Click here to switch to the map view.

The map label for this gene is flgB

Identifier: 78067840

GI number: 78067840

Start: 3537330

End: 3537818

Strand: Reverse

Name: flgB

Synonym: Bcep18194_A6371

Alternate gene names: 78067840

Gene position: 3537818-3537330 (Counterclockwise)

Preceding gene: 78067845

Following gene: 78067839

Centisome position: 95.77

GC content: 68.3

Gene sequence:

>489_bases
ATGCTGGACAAACTCGATGCGGAATTCGCGTTCGGCCGACAGGCGCTGGACGTACGCGCCTACCGGCAGGAACTGCTGTC
GTCGAACATCGCGAACTCCGACACGCCCGGCTACCAGGCCCGCGACGTCGATTTCGCGTCGACGCTCGCGCGCTCGCTGA
AGCAGACGGGCGGCGGCCTCGCGCCGAGCAACGCGGCGCAACTGCCGATGGCGCAGCCGGCCGGCGTGACGAGCGGGATG
TCGATGGTGTCGACGGCGGCGGGCCACATGGCCGGCACCGCGAAGCTGATCCCGACGGGCGGCCCGTCGGACGACTACGG
CCGTGCGCAATACCGGATGCCGCTGCAGCCGGCGCTCGACGGCAACACGGTCGATCTCGACGTCGAGCGCGTGCAGTTCG
CGAACAACGCGCTGCACTACCAGACCGGGATGACCGTGATGACCCAGCAGATCAAGGCGATGATCGCCGCGATCACGTCG
AACCAGTGA

Upstream 100 bases:

>100_bases
GGTTGCGTCCGACGCCTACCATCGCTGTCATGGAAAAAAGCCTCTCGAGTCGCCATCCGGCGCGAGGGGCGTGCAGCGCT
TCATACGGAGAGACGCACAC

Downstream 100 bases:

>100_bases
CGGCGCGTACCGCCGCCGAATCCGAGCAAAAGGAGCTTCCATGCCCTCGTTGATGAACATCTTCGGCGTCGCCGGCTCGG
CGCTGTCCGCGCAGTCGCAG

Product: flagellar basal body rod protein FlgB

Products: NA

Alternate protein names: Putative proximal rod protein [H]

Number of amino acids: Translated: 162; Mature: 162

Protein sequence:

>162_residues
MLDKLDAEFAFGRQALDVRAYRQELLSSNIANSDTPGYQARDVDFASTLARSLKQTGGGLAPSNAAQLPMAQPAGVTSGM
SMVSTAAGHMAGTAKLIPTGGPSDDYGRAQYRMPLQPALDGNTVDLDVERVQFANNALHYQTGMTVMTQQIKAMIAAITS
NQ

Sequences:

>Translated_162_residues
MLDKLDAEFAFGRQALDVRAYRQELLSSNIANSDTPGYQARDVDFASTLARSLKQTGGGLAPSNAAQLPMAQPAGVTSGM
SMVSTAAGHMAGTAKLIPTGGPSDDYGRAQYRMPLQPALDGNTVDLDVERVQFANNALHYQTGMTVMTQQIKAMIAAITS
NQ
>Mature_162_residues
MLDKLDAEFAFGRQALDVRAYRQELLSSNIANSDTPGYQARDVDFASTLARSLKQTGGGLAPSNAAQLPMAQPAGVTSGM
SMVSTAAGHMAGTAKLIPTGGPSDDYGRAQYRMPLQPALDGNTVDLDVERVQFANNALHYQTGMTVMTQQIKAMIAAITS
NQ

Specific function: Unknown

COG id: COG1815

COG function: function code N; Flagellar basal body protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787313, Length=160, Percent_Identity=43.125, Blast_Score=129, Evalue=1e-31,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR006300 [H]

Pfam domain/function: PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 17154; Mature: 17154

Theoretical pI: Translated: 5.68; Mature: 5.68

Prosite motif: PS00588 FLAGELLA_BB_ROD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDKLDAEFAFGRQALDVRAYRQELLSSNIANSDTPGYQARDVDFASTLARSLKQTGGGL
CCCCCCCHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC
APSNAAQLPMAQPAGVTSGMSMVSTAAGHMAGTAKLIPTGGPSDDYGRAQYRMPLQPALD
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCEECCCCCCCCC
GNTVDLDVERVQFANNALHYQTGMTVMTQQIKAMIAAITSNQ
CCEEEEHHHHHHHHCCCEEHHHCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLDKLDAEFAFGRQALDVRAYRQELLSSNIANSDTPGYQARDVDFASTLARSLKQTGGGL
CCCCCCCHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC
APSNAAQLPMAQPAGVTSGMSMVSTAAGHMAGTAKLIPTGGPSDDYGRAQYRMPLQPALD
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCEECCCCCCCCC
GNTVDLDVERVQFANNALHYQTGMTVMTQQIKAMIAAITSNQ
CCEEEEHHHHHHHHCCCEEHHHCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]