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The map label for this gene is ygfA [C]

Identifier: 78067851

GI number: 78067851

Start: 3550118

End: 3550726

Strand: Direct

Name: ygfA [C]

Synonym: Bcep18194_A6382

Alternate gene names: 78067851

Gene position: 3550118-3550726 (Clockwise)

Preceding gene: 78067846

Following gene: 78067853

Centisome position: 96.1

GC content: 70.28

Gene sequence:

>609_bases
ATGGAGCACGAAGTGAGCGAAAGCATAGCACGCAACCCTGTGCCAAACCCGAAGGTTGCGCTACGCAAAACGCTGTCCGG
CGCGCGCCGCGACGCCGCGTCGCAACCCGCCGCGAACGCCGCGCTCGACGCACGGCTGCGCACGCTGCTCGAACGGCTCG
CGCCGCGCACGGTCGGGTTCTACTGGCCGCTGCCGGGCGAATTCGATGCACGCGAGGCAGTGCTCGCGTGGTGTGCGGCC
GGTGCCGGCCGGCAGGCCGCGCTGCCCGTGATCGACGAGCGGCACACGCCGCTCGAGTTCCATGCGTGGGACGCGCACAC
GCCGATGCGCGAAGGTCATCACCGGATTCCGGAACCGGCGTCGGGAATCGTCGTCGTGCCCGACCTGTTATTGATTCCCT
GTGTGGGATTCGACCTGGAGCGCTACCGGCTCGGCTACGGCGGCGGCTACTACGACCGCACGCTGGCCGCATGGCCGGGC
ACCGAGCTGCCCGTGACGGTCGGCATCGCCTACGATGCGTGCCGCGTCGACGCACTGCCGGCCGAAGCGCACGATCTCGC
GCTGCGCTGGATCGTGACCGACGCCGCGCTGTACCCGGCCGCCGGATGA

Upstream 100 bases:

>100_bases
GGTGCGGCGCACGCAGCCGTGCCCGCGACGAGCGCGGTGGCCGAAAGCGTCAGCGCGACCGCGCGATATACTCGGAAAAG
GCTGTTCGACATCGTTTTGA

Downstream 100 bases:

>100_bases
TGCGGCGGGCGGCGCCGCATCCGTCGTCGCACGCCCGTCAGCGCCCCGCCTCGCGCCACCTGCGGCGCAACCGTTTACAG
CGATGCCGCCGCGCGCGCAG

Product: 5-formyltetrahydrofolate cyclo-ligase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MEHEVSESIARNPVPNPKVALRKTLSGARRDAASQPAANAALDARLRTLLERLAPRTVGFYWPLPGEFDAREAVLAWCAA
GAGRQAALPVIDERHTPLEFHAWDAHTPMREGHHRIPEPASGIVVVPDLLLIPCVGFDLERYRLGYGGGYYDRTLAAWPG
TELPVTVGIAYDACRVDALPAEAHDLALRWIVTDAALYPAAG

Sequences:

>Translated_202_residues
MEHEVSESIARNPVPNPKVALRKTLSGARRDAASQPAANAALDARLRTLLERLAPRTVGFYWPLPGEFDAREAVLAWCAA
GAGRQAALPVIDERHTPLEFHAWDAHTPMREGHHRIPEPASGIVVVPDLLLIPCVGFDLERYRLGYGGGYYDRTLAAWPG
TELPVTVGIAYDACRVDALPAEAHDLALRWIVTDAALYPAAG
>Mature_202_residues
MEHEVSESIARNPVPNPKVALRKTLSGARRDAASQPAANAALDARLRTLLERLAPRTVGFYWPLPGEFDAREAVLAWCAA
GAGRQAALPVIDERHTPLEFHAWDAHTPMREGHHRIPEPASGIVVVPDLLLIPCVGFDLERYRLGYGGGYYDRTLAAWPG
TELPVTVGIAYDACRVDALPAEAHDLALRWIVTDAALYPAAG

Specific function: Unknown

COG id: COG0212

COG function: function code H; 5-formyltetrahydrofolate cyclo-ligase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 5-formyltetrahydrofolate cyclo-ligase family [H]

Homologues:

Organism=Escherichia coli, GI1789278, Length=184, Percent_Identity=29.8913043478261, Blast_Score=60, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002698 [H]

Pfam domain/function: PF01812 5-FTHF_cyc-lig [H]

EC number: NA

Molecular weight: Translated: 21973; Mature: 21973

Theoretical pI: Translated: 6.15; Mature: 6.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEHEVSESIARNPVPNPKVALRKTLSGARRDAASQPAANAALDARLRTLLERLAPRTVGF
CCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEE
YWPLPGEFDAREAVLAWCAAGAGRQAALPVIDERHTPLEFHAWDAHTPMREGHHRIPEPA
ECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHCCCCCCCCC
SGIVVVPDLLLIPCVGFDLERYRLGYGGGYYDRTLAAWPGTELPVTVGIAYDACRVDALP
CCEEECCHHHHHHCCCCCHHHEEECCCCCCCCCEEECCCCCCCCEEEEEEECCCCCCCCC
AEAHDLALRWIVTDAALYPAAG
CCHHHHEEHEEEHHHHHCCCCC
>Mature Secondary Structure
MEHEVSESIARNPVPNPKVALRKTLSGARRDAASQPAANAALDARLRTLLERLAPRTVGF
CCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEE
YWPLPGEFDAREAVLAWCAAGAGRQAALPVIDERHTPLEFHAWDAHTPMREGHHRIPEPA
ECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHCCCCCCCCC
SGIVVVPDLLLIPCVGFDLERYRLGYGGGYYDRTLAAWPGTELPVTVGIAYDACRVDALP
CCEEECCHHHHHHCCCCCHHHEEECCCCCCCCCEEECCCCCCCCEEEEEEECCCCCCCCC
AEAHDLALRWIVTDAALYPAAG
CCHHHHEEHEEEHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]