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The map label for this gene is ybgK [H]

Identifier: 78067854

GI number: 78067854

Start: 3552115

End: 3553182

Strand: Direct

Name: ybgK [H]

Synonym: Bcep18194_A6385

Alternate gene names: 78067854

Gene position: 3552115-3553182 (Clockwise)

Preceding gene: 78067853

Following gene: 78067855

Centisome position: 96.16

GC content: 72.94

Gene sequence:

>1068_bases
ATGACCCAGAGCAACGTACCGGCCACCATCGAGGTGGTGCGGGCCGGCCCGCTGACCACCGTGCAGGATCTCGGGCGCCG
CGGCACGCGCCATCTCGGCGTCGCGCAGGGTGGCGCGCTCGACGGCCTCGCGCTCGAAGTCGGCAACCGGCTGGTCGGCA
ACCGCCCCGATGCGGCGGCCGTCGAGATCACGATCGGCCCGGCCGCTTTCCGCTTCCCGCGCGCGACCCGCATCGCGATC
ACCGGCACCGAGTTCGGTGCAACGCTCGACGGCCAGCGCGTATATTCATGGTGGAGCCTGCCGGTCGAGGCCGGGCAAAC
GCTCGTGCTGCCCGCCGCGAAACGCGGGATGCGCGGCTACCTGTGCATCGCCGGCGGCATCGACGTGCTGCCGATGCTCG
GCTCGCGCAGCACCGATCTCGCATCGCGCTTCGGGGGCCTCGGCGGCCGCGCGCTGCGCGACGGCGATCGCCTCCCGGTC
GGCGTGCTTCCGGCCGGGATGGGTTGCCTCGCGGCCGACGCGCCCGAATTCGGTGTCAAGGCGCCCGCGTGGTGCGCATT
CGTGCGCGTCGACGAGCCGCCGCGCCGTCACCGCCCCGCGCACGCGCCGTGGGCGATGCCCGTGCGCGTGCTGCCGGGCC
CCGACTACGCGTCGTTCGCCGCCGATTCGCAGCAAGCGTTCTGGGATGAAGAATGGCTGGTCACGGCAAACAGCAACCGC
ATGGGCTACCGGCTCGCCGGCGTCGAGCTCGCGCGCGAGCGGCCGGCCGAACTGCTGTCGCACGCGGTGCTGCCCGGCAC
GATCCAGGTGCCGCCGAACGGCCAGCCGATCGTGCTGATGCACGACGCGCAGACCACCGGCGGCTACCCGAAGATCGGCA
CGGTGATCCGCGCGGATCTGTGGAAACTCGCGCAGGCGCGGCTCAACCTGCCGATCCGCTTCGTGCGCACGACGCCCGAT
GCCGCGCGCGCCGCGCTGGCCGCGGAACGTGCGTATCTGCGGCAGATCGACGTGGCGATCGACATGCGCGAGGAAGCGCG
CCGCCGCGCCCAGTCGCGTGCGGCATGA

Upstream 100 bases:

>100_bases
GCCGCACGTCGCACGTGCTGTTCGATCCGGCGCGGCCGCAGCCGACGCTGCTGCTGCCCGGCGACCGCGTGCGCTTCACC
ATTGCGGGAGTCGACGCACG

Downstream 100 bases:

>100_bases
CAATAGCGGTAGCAGTACCGAAGGCAGTAGCAGTAGAGAAGACGGGCCACGCAATCAGTGGACGAGGAACATCATGCAAA
TCGATCTGAATGCCGATCTC

Product: allophanate hydrolase subunit 2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 355; Mature: 354

Protein sequence:

>355_residues
MTQSNVPATIEVVRAGPLTTVQDLGRRGTRHLGVAQGGALDGLALEVGNRLVGNRPDAAAVEITIGPAAFRFPRATRIAI
TGTEFGATLDGQRVYSWWSLPVEAGQTLVLPAAKRGMRGYLCIAGGIDVLPMLGSRSTDLASRFGGLGGRALRDGDRLPV
GVLPAGMGCLAADAPEFGVKAPAWCAFVRVDEPPRRHRPAHAPWAMPVRVLPGPDYASFAADSQQAFWDEEWLVTANSNR
MGYRLAGVELARERPAELLSHAVLPGTIQVPPNGQPIVLMHDAQTTGGYPKIGTVIRADLWKLAQARLNLPIRFVRTTPD
AARAALAAERAYLRQIDVAIDMREEARRRAQSRAA

Sequences:

>Translated_355_residues
MTQSNVPATIEVVRAGPLTTVQDLGRRGTRHLGVAQGGALDGLALEVGNRLVGNRPDAAAVEITIGPAAFRFPRATRIAI
TGTEFGATLDGQRVYSWWSLPVEAGQTLVLPAAKRGMRGYLCIAGGIDVLPMLGSRSTDLASRFGGLGGRALRDGDRLPV
GVLPAGMGCLAADAPEFGVKAPAWCAFVRVDEPPRRHRPAHAPWAMPVRVLPGPDYASFAADSQQAFWDEEWLVTANSNR
MGYRLAGVELARERPAELLSHAVLPGTIQVPPNGQPIVLMHDAQTTGGYPKIGTVIRADLWKLAQARLNLPIRFVRTTPD
AARAALAAERAYLRQIDVAIDMREEARRRAQSRAA
>Mature_354_residues
TQSNVPATIEVVRAGPLTTVQDLGRRGTRHLGVAQGGALDGLALEVGNRLVGNRPDAAAVEITIGPAAFRFPRATRIAIT
GTEFGATLDGQRVYSWWSLPVEAGQTLVLPAAKRGMRGYLCIAGGIDVLPMLGSRSTDLASRFGGLGGRALRDGDRLPVG
VLPAGMGCLAADAPEFGVKAPAWCAFVRVDEPPRRHRPAHAPWAMPVRVLPGPDYASFAADSQQAFWDEEWLVTANSNRM
GYRLAGVELARERPAELLSHAVLPGTIQVPPNGQPIVLMHDAQTTGGYPKIGTVIRADLWKLAQARLNLPIRFVRTTPDA
ARAALAAERAYLRQIDVAIDMREEARRRAQSRAA

Specific function: Unknown

COG id: COG1984

COG function: function code E; Allophanate hydrolase subunit 2

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis ycsJ and yeast urea amidolyase (DUR1,2) [H]

Homologues:

Organism=Escherichia coli, GI1786930, Length=327, Percent_Identity=45.8715596330275, Blast_Score=265, Evalue=3e-72,
Organism=Saccharomyces cerevisiae, GI6319685, Length=345, Percent_Identity=30.1449275362319, Blast_Score=133, Evalue=4e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003778 [H]

Pfam domain/function: PF02626 AHS2 [H]

EC number: NA

Molecular weight: Translated: 38092; Mature: 37961

Theoretical pI: Translated: 10.33; Mature: 10.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQSNVPATIEVVRAGPLTTVQDLGRRGTRHLGVAQGGALDGLALEVGNRLVGNRPDAAA
CCCCCCCCEEEEEECCCCHHHHHHHCCCCCEECCCCCCCCCCHHHHHCCHHCCCCCCCEE
VEITIGPAAFRFPRATRIAITGTEFGATLDGQRVYSWWSLPVEAGQTLVLPAAKRGMRGY
EEEEECCHHHCCCCCEEEEEECCCCCCCCCCCEEEEEECCHHHCCCEEEEECCCCCCCEE
LCIAGGIDVLPMLGSRSTDLASRFGGLGGRALRDGDRLPVGVLPAGMGCLAADAPEFGVK
EEEECCCEEEECCCCCCHHHHHHHCCCCCCEECCCCCCCEEECCCCCCEEECCCCCCCCC
APAWCAFVRVDEPPRRHRPAHAPWAMPVRVLPGPDYASFAADSQQAFWDEEWLVTANSNR
CCCEEEEEEECCCHHHCCCCCCCCCCEEEEECCCCHHHHCCCCCHHCCCCCEEEEECCCC
MGYRLAGVELARERPAELLSHAVLPGTIQVPPNGQPIVLMHDAQTTGGYPKIGTVIRADL
CEEEEECHHHHHCCHHHHHHHHCCCCEEEECCCCCEEEEEECCCCCCCCCCHHHHHHHHH
WKLAQARLNLPIRFVRTTPDAARAALAAERAYLRQIDVAIDMREEARRRAQSRAA
HHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHEEECHHHHHHHHHHCCC
>Mature Secondary Structure 
TQSNVPATIEVVRAGPLTTVQDLGRRGTRHLGVAQGGALDGLALEVGNRLVGNRPDAAA
CCCCCCCEEEEEECCCCHHHHHHHCCCCCEECCCCCCCCCCHHHHHCCHHCCCCCCCEE
VEITIGPAAFRFPRATRIAITGTEFGATLDGQRVYSWWSLPVEAGQTLVLPAAKRGMRGY
EEEEECCHHHCCCCCEEEEEECCCCCCCCCCCEEEEEECCHHHCCCEEEEECCCCCCCEE
LCIAGGIDVLPMLGSRSTDLASRFGGLGGRALRDGDRLPVGVLPAGMGCLAADAPEFGVK
EEEECCCEEEECCCCCCHHHHHHHCCCCCCEECCCCCCCEEECCCCCCEEECCCCCCCCC
APAWCAFVRVDEPPRRHRPAHAPWAMPVRVLPGPDYASFAADSQQAFWDEEWLVTANSNR
CCCEEEEEEECCCHHHCCCCCCCCCCEEEEECCCCHHHHCCCCCHHCCCCCEEEEECCCC
MGYRLAGVELARERPAELLSHAVLPGTIQVPPNGQPIVLMHDAQTTGGYPKIGTVIRADL
CEEEEECHHHHHCCHHHHHHHHCCCCEEEECCCCCEEEEEECCCCCCCCCCHHHHHHHHH
WKLAQARLNLPIRFVRTTPDAARAALAAERAYLRQIDVAIDMREEARRRAQSRAA
HHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHEEECHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]