate gene names: NA
Gene position: 1527714-1526758 (Counterclockwise)
Preceding gene: 78189101
Following gene: 78189099
Centisome position: 59.4
GC content: 43.99
Gene sequence:
>957_bases ATGAGGAAAAAAATTCTCTTTATTTGTGGATCCATGAACCAAACCACCCAAATGCACCAAATTTCGGAGTGGCTTGGCGA CTACGACCACTTTTTTTGCCCCTTCTTTAGCGATGGTTTGCTTGGAGTGGCAACCAAACTTGGCTTGCTGGAATTTACCA TTATGGGCAAAAAACGCTCCAGCAAAGCGTTGGAATATCTCCATTCCCACCATTTACAAGTTGATGAAAGCGGAGCAGCC CATCCCTACGATTTAGTGGTTACCTGCACCGATTTAATTGTGCCAAAGATTTTTCAGCAGCGCAAAATGGTATTAGTGCA AGAGGGGATGACGGAGCCTGAAACACTTTTTTATCATCTTGCACGCAACGTCAAATGGATTCCACGTTGGATTGCAGGCA CTTCAACCACCGGACTTTCCGATGCCTATCAAAAATTTTGCGTTGCCAGCGAAGGCTATCGCCAACTTTTTATTCGCAAA GGCGTTAATCCCAATAAAATTGAAGTTACCAGCATTCCCAACTTTGATAACTGCGCTCACTATCTCCAGAACGATTTTCC CTATAAAGACTACGTGCTGGTTTGCACCTCCGATAACCGTGAAACCTTTATTTATGAGAATCGCCGAAAGAATATTGAGA AGTACGTAGCTATGGCAGCAGGGCGACAACTTATTTTTAAATTGCATCCCAACGAAAATGTAGAACGAGCCACACGCGAA ATTAAGCAATATGCACCGGGTAGCCTTGTGTTTAGCGAAGGCAAAACCGAAGAGATGATTGCCAATTGCGCTATGATGAT AGCACAATTTTCGTCCACCATTTTTGTAGGTTCAGCACTTGGTAAAGAGGTTCATTGCGGTTTGCCGACTGATGAGCTGA AAGCATTAACGCCGTTGCAAAACAACTCGGCAGCAAAAAATATAGCCGATGTTTGTAGGGAAGTGGTGGAGCAGTGA
Upstream 100 bases:
>100_bases GTCGCTTAAAAGAGTTGCTTTGGTACGCTCTCGGATATGTTTTGATGTTCTTTTCAGGCATCCATTTAGGCGATGCAGCA AGCTTGCAAGGGGAGGCGGA
Downstream 100 bases:
>100_bases GGAATGATTTTTGATGTTGTATTATAGATTCTGAATTGTCAATGCGGAGCGAAGCAAAGAATCCATTTTTTGCACTATCT TTAAACTCCGATGTATAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 318; Mature: 318
Protein sequence:
>318_residues MRKKILFICGSMNQTTQMHQISEWLGDYDHFFCPFFSDGLLGVATKLGLLEFTIMGKKRSSKALEYLHSHHLQVDESGAA HPYDLVVTCTDLIVPKIFQQRKMVLVQEGMTEPETLFYHLARNVKWIPRWIAGTSTTGLSDAYQKFCVASEGYRQLFIRK GVNPNKIEVTSIPNFDNCAHYLQNDFPYKDYVLVCTSDNRETFIYENRRKNIEKYVAMAAGRQLIFKLHPNENVERATRE IKQYAPGSLVFSEGKTEEMIANCAMMIAQFSSTIFVGSALGKEVHCGLPTDELKALTPLQNNSAAKNIADVCREVVEQ
Sequences:
>Translated_318_residues MRKKILFICGSMNQTTQMHQISEWLGDYDHFFCPFFSDGLLGVATKLGLLEFTIMGKKRSSKALEYLHSHHLQVDESGAA HPYDLVVTCTDLIVPKIFQQRKMVLVQEGMTEPETLFYHLARNVKWIPRWIAGTSTTGLSDAYQKFCVASEGYRQLFIRK GVNPNKIEVTSIPNFDNCAHYLQNDFPYKDYVLVCTSDNRETFIYENRRKNIEKYVAMAAGRQLIFKLHPNENVERATRE IKQYAPGSLVFSEGKTEEMIANCAMMIAQFSSTIFVGSALGKEVHCGLPTDELKALTPLQNNSAAKNIADVCREVVEQ >Mature_318_residues MRKKILFICGSMNQTTQMHQISEWLGDYDHFFCPFFSDGLLGVATKLGLLEFTIMGKKRSSKALEYLHSHHLQVDESGAA HPYDLVVTCTDLIVPKIFQQRKMVLVQEGMTEPETLFYHLARNVKWIPRWIAGTSTTGLSDAYQKFCVASEGYRQLFIRK GVNPNKIEVTSIPNFDNCAHYLQNDFPYKDYVLVCTSDNRETFIYENRRKNIEKYVAMAAGRQLIFKLHPNENVERATRE IKQYAPGSLVFSEGKTEEMIANCAMMIAQFSSTIFVGSALGKEVHCGLPTDELKALTPLQNNSAAKNIADVCREVVEQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36143; Mature: 36143
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKKILFICGSMNQTTQMHQISEWLGDYDHFFCPFFSDGLLGVATKLGLLEFTIMGKKRS CCCEEEEEECCCCCHHHHHHHHHHHCCCCCEECCHHCCCHHHHHHHHHHHEEEEECCCCH SKALEYLHSHHLQVDESGAAHPYDLVVTCTDLIVPKIFQQRKMVLVQEGMTEPETLFYHL HHHHHHHHHHCCEECCCCCCCCEEHEEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH ARNVKWIPRWIAGTSTTGLSDAYQKFCVASEGYRQLFIRKGVNPNKIEVTSIPNFDNCAH HHCCHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEEEECCCHHHHHH YLQNDFPYKDYVLVCTSDNRETFIYENRRKNIEKYVAMAAGRQLIFKLHPNENVERATRE HHHCCCCCCCEEEEEECCCCEEEEECHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHH IKQYAPGSLVFSEGKTEEMIANCAMMIAQFSSTIFVGSALGKEVHCGLPTDELKALTPLQ HHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHEEEEHHCCCCEECCCCHHHHHHHCCCC NNSAAKNIADVCREVVEQ CCCHHHHHHHHHHHHHCC >Mature Secondary Structure MRKKILFICGSMNQTTQMHQISEWLGDYDHFFCPFFSDGLLGVATKLGLLEFTIMGKKRS CCCEEEEEECCCCCHHHHHHHHHHHCCCCCEECCHHCCCHHHHHHHHHHHEEEEECCCCH SKALEYLHSHHLQVDESGAAHPYDLVVTCTDLIVPKIFQQRKMVLVQEGMTEPETLFYHL HHHHHHHHHHCCEECCCCCCCCEEHEEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH ARNVKWIPRWIAGTSTTGLSDAYQKFCVASEGYRQLFIRKGVNPNKIEVTSIPNFDNCAH HHCCHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEEEECCCHHHHHH YLQNDFPYKDYVLVCTSDNRETFIYENRRKNIEKYVAMAAGRQLIFKLHPNENVERATRE HHHCCCCCCCEEEEEECCCCEEEEECHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHH IKQYAPGSLVFSEGKTEEMIANCAMMIAQFSSTIFVGSALGKEVHCGLPTDELKALTPLQ HHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHEEEEHHCCCCEECCCCHHHHHHHCCCC NNSAAKNIADVCREVVEQ CCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA