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The map label for this gene is ybgJ [H]

Identifier: 78067853

GI number: 78067853

Start: 3551462

End: 3552118

Strand: Direct

Name: ybgJ [H]

Synonym: Bcep18194_A6384

Alternate gene names: 78067853

Gene position: 3551462-3552118 (Clockwise)

Preceding gene: 78067851

Following gene: 78067854

Centisome position: 96.14

GC content: 74.12

Gene sequence:

>657_bases
ATGACGCAACCCCGCATTTATCCGCTCGGCGATGCCGCCCTCGTCTGCGAGGTGCCGCCGCCCGCCACGCTCGATTGCCA
GCGCCGCGTCTGGGCCGTTGCCGAGGCCGCGCGCGCGTGGCCCGACGTGATCGACGTCGTGCCCGGCATGAACAACCTGA
CGATCGTGTTCGACGCGCTCGCCACGACGGCCGAGTCGCTCACGCCGGCGCTGCGCGACGCGTGGGAGACGGCCGACGTC
GAGCACGCGGACGGCCGCGAGGTCGAGATCCCGGTCGAATACGGTGGCGCCGCCGGCCCCGACCTGCCGGCCGTCGCCGC
GCATACCGGCCTGTCGGCCGACGAGGTCGTCGCGCGCCACGCGGCCGGCGCCTACGTCGTGTTCTTCGTCGGCTTCCAGC
CGGGTTTCGCGTATCTCGGCGGGCTCGACACCGCACTGCACACGCCGCGCCGCGCGGCGCCGCGCCTCGAGGTGCCGGCC
GGCTCGGTCGGCATCGGCGGGGCGCAGACGGGCATCTATCCGGCCACGTCGCCCGGCGGCTGGCAACTGATCGGCCGCAC
GTCGCACGTGCTGTTCGATCCGGCGCGGCCGCAGCCGACGCTGCTGCTGCCCGGCGACCGCGTGCGCTTCACCATTGCGG
GAGTCGACGCACGATGA

Upstream 100 bases:

>100_bases
AAGCCTCGACATACGGGCTAGGCGAAAACGCTTATTGGGAAGTTGTCGATATTTTATTGACAATGTGCGCTAACATTGCC
GTCCGAACCGTGCCAGTCCG

Downstream 100 bases:

>100_bases
CCCAGAGCAACGTACCGGCCACCATCGAGGTGGTGCGGGCCGGCCCGCTGACCACCGTGCAGGATCTCGGGCGCCGCGGC
ACGCGCCATCTCGGCGTCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 217

Protein sequence:

>218_residues
MTQPRIYPLGDAALVCEVPPPATLDCQRRVWAVAEAARAWPDVIDVVPGMNNLTIVFDALATTAESLTPALRDAWETADV
EHADGREVEIPVEYGGAAGPDLPAVAAHTGLSADEVVARHAAGAYVVFFVGFQPGFAYLGGLDTALHTPRRAAPRLEVPA
GSVGIGGAQTGIYPATSPGGWQLIGRTSHVLFDPARPQPTLLLPGDRVRFTIAGVDAR

Sequences:

>Translated_218_residues
MTQPRIYPLGDAALVCEVPPPATLDCQRRVWAVAEAARAWPDVIDVVPGMNNLTIVFDALATTAESLTPALRDAWETADV
EHADGREVEIPVEYGGAAGPDLPAVAAHTGLSADEVVARHAAGAYVVFFVGFQPGFAYLGGLDTALHTPRRAAPRLEVPA
GSVGIGGAQTGIYPATSPGGWQLIGRTSHVLFDPARPQPTLLLPGDRVRFTIAGVDAR
>Mature_217_residues
TQPRIYPLGDAALVCEVPPPATLDCQRRVWAVAEAARAWPDVIDVVPGMNNLTIVFDALATTAESLTPALRDAWETADVE
HADGREVEIPVEYGGAAGPDLPAVAAHTGLSADEVVARHAAGAYVVFFVGFQPGFAYLGGLDTALHTPRRAAPRLEVPAG
SVGIGGAQTGIYPATSPGGWQLIGRTSHVLFDPARPQPTLLLPGDRVRFTIAGVDAR

Specific function: Unknown

COG id: COG2049

COG function: function code E; Allophanate hydrolase subunit 1

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis ycsJ and yeast urea amidolyase (DUR1,2) [H]

Homologues:

Organism=Escherichia coli, GI1786929, Length=211, Percent_Identity=54.0284360189574, Blast_Score=232, Evalue=1e-62,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003833
- InterPro:   IPR020899
- InterPro:   IPR010016
- InterPro:   IPR002130 [H]

Pfam domain/function: PF02682 AHS1 [H]

EC number: NA

Molecular weight: Translated: 22863; Mature: 22732

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQPRIYPLGDAALVCEVPPPATLDCQRRVWAVAEAARAWPDVIDVVPGMNNLTIVFDAL
CCCCCEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCHHHHHHCCCCCCEEEEEEHH
ATTAESLTPALRDAWETADVEHADGREVEIPVEYGGAAGPDLPAVAAHTGLSADEVVARH
HHHHHHHCHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHCCCCHHHHHHHH
AAGAYVVFFVGFQPGFAYLGGLDTALHTPRRAAPRLEVPAGSVGIGGAQTGIYPATSPGG
CCCEEEEEEEECCCCHHHHCCCHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCC
WQLIGRTSHVLFDPARPQPTLLLPGDRVRFTIAGVDAR
EEEEECCCEEEECCCCCCCEEEECCCCEEEEEEECCCC
>Mature Secondary Structure 
TQPRIYPLGDAALVCEVPPPATLDCQRRVWAVAEAARAWPDVIDVVPGMNNLTIVFDAL
CCCCEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCHHHHHHCCCCCCEEEEEEHH
ATTAESLTPALRDAWETADVEHADGREVEIPVEYGGAAGPDLPAVAAHTGLSADEVVARH
HHHHHHHCHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHCCCCHHHHHHHH
AAGAYVVFFVGFQPGFAYLGGLDTALHTPRRAAPRLEVPAGSVGIGGAQTGIYPATSPGG
CCCEEEEEEEECCCCHHHHCCCHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCC
WQLIGRTSHVLFDPARPQPTLLLPGDRVRFTIAGVDAR
EEEEECCCEEEECCCCCCCEEEECCCCEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]