| Definition | Chlorobium chlorochromatii CaD3 chromosome, complete genome. |
|---|---|
| Accession | NC_007514 |
| Length | 2,572,079 |
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The map label for this gene is 78189101
Identifier: 78189101
GI number: 78189101
Start: 1527711
End: 1528775
Strand: Reverse
Name: 78189101
Synonym: Cag_1134
Alternate gene names: NA
Gene position: 1528775-1527711 (Counterclockwise)
Preceding gene: 78189103
Following gene: 78189100
Centisome position: 59.44
GC content: 46.2
Gene sequence:
>1065_bases ATGCCTCAAAAAGCTTCATCCAATCCTGCATGGATTGGCTATGCTGGTCTTGCGCTTGGCTTGCTCCTTATTGGCTTGCT CTTTAGCCAACTTGACCTCCAGCGTTCCTTTGCCTTAATTGCCGATACGGGCTGGTATGCTCTCTTAATTTTACTCCCTT TTGGTGCCTTACATCTGCTTGAAACCTTTGCATGGCAGCACCTCTTTCCGCAAACATCGGGGCGCGTGCCATTTGTGCGC CTTTTGAAAATTCAAATTATTGCAGAAACCGTTTCCATGACCTTTCCCGCTGGCGTTGCCGTGGGCGAGCCATTGCGTCC ATTTCTCTGCCATCGCTTGCTTGGCATTCCTGTGCCATTAGGTGTTGCCTCCATTGCTGTGCGTAAATTGTTACTGAGTG TAGCACAAGGCGTTTACACCCTTGTGGGTTCGCTTTTTGGCTTTGCACTGTTGCAGCAACTATCGCCCACAATTCTTCGC TTTAATGGGCTTGGCTACATAATGGTTACAATGGGCTTGTCGGTGCTTCTGCTTTTTTTATTTGTACTTATCTTACTACT TAATGGCAATGTGGCAGAAAAGGTGCATAGCTTGCTTATGCGCATTCCCTTTGAAAAAGTACGCCAAAAGCTGCTTGCAC ACGAAGCGGGCTTTTTAGCAACCGACAAAGCCTTGCAAGCATTTCGAGGAAACCATCACCCACGATTATGGTTGGTGCTG TTGCTTTACGTAACAGCATGGTGTATGCTTGCGCTCGAAAGCTATCTTATTTTACAAGCACTTGGTATTCAAATTCCCTT TATGCAGGTTTTAACTATTGATGTTGCCCTTACCATGCTACGCACCATCTTCTTTTTTATCCCCTCAGGACTTGGTGTGC AAGATGTGGGTTATCTACTCTTTTTTCAAGCACTTGGCATACCTGAGGCTGTAGTGGTAGGTGGAGCATTTGTTTTGTTT CGTCGCTTAAAAGAGTTGCTTTGGTACGCTCTCGGATATGTTTTGATGTTCTTTTCAGGCATCCATTTAGGCGATGCAGC AAGCTTGCAAGGGGAGGCGGAATGA
Upstream 100 bases:
>100_bases ATCAAGTTTTTCCTCTGCACCTGTAATTGTAACGGCATTTACTCCTATTGCATGGCGTAATTGCTCTCTTCGTAAGTGTT CCTTCGATTTGTAAACTTTC
Downstream 100 bases:
>100_bases GGAAAAAAATTCTCTTTATTTGTGGATCCATGAACCAAACCACCCAAATGCACCAAATTTCGGAGTGGCTTGGCGACTAC GACCACTTTTTTTGCCCCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 354; Mature: 353
Protein sequence:
>354_residues MPQKASSNPAWIGYAGLALGLLLIGLLFSQLDLQRSFALIADTGWYALLILLPFGALHLLETFAWQHLFPQTSGRVPFVR LLKIQIIAETVSMTFPAGVAVGEPLRPFLCHRLLGIPVPLGVASIAVRKLLLSVAQGVYTLVGSLFGFALLQQLSPTILR FNGLGYIMVTMGLSVLLLFLFVLILLLNGNVAEKVHSLLMRIPFEKVRQKLLAHEAGFLATDKALQAFRGNHHPRLWLVL LLYVTAWCMLALESYLILQALGIQIPFMQVLTIDVALTMLRTIFFFIPSGLGVQDVGYLLFFQALGIPEAVVVGGAFVLF RRLKELLWYALGYVLMFFSGIHLGDAASLQGEAE
Sequences:
>Translated_354_residues MPQKASSNPAWIGYAGLALGLLLIGLLFSQLDLQRSFALIADTGWYALLILLPFGALHLLETFAWQHLFPQTSGRVPFVR LLKIQIIAETVSMTFPAGVAVGEPLRPFLCHRLLGIPVPLGVASIAVRKLLLSVAQGVYTLVGSLFGFALLQQLSPTILR FNGLGYIMVTMGLSVLLLFLFVLILLLNGNVAEKVHSLLMRIPFEKVRQKLLAHEAGFLATDKALQAFRGNHHPRLWLVL LLYVTAWCMLALESYLILQALGIQIPFMQVLTIDVALTMLRTIFFFIPSGLGVQDVGYLLFFQALGIPEAVVVGGAFVLF RRLKELLWYALGYVLMFFSGIHLGDAASLQGEAE >Mature_353_residues PQKASSNPAWIGYAGLALGLLLIGLLFSQLDLQRSFALIADTGWYALLILLPFGALHLLETFAWQHLFPQTSGRVPFVRL LKIQIIAETVSMTFPAGVAVGEPLRPFLCHRLLGIPVPLGVASIAVRKLLLSVAQGVYTLVGSLFGFALLQQLSPTILRF NGLGYIMVTMGLSVLLLFLFVLILLLNGNVAEKVHSLLMRIPFEKVRQKLLAHEAGFLATDKALQAFRGNHHPRLWLVLL LYVTAWCMLALESYLILQALGIQIPFMQVLTIDVALTMLRTIFFFIPSGLGVQDVGYLLFFQALGIPEAVVVGGAFVLFR RLKELLWYALGYVLMFFSGIHLGDAASLQGEAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39002; Mature: 38870
Theoretical pI: Translated: 9.52; Mature: 9.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQKASSNPAWIGYAGLALGLLLIGLLFSQLDLQRSFALIADTGWYALLILLPFGALHLL CCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH ETFAWQHLFPQTSGRVPFVRLLKIQIIAETVSMTFPAGVAVGEPLRPFLCHRLLGIPVPL HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCH GVASIAVRKLLLSVAQGVYTLVGSLFGFALLQQLSPTILRFNGLGYIMVTMGLSVLLLFL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEECCCHHHHHHHHHHHHHHHH FVLILLLNGNVAEKVHSLLMRIPFEKVRQKLLAHEAGFLATDKALQAFRGNHHPRLWLVL HHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHH LLYVTAWCMLALESYLILQALGIQIPFMQVLTIDVALTMLRTIFFFIPSGLGVQDVGYLL HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH FFQALGIPEAVVVGGAFVLFRRLKELLWYALGYVLMFFSGIHLGDAASLQGEAE HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure PQKASSNPAWIGYAGLALGLLLIGLLFSQLDLQRSFALIADTGWYALLILLPFGALHLL CCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH ETFAWQHLFPQTSGRVPFVRLLKIQIIAETVSMTFPAGVAVGEPLRPFLCHRLLGIPVPL HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCH GVASIAVRKLLLSVAQGVYTLVGSLFGFALLQQLSPTILRFNGLGYIMVTMGLSVLLLFL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEECCCHHHHHHHHHHHHHHHH FVLILLLNGNVAEKVHSLLMRIPFEKVRQKLLAHEAGFLATDKALQAFRGNHHPRLWLVL HHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHH LLYVTAWCMLALESYLILQALGIQIPFMQVLTIDVALTMLRTIFFFIPSGLGVQDVGYLL HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH FFQALGIPEAVVVGGAFVLFRRLKELLWYALGYVLMFFSGIHLGDAASLQGEAE HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA