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The map label for this gene is flgC

Identifier: 78067839

GI number: 78067839

Start: 3536864

End: 3537289

Strand: Reverse

Name: flgC

Synonym: Bcep18194_A6370

Alternate gene names: 78067839

Gene position: 3537289-3536864 (Counterclockwise)

Preceding gene: 78067840

Following gene: 78067838

Centisome position: 95.75

GC content: 65.96

Gene sequence:

>426_bases
ATGCCCTCGTTGATGAACATCTTCGGCGTCGCCGGCTCGGCGCTGTCCGCGCAGTCGCAGCGCCTGAACGTCACCGCGTC
GAACCTCGCGAACGCCGATAGCGCAACCGGCCCGGACGGCAAGCCGTACAAGGCCAAGCAGGTCGTGTTCGCGACCGACC
CGATCGGCGGCGCACGCACCGCGTCCGGCCAGGGCGTGGGCGGCGTGCGCGTGACGAAGGTGATGGATGACCCGTCGCCG
ATGAAGTCGACCTACGACCCGTCGAACCCGGCTGCCGATTCGAACGGCTACGTGCAGATGCCGAACGTCGATCCGGTGCA
GGAGATGGTGAACATGATCTCGGCGTCGCGCTCGTACCAGGCCAACGTCGAGACGCTGAACACCGCGAAGACGCTGATGC
TCAAGACGCTGACGATCGGCTCGTAA

Upstream 100 bases:

>100_bases
ATGACCGTGATGACCCAGCAGATCAAGGCGATGATCGCCGCGATCACGTCGAACCAGTGACGGCGCGTACCGCCGCCGAA
TCCGAGCAAAAGGAGCTTCC

Downstream 100 bases:

>100_bases
GCCGCGCGTCGACCGACCTTACAGACTCGACAGTTCCGACAGTCCCGACAGAAGGCCACCCAGGATGACTTCCTCCAACA
CGACGATCGGCAGCAACGGC

Product: flagellar basal body rod protein FlgC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 140

Protein sequence:

>141_residues
MPSLMNIFGVAGSALSAQSQRLNVTASNLANADSATGPDGKPYKAKQVVFATDPIGGARTASGQGVGGVRVTKVMDDPSP
MKSTYDPSNPAADSNGYVQMPNVDPVQEMVNMISASRSYQANVETLNTAKTLMLKTLTIGS

Sequences:

>Translated_141_residues
MPSLMNIFGVAGSALSAQSQRLNVTASNLANADSATGPDGKPYKAKQVVFATDPIGGARTASGQGVGGVRVTKVMDDPSP
MKSTYDPSNPAADSNGYVQMPNVDPVQEMVNMISASRSYQANVETLNTAKTLMLKTLTIGS
>Mature_140_residues
PSLMNIFGVAGSALSAQSQRLNVTASNLANADSATGPDGKPYKAKQVVFATDPIGGARTASGQGVGGVRVTKVMDDPSPM
KSTYDPSNPAADSNGYVQMPNVDPVQEMVNMISASRSYQANVETLNTAKTLMLKTLTIGS

Specific function: Unknown

COG id: COG1558

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787314, Length=138, Percent_Identity=65.2173913043478, Blast_Score=179, Evalue=9e-47,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR006299 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 14612; Mature: 14480

Theoretical pI: Translated: 8.90; Mature: 8.90

Prosite motif: PS00588 FLAGELLA_BB_ROD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSLMNIFGVAGSALSAQSQRLNVTASNLANADSATGPDGKPYKAKQVVFATDPIGGART
CCCHHHHHHCCCCCCCCCCCEEEEEHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCC
ASGQGVGGVRVTKVMDDPSPMKSTYDPSNPAADSNGYVQMPNVDPVQEMVNMISASRSYQ
CCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHCCCCCC
ANVETLNTAKTLMLKTLTIGS
CCCHHHHHHHHHHHHEEECCC
>Mature Secondary Structure 
PSLMNIFGVAGSALSAQSQRLNVTASNLANADSATGPDGKPYKAKQVVFATDPIGGART
CCHHHHHHCCCCCCCCCCCEEEEEHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCC
ASGQGVGGVRVTKVMDDPSPMKSTYDPSNPAADSNGYVQMPNVDPVQEMVNMISASRSYQ
CCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHCCCCCC
ANVETLNTAKTLMLKTLTIGS
CCCHHHHHHHHHHHHEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA