Click here to switch to the map view.

The map label for this gene is 78067926

Identifier: 78067926

GI number: 78067926

Start: 3622823

End: 3623662

Strand: Reverse

Name: 78067926

Synonym: Bcep18194_A6457

Alternate gene names: NA

Gene position: 3623662-3622823 (Counterclockwise)

Preceding gene: 78067927

Following gene: 78067925

Centisome position: 98.09

GC content: 65.71

Gene sequence:

>840_bases
ATGGCGAAACAACCGTCGCTCGACGATTTCCGCGTGCCGTACAGCACGCGCGAGAAGGAAGCCGCAGCATTCAAGCTCGA
TGCGTTCGACCCGGCCGCGAAGCCGTTCTCGTCCGGTTCGAAGGACGACGACCGCGAACGGCTGTCGGCCGTGTCGACCG
AGCTCGACGTGCAGCAGGAGCGCCTGCACACACAGCAGAAGAAGCGCGTGCTGCTCGTGCTGCAGGGGATGGACACCAGC
GGCAAGGACGGCACCGTGCGCGCGGTGTTCCGCGAGGTCGATCCGCTCGGCCTGCGCGTCGTGCCGTTCAAGGCGCCCAC
GCCGATCGAGGCCGCGCACGACTTCCTGTGGCGCGTGCATGCGCAGGTGCCGGCCGCGGGCGAGCTCGCGATCTTCAACC
GCAGCCACTATGAAGACGTGCTCGTGCCGCGCGTGCTCGACCTGATCGACGCGAAGGAATGCGAGCGCCGCTACCGGCAG
ATCCGCGATTTCGAGACGATGCTGGTCGAGAACGGCACGACGATCATCAAGTGCTTCCTGCACATCTCGAAGGACGAGCA
GCGCGAGCGGCTGCAGGCGCGCATCGACGATCCGACCAAGCACTGGAAGTTCGACATCTCCGATCTCGACGCACGCAAGC
ACTGGGACGCGTACCAGTCCGCCTACCGCGACGCGCTCGCCGCGACGTCGGCCGAGCATGCGCCGTGGTATGTGATCCCG
GCGAACTCGAAGACGCACCGCAATGTGATGATCGCCGAGCTGCTGCTGCGCACGATGACCGACATGAAGCTGGAATTCCC
GCCGCCGAAGCCCGAGCTCGAAGGCGTGAAGATCCGCTAA

Upstream 100 bases:

>100_bases
AACCGCGCATGACGACGGGCCGCCCCGAACTGTTCGGGGCGGCCCGTTGCGTTTGGTGGATGCGTTATCGTATGCACCAC
AGCGTCCAACGGAGGAACGA

Downstream 100 bases:

>100_bases
GCTGCACCCCTGAAAAAACATCGAACTGAACGGAATCCGACATGATGCGAGTGATTACCGCCAACCTGAACGGCATCCGC
TCCGCCGCGAAGAAGGGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: URF2 [H]

Number of amino acids: Translated: 279; Mature: 278

Protein sequence:

>279_residues
MAKQPSLDDFRVPYSTREKEAAAFKLDAFDPAAKPFSSGSKDDDRERLSAVSTELDVQQERLHTQQKKRVLLVLQGMDTS
GKDGTVRAVFREVDPLGLRVVPFKAPTPIEAAHDFLWRVHAQVPAAGELAIFNRSHYEDVLVPRVLDLIDAKECERRYRQ
IRDFETMLVENGTTIIKCFLHISKDEQRERLQARIDDPTKHWKFDISDLDARKHWDAYQSAYRDALAATSAEHAPWYVIP
ANSKTHRNVMIAELLLRTMTDMKLEFPPPKPELEGVKIR

Sequences:

>Translated_279_residues
MAKQPSLDDFRVPYSTREKEAAAFKLDAFDPAAKPFSSGSKDDDRERLSAVSTELDVQQERLHTQQKKRVLLVLQGMDTS
GKDGTVRAVFREVDPLGLRVVPFKAPTPIEAAHDFLWRVHAQVPAAGELAIFNRSHYEDVLVPRVLDLIDAKECERRYRQ
IRDFETMLVENGTTIIKCFLHISKDEQRERLQARIDDPTKHWKFDISDLDARKHWDAYQSAYRDALAATSAEHAPWYVIP
ANSKTHRNVMIAELLLRTMTDMKLEFPPPKPELEGVKIR
>Mature_278_residues
AKQPSLDDFRVPYSTREKEAAAFKLDAFDPAAKPFSSGSKDDDRERLSAVSTELDVQQERLHTQQKKRVLLVLQGMDTSG
KDGTVRAVFREVDPLGLRVVPFKAPTPIEAAHDFLWRVHAQVPAAGELAIFNRSHYEDVLVPRVLDLIDAKECERRYRQI
RDFETMLVENGTTIIKCFLHISKDEQRERLQARIDDPTKHWKFDISDLDARKHWDAYQSAYRDALAATSAEHAPWYVIPA
NSKTHRNVMIAELLLRTMTDMKLEFPPPKPELEGVKIR

Specific function: Unknown

COG id: COG2326

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011993
- InterPro:   IPR022488 [H]

Pfam domain/function: PF03976 PPK2 [H]

EC number: NA

Molecular weight: Translated: 32048; Mature: 31917

Theoretical pI: Translated: 7.03; Mature: 7.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKQPSLDDFRVPYSTREKEAAAFKLDAFDPAAKPFSSGSKDDDRERLSAVSTELDVQQE
CCCCCCCCCCCCCCCCCCCHHHEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
RLHTQQKKRVLLVLQGMDTSGKDGTVRAVFREVDPLGLRVVPFKAPTPIEAAHDFLWRVH
HHHHHHHCEEEEEEECCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHH
AQVPAAGELAIFNRSHYEDVLVPRVLDLIDAKECERRYRQIRDFETMLVENGTTIIKCFL
HCCCCCCCEEEECCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCEEEEHHH
HISKDEQRERLQARIDDPTKHWKFDISDLDARKHWDAYQSAYRDALAATSAEHAPWYVIP
HCCCHHHHHHHHHHCCCCHHHEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE
ANSKTHRNVMIAELLLRTMTDMKLEFPPPKPELEGVKIR
CCCCCHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCC
>Mature Secondary Structure 
AKQPSLDDFRVPYSTREKEAAAFKLDAFDPAAKPFSSGSKDDDRERLSAVSTELDVQQE
CCCCCCCCCCCCCCCCCCHHHEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
RLHTQQKKRVLLVLQGMDTSGKDGTVRAVFREVDPLGLRVVPFKAPTPIEAAHDFLWRVH
HHHHHHHCEEEEEEECCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHH
AQVPAAGELAIFNRSHYEDVLVPRVLDLIDAKECERRYRQIRDFETMLVENGTTIIKCFL
HCCCCCCCEEEECCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCEEEEHHH
HISKDEQRERLQARIDDPTKHWKFDISDLDARKHWDAYQSAYRDALAATSAEHAPWYVIP
HCCCHHHHHHHHHHCCCCHHHEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE
ANSKTHRNVMIAELLLRTMTDMKLEFPPPKPELEGVKIR
CCCCCHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8199775 [H]