| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is aceK
Identifier: 78067738
GI number: 78067738
Start: 3430719
End: 3432578
Strand: Direct
Name: aceK
Synonym: Bcep18194_A6269
Alternate gene names: 78067738
Gene position: 3430719-3432578 (Clockwise)
Preceding gene: 78067736
Following gene: 78067739
Centisome position: 92.87
GC content: 63.23
Gene sequence:
>1860_bases ATGGCGAGTGCTTACAGCCCCTCCCGAACGAGCCTGCACGCGATGAATCACTTCCCCAAACTGCTGTCTTCGCAGATCGG TTTCGACGTCGCGCAGACGATGCTCGAAAACTTCGACCGCCACTACCGGATCTTCCGCGAGGCGGCCGTCGAGGCGAAGA CGCTGTACGAGCATGGCGACTGGCACGGGCTGCAGCGGCTCGCGCGCGAGCGGATCACGTCGTACGACGATCGCGTGAAG GAATGCGTCGAGGTGCTGGAAGACGAATACGACGCGGAAAACATCGACGACGAAGTGTGGCAGCAGATCAAGCTGCACTA CATCGGCCTGCTCACGTCGCACCGCCAGCCCGAGTGCGCGGAGACCTTCTTCAATTCGGTGTGCTGCAAGATCCTGCACC GCTCGTACTTCAGCAACGATTTCATCTTCGTGCGCCCGGCGATCTCGACCGAGTATCTGGAGAACGACGAGCCGGCCGCG AAGCCGACCTACCGCGCGTACTATCCGGGCACCGACGGGCTCGCGACCACGCTCGAGCGGATCGTCACCAACTTCCAGCT CGAGCCGGCGTTCGACGATCTCCCGCGCGACATCGGGTGCGTGATGCAGGCGATCCACGACGAATTCGGCCACTTCGACG AAGCACCGAATTTCCAGATCCACGTGCTGTCGTCGCTGTTCTTCCGCAACAAGAGCGCGTACATCGTCGGCCGCATCATC AACGCCGACCGCGTGCTGCCGTTCGCGGTGCCGATCCGCCACGTGCGTCCGGGCGTGCTGTCGCTCGACACCGTGCTGCT GCGCCGCGACCAGCTGATGATCATCTTCGGCTTCTCGCACTCGTATTTCCTCGTCGACATGGGCGTGCCGTCCGCGTACG TCGACTTCCTGTGCACGATCATGCCCGGCAAGCCGAAGGCGGAGATCTACACGTCGGTCGGCCTGCAAAAGCAGGGCAAG AACCTGTTCTATCGCGATCTGCTGCACCACCTGTCGCATTCGAGCGACCGCTTCATCATCGCGCCCGGGATCAAGGGCCT CGTGATGCTCGTGTTCACGCTGCCGTCGTTCCCGTACGTGTTCAAGATCATCAAGGATCACTTCCCGCCGCCGAAGGAAA CGACGCGCGCGCAGATCATGGAGAAGTACCAGCTCGTGAAGCGCCACGACCGCCTCGGGCGGATGGCCGACACGCTCGAA TATTCGAGCGTCGCGCTGCCGATCGCGCGGCTCGACCACGCGCTCGTGCGCGAGCTGGAAAAGGAAGTGCCGTCGCTGCT CGAATACGAGGACGGCAATCTCGTGATCGAGCACCTGTACATCGAGCGCCGGATGACGCCGCTCAACCTGTACCTGCAGA ACGGCTCCGACAGCGACGTCGAGCACGGCGTGAAGGAGTACGGCAACGCGGTGAAGGAGCTGATGAAGGCGAACATCTTC CCCGGCGACATGCTGTACAAGAACTTCGGCGTGACGCGCCACGGCCGCGTGGTGTTCTACGACTACGACGAAATCGAGTA CCTGACCGACTGCAACGTGCGCCGCGTGCCGCCGCCGCGCAACGAGGAAGACGAGCTGTCCGGCGAACCGTGGTATACCG TCGGCCCGCACGACATCTTTCCGGAGACCTACGGGCCATTCCTGCTCGGCGACCCGCGCGTGCGCGACGTATTCATGAAG CATCACGCGGACTTTTTCGATCCCGCGCTGTGGCAAGCCAGCAAGGACAAGCTGATCCAGGGCGAATTGCCCGACTTTTA CCCGTACGACACCGCGCTGCGCTTCTGCACGCGCTACCCCGCGCGCTTCGGCGCGACGGACCAGAACGATGGCGCAGGCG ACGCGCAGCGCGCCGCCTGA
Upstream 100 bases:
>100_bases CGAAGATGCACCGAACGGCCCCCAACGGCGGATAACCCGCCGCTTGCCGGCCGGCCGCGCATCGCCGCGAAGCCCTTGAA CCGCCCGCTTGGGCGCTAAA
Downstream 100 bases:
>100_bases CGCCCGCTACACCGCACCGATTGCGACCTGATTTCCGCCAACGGAATCCACACCGATGAACACCCAAGACCATCCGCTTT CACACCTGTTCGACAACAAC
Product: bifunctional isocitrate dehydrogenase kinase/phosphatase protein
Products: NA
Alternate protein names: IDH kinase/phosphatase; IDHK/P [H]
Number of amino acids: Translated: 619; Mature: 618
Protein sequence:
>619_residues MASAYSPSRTSLHAMNHFPKLLSSQIGFDVAQTMLENFDRHYRIFREAAVEAKTLYEHGDWHGLQRLARERITSYDDRVK ECVEVLEDEYDAENIDDEVWQQIKLHYIGLLTSHRQPECAETFFNSVCCKILHRSYFSNDFIFVRPAISTEYLENDEPAA KPTYRAYYPGTDGLATTLERIVTNFQLEPAFDDLPRDIGCVMQAIHDEFGHFDEAPNFQIHVLSSLFFRNKSAYIVGRII NADRVLPFAVPIRHVRPGVLSLDTVLLRRDQLMIIFGFSHSYFLVDMGVPSAYVDFLCTIMPGKPKAEIYTSVGLQKQGK NLFYRDLLHHLSHSSDRFIIAPGIKGLVMLVFTLPSFPYVFKIIKDHFPPPKETTRAQIMEKYQLVKRHDRLGRMADTLE YSSVALPIARLDHALVRELEKEVPSLLEYEDGNLVIEHLYIERRMTPLNLYLQNGSDSDVEHGVKEYGNAVKELMKANIF PGDMLYKNFGVTRHGRVVFYDYDEIEYLTDCNVRRVPPPRNEEDELSGEPWYTVGPHDIFPETYGPFLLGDPRVRDVFMK HHADFFDPALWQASKDKLIQGELPDFYPYDTALRFCTRYPARFGATDQNDGAGDAQRAA
Sequences:
>Translated_619_residues MASAYSPSRTSLHAMNHFPKLLSSQIGFDVAQTMLENFDRHYRIFREAAVEAKTLYEHGDWHGLQRLARERITSYDDRVK ECVEVLEDEYDAENIDDEVWQQIKLHYIGLLTSHRQPECAETFFNSVCCKILHRSYFSNDFIFVRPAISTEYLENDEPAA KPTYRAYYPGTDGLATTLERIVTNFQLEPAFDDLPRDIGCVMQAIHDEFGHFDEAPNFQIHVLSSLFFRNKSAYIVGRII NADRVLPFAVPIRHVRPGVLSLDTVLLRRDQLMIIFGFSHSYFLVDMGVPSAYVDFLCTIMPGKPKAEIYTSVGLQKQGK NLFYRDLLHHLSHSSDRFIIAPGIKGLVMLVFTLPSFPYVFKIIKDHFPPPKETTRAQIMEKYQLVKRHDRLGRMADTLE YSSVALPIARLDHALVRELEKEVPSLLEYEDGNLVIEHLYIERRMTPLNLYLQNGSDSDVEHGVKEYGNAVKELMKANIF PGDMLYKNFGVTRHGRVVFYDYDEIEYLTDCNVRRVPPPRNEEDELSGEPWYTVGPHDIFPETYGPFLLGDPRVRDVFMK HHADFFDPALWQASKDKLIQGELPDFYPYDTALRFCTRYPARFGATDQNDGAGDAQRAA >Mature_618_residues ASAYSPSRTSLHAMNHFPKLLSSQIGFDVAQTMLENFDRHYRIFREAAVEAKTLYEHGDWHGLQRLARERITSYDDRVKE CVEVLEDEYDAENIDDEVWQQIKLHYIGLLTSHRQPECAETFFNSVCCKILHRSYFSNDFIFVRPAISTEYLENDEPAAK PTYRAYYPGTDGLATTLERIVTNFQLEPAFDDLPRDIGCVMQAIHDEFGHFDEAPNFQIHVLSSLFFRNKSAYIVGRIIN ADRVLPFAVPIRHVRPGVLSLDTVLLRRDQLMIIFGFSHSYFLVDMGVPSAYVDFLCTIMPGKPKAEIYTSVGLQKQGKN LFYRDLLHHLSHSSDRFIIAPGIKGLVMLVFTLPSFPYVFKIIKDHFPPPKETTRAQIMEKYQLVKRHDRLGRMADTLEY SSVALPIARLDHALVRELEKEVPSLLEYEDGNLVIEHLYIERRMTPLNLYLQNGSDSDVEHGVKEYGNAVKELMKANIFP GDMLYKNFGVTRHGRVVFYDYDEIEYLTDCNVRRVPPPRNEEDELSGEPWYTVGPHDIFPETYGPFLLGDPRVRDVFMKH HADFFDPALWQASKDKLIQGELPDFYPYDTALRFCTRYPARFGATDQNDGAGDAQRAA
Specific function: Bifunctional enzyme which can phosphorylate or dephosphorylate isocitrate dehydrogenase (IDH) on a specific serine residue. This is a regulatory mechanism which enables bacteria to bypass the Krebs cycle via the glyoxylate shunt in response to the source
COG id: COG4579
COG function: function code T; Isocitrate dehydrogenase kinase/phosphatase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AceK family [H]
Homologues:
Organism=Escherichia coli, GI1790446, Length=570, Percent_Identity=41.0526315789474, Blast_Score=453, Evalue=1e-128,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010452 - ProDom: PD043552 [H]
Pfam domain/function: PF06315 AceK [H]
EC number: =2.7.11.5 [H]
Molecular weight: Translated: 71387; Mature: 71256
Theoretical pI: Translated: 5.82; Mature: 5.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASAYSPSRTSLHAMNHFPKLLSSQIGFDVAQTMLENFDRHYRIFREAAVEAKTLYEHGD CCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC WHGLQRLARERITSYDDRVKECVEVLEDEYDAENIDDEVWQQIKLHYIGLLTSHRQPECA HHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHH ETFFNSVCCKILHRSYFSNDFIFVRPAISTEYLENDEPAAKPTYRAYYPGTDGLATTLER HHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHCCCCCCCCCCCEEECCCCCHHHHHHHH IVTNFQLEPAFDDLPRDIGCVMQAIHDEFGHFDEAPNFQIHVLSSLFFRNKSAYIVGRII HHHCCCCCCCHHHCCHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHCCCCCEEEEEEE NADRVLPFAVPIRHVRPGVLSLDTVLLRRDQLMIIFGFSHSYFLVDMGVPSAYVDFLCTI CCCCCCCHHHHHHHCCCCHHHHHHHHHCCCCEEEEEECCCCEEEEECCCCHHHHHHHHHH MPGKPKAEIYTSVGLQKQGKNLFYRDLLHHLSHSSDRFIIAPGIKGLVMLVFTLPSFPYV CCCCCCHHHHHHCCCHHCCCCHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHCCHHHH FKIIKDHFPPPKETTRAQIMEKYQLVKRHDRLGRMADTLEYSSVALPIARLDHALVRELE HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KEVPSLLEYEDGNLVIEHLYIERRMTPLNLYLQNGSDSDVEHGVKEYGNAVKELMKANIF HHHHHHHEECCCCEEEEEEHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCC PGDMLYKNFGVTRHGRVVFYDYDEIEYLTDCNVRRVPPPRNEEDELSGEPWYTVGPHDIF CCHHHHHHCCCCCCCEEEEEECCCHHHHHCCCCCCCCCCCCCCCCCCCCCCEECCCHHCC PETYGPFLLGDPRVRDVFMKHHADFFDPALWQASKDKLIQGELPDFYPYDTALRFCTRYP CCCCCCCEECCHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCC ARFGATDQNDGAGDAQRAA HHCCCCCCCCCCCCHHCCC >Mature Secondary Structure ASAYSPSRTSLHAMNHFPKLLSSQIGFDVAQTMLENFDRHYRIFREAAVEAKTLYEHGD CCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC WHGLQRLARERITSYDDRVKECVEVLEDEYDAENIDDEVWQQIKLHYIGLLTSHRQPECA HHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHH ETFFNSVCCKILHRSYFSNDFIFVRPAISTEYLENDEPAAKPTYRAYYPGTDGLATTLER HHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHCCCCCCCCCCCEEECCCCCHHHHHHHH IVTNFQLEPAFDDLPRDIGCVMQAIHDEFGHFDEAPNFQIHVLSSLFFRNKSAYIVGRII HHHCCCCCCCHHHCCHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHCCCCCEEEEEEE NADRVLPFAVPIRHVRPGVLSLDTVLLRRDQLMIIFGFSHSYFLVDMGVPSAYVDFLCTI CCCCCCCHHHHHHHCCCCHHHHHHHHHCCCCEEEEEECCCCEEEEECCCCHHHHHHHHHH MPGKPKAEIYTSVGLQKQGKNLFYRDLLHHLSHSSDRFIIAPGIKGLVMLVFTLPSFPYV CCCCCCHHHHHHCCCHHCCCCHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHCCHHHH FKIIKDHFPPPKETTRAQIMEKYQLVKRHDRLGRMADTLEYSSVALPIARLDHALVRELE HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KEVPSLLEYEDGNLVIEHLYIERRMTPLNLYLQNGSDSDVEHGVKEYGNAVKELMKANIF HHHHHHHEECCCCEEEEEEHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCC PGDMLYKNFGVTRHGRVVFYDYDEIEYLTDCNVRRVPPPRNEEDELSGEPWYTVGPHDIF CCHHHHHHCCCCCCCEEEEEECCCHHHHHCCCCCCCCCCCCCCCCCCCCCCEECCCHHCC PETYGPFLLGDPRVRDVFMKHHADFFDPALWQASKDKLIQGELPDFYPYDTALRFCTRYP CCCCCCCEECCHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCC ARFGATDQNDGAGDAQRAA HHCCCCCCCCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA