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The map label for this gene is ybgL [C]

Identifier: 78067855

GI number: 78067855

Start: 3553256

End: 3554020

Strand: Direct

Name: ybgL [C]

Synonym: Bcep18194_A6386

Alternate gene names: 78067855

Gene position: 3553256-3554020 (Clockwise)

Preceding gene: 78067854

Following gene: 78067866

Centisome position: 96.19

GC content: 68.5

Gene sequence:

>765_bases
ATGCAAATCGATCTGAATGCCGATCTCGGCGAAGGATGCGGTTCGGACGAGGCGCTGCTCGACCTCGTGACGTCCGCGAA
CATCGCATGCGGGTGGCATGCGGGCGGTGCGAACGCGATGCGCGACTGCGTGCGCTGGGCCGTGCAAAAAGGCGTGGCGA
TCGGCGCGCACCCGAGCTTTCACGATCCGGAGAATTTCGGCCGCAAGGAAATGCAGCTGCCGGCCAGCGACATCTACGCG
GGCGTGCTGTACCAGCTCGGCGCGCTGTCTGCGATCGCACAGGCCGAAGGCGGGCGCATCGCGCACGTGAAACCGCACGG
TGCGTTGTACAACCAGGCCGCGCGCGACCCGATGATCGCCGATGCGGTGGTGTCCGCGATCCGCGATTTCGATCCGTCGC
TCGCGGTGTTCGGGCTCGCGAACAGCGTGTTCGTCGCGGCCGCGCGGCACGCGGGGCTCGCCGCGGTGGAGGAAGTGTTC
GCCGATCGCGGCTACCGCGCCGATGGCTCGCTCGTGCCGCGCAACCAGCCCGGCGCACTGATCGACGACGAGGACACGAT
GATCGCGCGCACGCTGGACATGGTGCGCAGCCGGCAGGTGCGTGCGATCGGCGGCGAATGGGTGATGCTCAATGCGCAGA
CCGTCTGCCTGCACGGTGACGGGCCGCATGCGCTGGTATTCGCGAAACGGATTCGCGCCGCGCTCGAGGCGGTGGGCGTC
GACGTGGTTGCGCCCGGCATGCTGCAGGCCGACGAACGCGCCTGA

Upstream 100 bases:

>100_bases
CGCCGCGCCCAGTCGCGTGCGGCATGACAATAGCGGTAGCAGTACCGAAGGCAGTAGCAGTAGAGAAGACGGGCCACGCA
ATCAGTGGACGAGGAACATC

Downstream 100 bases:

>100_bases
TTCGCCGGTCGCGCCAGCGGATCCACATTCGGTCGTACAAAAGAAAAAAGCGCCCTCGTGGCGCTTTTCCGTTGGCGCAA
TCGCTGCGGCTTTGCCGTCT

Product: LamB/YcsF family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MQIDLNADLGEGCGSDEALLDLVTSANIACGWHAGGANAMRDCVRWAVQKGVAIGAHPSFHDPENFGRKEMQLPASDIYA
GVLYQLGALSAIAQAEGGRIAHVKPHGALYNQAARDPMIADAVVSAIRDFDPSLAVFGLANSVFVAAARHAGLAAVEEVF
ADRGYRADGSLVPRNQPGALIDDEDTMIARTLDMVRSRQVRAIGGEWVMLNAQTVCLHGDGPHALVFAKRIRAALEAVGV
DVVAPGMLQADERA

Sequences:

>Translated_254_residues
MQIDLNADLGEGCGSDEALLDLVTSANIACGWHAGGANAMRDCVRWAVQKGVAIGAHPSFHDPENFGRKEMQLPASDIYA
GVLYQLGALSAIAQAEGGRIAHVKPHGALYNQAARDPMIADAVVSAIRDFDPSLAVFGLANSVFVAAARHAGLAAVEEVF
ADRGYRADGSLVPRNQPGALIDDEDTMIARTLDMVRSRQVRAIGGEWVMLNAQTVCLHGDGPHALVFAKRIRAALEAVGV
DVVAPGMLQADERA
>Mature_254_residues
MQIDLNADLGEGCGSDEALLDLVTSANIACGWHAGGANAMRDCVRWAVQKGVAIGAHPSFHDPENFGRKEMQLPASDIYA
GVLYQLGALSAIAQAEGGRIAHVKPHGALYNQAARDPMIADAVVSAIRDFDPSLAVFGLANSVFVAAARHAGLAAVEEVF
ADRGYRADGSLVPRNQPGALIDDEDTMIARTLDMVRSRQVRAIGGEWVMLNAQTVCLHGDGPHALVFAKRIRAALEAVGV
DVVAPGMLQADERA

Specific function: Unknown

COG id: COG1540

COG function: function code R; Uncharacterized proteins, homologs of lactam utilization protein B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0271 (lamB) family [H]

Homologues:

Organism=Escherichia coli, GI1786931, Length=244, Percent_Identity=60.2459016393443, Blast_Score=305, Evalue=2e-84,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR005501 [H]

Pfam domain/function: PF03746 LamB_YcsF [H]

EC number: NA

Molecular weight: Translated: 26789; Mature: 26789

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQIDLNADLGEGCGSDEALLDLVTSANIACGWHAGGANAMRDCVRWAVQKGVAIGAHPSF
CEEECCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCEECCCCCC
HDPENFGRKEMQLPASDIYAGVLYQLGALSAIAQAEGGRIAHVKPHGALYNQAARDPMIA
CCHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHCCCHHH
DAVVSAIRDFDPSLAVFGLANSVFVAAARHAGLAAVEEVFADRGYRADGSLVPRNQPGAL
HHHHHHHHHCCCCEEEHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCE
IDDEDTMIARTLDMVRSRQVRAIGGEWVMLNAQTVCLHGDGPHALVFAKRIRAALEAVGV
ECCCHHHHHHHHHHHHHCHHEEECCCEEEEECEEEEEECCCCHHHHHHHHHHHHHHHHCC
DVVAPGMLQADERA
HHCCCCCCCCCCCC
>Mature Secondary Structure
MQIDLNADLGEGCGSDEALLDLVTSANIACGWHAGGANAMRDCVRWAVQKGVAIGAHPSF
CEEECCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCEECCCCCC
HDPENFGRKEMQLPASDIYAGVLYQLGALSAIAQAEGGRIAHVKPHGALYNQAARDPMIA
CCHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHCCCHHH
DAVVSAIRDFDPSLAVFGLANSVFVAAARHAGLAAVEEVFADRGYRADGSLVPRNQPGAL
HHHHHHHHHCCCCEEEHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCE
IDDEDTMIARTLDMVRSRQVRAIGGEWVMLNAQTVCLHGDGPHALVFAKRIRAALEAVGV
ECCCHHHHHHHHHHHHHCHHEEECCCEEEEECEEEEEECCCCHHHHHHHHHHHHHHHHCC
DVVAPGMLQADERA
HHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA