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The map label for this gene is ydiF [H]

Identifier: 78067736

GI number: 78067736

Start: 3427715

End: 3429361

Strand: Direct

Name: ydiF [H]

Synonym: Bcep18194_A6267

Alternate gene names: 78067736

Gene position: 3427715-3429361 (Clockwise)

Preceding gene: 78067735

Following gene: 78067738

Centisome position: 92.79

GC content: 70.13

Gene sequence:

>1647_bases
ATGGCTGCTGCCACGCCCACCGGCGCGCTCGTCGCGCTTCATCACGTTTCCTTCCGCTTCGACGACGGCTTCACGCTGTT
CGATTCGCTCGACCTTTCCATCGACCGCACGCCGACCGGCATCGTCGGCCGCAACGGCATCGGCAAGAGCCAGCTCGCGC
AATTGATCGCGGGCCGCTGCGCGCCGAGCGCGGGGACGATCGACCGGCATACGTCGATCGTCTACGTCGCGCAGCAGCAC
GACGACGGCGACGCGTCGGCCGGCCCGCGAACCGTCGCGCAGATTGCCGCGCTCGATGTGCCGCTCGGCGCGCTCGCGCG
TCTCGCCGACGGCCGCGCGGAACCGCACGACTTCGACCTGATCGGCGATCGCTGGGATCTCGTGGAACGGTTGCGCATCG
CGCTCGACGCAGCCGGCCTGCACGACGTGCAACCCGACACGCCCGCGCAGGCCCTGAGCGGCGGGCAGCTCGCGCGCGTC
GCGCTGATCGGCGCGCTGCTGTCCGGCGCGGGCCTGCTCGTGCTCGACGAACCGACCAACCATCTCGACGCGACTGGCCG
CGCGTGGCTGCGCGCGGCGCTCGACGGCTGGCGCGGCGGCCTCATCATCGTGAGCCATGACCGTGCGCTGCTCGCCGACG
TGCAGCGCATCGTCGAGCTGACACCGCAAGGCGTGCGCTCGTACGGCGGCAACTACGCGCTCTACCGCGCGCAGCGCGAC
GCGGAACAGGATGCCGCGCAGTCTGCGCTCGACAACGCGCGTGCCGAACGCGGACGCGTCAGGCGCAGGCTCGAACAGGA
ACACGACACGATCCAGCGACACGCGGCCGCGTCGCTGCGCGAGGCGAAAACGGCCAACTTGTCATCGATGGCAAAACAGA
GCCGCAAGGGCGCGGCGCGCAGCATCATGGGCACGGTGCGGCGCCACCAGAATGAATTCAAGGCGACGCTCGACGAACGC
GTGCAGGAAGCGGCCGCGCGCGTCGAAGCCGATGCGCCGGTGCTCGTGTCGCTGCCGGGTACCGAAGTCAGCGCACGTCG
CCAGTTGTTCACGCTCGAAGGTGCGCAACTGCCGTGGCACATCGCAGGCAATGCCGATGCGATCACGTGGTCGGCGAGCG
GCGCCGTGCGCATCGCGCTGACCGGCCCGAACGGCTGCGGCAAATCGACGTTGCTGCGGATGCTCGCGGGCGAGCTTGCG
CCGCGTTCAGGCGCATGCACGACCCACGTGAGCGCCGCGTATCTCGACCAGCGGCTCGCGCTGCTCGATCCCGATCGTTC
GATCGTCGAGCAACTGGGGCTGCTCGATACGCCGCTCGCCGAAGGCGACCTGCGCAGCCGGCTCGCGCTATTGCAGCTCG
ACGCGGTGCGCGCGACGCAGCCGGCACGGCAGTTGAGCGGCGGCGAACGGTTGAAGGCCGCGCTCGCGTGCGCGTTGTGG
CGCGGCACGCCCGCGCAACTGCTGCTGCTCGACGAGCCGACCAATCACCTCGATCTCGAATCGGTGCGTGCGATCGAAGG
TGCACTGACCGGCTTCCCCGGCGCGATCGTGGTCGCGTCGCACGACACCGCGTTTCTCGCGGCGCTCGACCCGACGCACA
CGATGCAATGGCATCGCGACGGGTGGCGCTACGAACCCGTCGCGTGA

Upstream 100 bases:

>100_bases
GACGCCAGCCAAAGTGAACAACTAAGCCTTCCCGAAATGTTTTCGCCGCCGTGCCACGCACGCCGCGCGCGAAGGTCTTC
ACGCATTTTTGGAGGTGCTT

Downstream 100 bases:

>100_bases
GGAAAACGAAGCGGTGTCAGCCGGCGGTACGGAACCGCAGCACGCCGTCGTCGCCCTGCTCGCGCACGAGTTCGCCCGCG
AGCCACAGCAGGTTCAGGTG

Product: ABC transporter, fused ATPase subunits

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 548; Mature: 547

Protein sequence:

>548_residues
MAAATPTGALVALHHVSFRFDDGFTLFDSLDLSIDRTPTGIVGRNGIGKSQLAQLIAGRCAPSAGTIDRHTSIVYVAQQH
DDGDASAGPRTVAQIAALDVPLGALARLADGRAEPHDFDLIGDRWDLVERLRIALDAAGLHDVQPDTPAQALSGGQLARV
ALIGALLSGAGLLVLDEPTNHLDATGRAWLRAALDGWRGGLIIVSHDRALLADVQRIVELTPQGVRSYGGNYALYRAQRD
AEQDAAQSALDNARAERGRVRRRLEQEHDTIQRHAAASLREAKTANLSSMAKQSRKGAARSIMGTVRRHQNEFKATLDER
VQEAAARVEADAPVLVSLPGTEVSARRQLFTLEGAQLPWHIAGNADAITWSASGAVRIALTGPNGCGKSTLLRMLAGELA
PRSGACTTHVSAAYLDQRLALLDPDRSIVEQLGLLDTPLAEGDLRSRLALLQLDAVRATQPARQLSGGERLKAALACALW
RGTPAQLLLLDEPTNHLDLESVRAIEGALTGFPGAIVVASHDTAFLAALDPTHTMQWHRDGWRYEPVA

Sequences:

>Translated_548_residues
MAAATPTGALVALHHVSFRFDDGFTLFDSLDLSIDRTPTGIVGRNGIGKSQLAQLIAGRCAPSAGTIDRHTSIVYVAQQH
DDGDASAGPRTVAQIAALDVPLGALARLADGRAEPHDFDLIGDRWDLVERLRIALDAAGLHDVQPDTPAQALSGGQLARV
ALIGALLSGAGLLVLDEPTNHLDATGRAWLRAALDGWRGGLIIVSHDRALLADVQRIVELTPQGVRSYGGNYALYRAQRD
AEQDAAQSALDNARAERGRVRRRLEQEHDTIQRHAAASLREAKTANLSSMAKQSRKGAARSIMGTVRRHQNEFKATLDER
VQEAAARVEADAPVLVSLPGTEVSARRQLFTLEGAQLPWHIAGNADAITWSASGAVRIALTGPNGCGKSTLLRMLAGELA
PRSGACTTHVSAAYLDQRLALLDPDRSIVEQLGLLDTPLAEGDLRSRLALLQLDAVRATQPARQLSGGERLKAALACALW
RGTPAQLLLLDEPTNHLDLESVRAIEGALTGFPGAIVVASHDTAFLAALDPTHTMQWHRDGWRYEPVA
>Mature_547_residues
AAATPTGALVALHHVSFRFDDGFTLFDSLDLSIDRTPTGIVGRNGIGKSQLAQLIAGRCAPSAGTIDRHTSIVYVAQQHD
DGDASAGPRTVAQIAALDVPLGALARLADGRAEPHDFDLIGDRWDLVERLRIALDAAGLHDVQPDTPAQALSGGQLARVA
LIGALLSGAGLLVLDEPTNHLDATGRAWLRAALDGWRGGLIIVSHDRALLADVQRIVELTPQGVRSYGGNYALYRAQRDA
EQDAAQSALDNARAERGRVRRRLEQEHDTIQRHAAASLREAKTANLSSMAKQSRKGAARSIMGTVRRHQNEFKATLDERV
QEAAARVEADAPVLVSLPGTEVSARRQLFTLEGAQLPWHIAGNADAITWSASGAVRIALTGPNGCGKSTLLRMLAGELAP
RSGACTTHVSAAYLDQRLALLDPDRSIVEQLGLLDTPLAEGDLRSRLALLQLDAVRATQPARQLSGGERLKAALACALWR
GTPAQLLLLDEPTNHLDLESVRAIEGALTGFPGAIVVASHDTAFLAALDPTHTMQWHRDGWRYEPVA

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=508, Percent_Identity=27.5590551181102, Blast_Score=144, Evalue=2e-34,
Organism=Homo sapiens, GI27881506, Length=537, Percent_Identity=28.1191806331471, Blast_Score=138, Evalue=1e-32,
Organism=Homo sapiens, GI10947137, Length=537, Percent_Identity=28.1191806331471, Blast_Score=138, Evalue=1e-32,
Organism=Homo sapiens, GI10947135, Length=556, Percent_Identity=28.4172661870504, Blast_Score=132, Evalue=7e-31,
Organism=Homo sapiens, GI69354671, Length=545, Percent_Identity=28.6238532110092, Blast_Score=132, Evalue=8e-31,
Organism=Escherichia coli, GI1789751, Length=510, Percent_Identity=31.3725490196078, Blast_Score=177, Evalue=1e-45,
Organism=Escherichia coli, GI1787182, Length=567, Percent_Identity=29.1005291005291, Blast_Score=174, Evalue=1e-44,
Organism=Escherichia coli, GI2367384, Length=530, Percent_Identity=31.1320754716981, Blast_Score=159, Evalue=3e-40,
Organism=Escherichia coli, GI1787041, Length=528, Percent_Identity=25, Blast_Score=124, Evalue=1e-29,
Organism=Caenorhabditis elegans, GI17559834, Length=528, Percent_Identity=27.6515151515151, Blast_Score=153, Evalue=3e-37,
Organism=Caenorhabditis elegans, GI17555318, Length=507, Percent_Identity=28.4023668639053, Blast_Score=152, Evalue=3e-37,
Organism=Caenorhabditis elegans, GI17553372, Length=514, Percent_Identity=27.431906614786, Blast_Score=120, Evalue=1e-27,
Organism=Saccharomyces cerevisiae, GI6320874, Length=544, Percent_Identity=28.4926470588235, Blast_Score=130, Evalue=5e-31,
Organism=Saccharomyces cerevisiae, GI6321121, Length=526, Percent_Identity=26.0456273764259, Blast_Score=119, Evalue=1e-27,
Organism=Saccharomyces cerevisiae, GI6323278, Length=155, Percent_Identity=34.1935483870968, Blast_Score=70, Evalue=6e-13,
Organism=Saccharomyces cerevisiae, GI6324314, Length=158, Percent_Identity=34.1772151898734, Blast_Score=70, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6325030, Length=205, Percent_Identity=29.7560975609756, Blast_Score=67, Evalue=8e-12,
Organism=Drosophila melanogaster, GI24642252, Length=542, Percent_Identity=29.1512915129151, Blast_Score=163, Evalue=4e-40,
Organism=Drosophila melanogaster, GI18859989, Length=542, Percent_Identity=29.1512915129151, Blast_Score=163, Evalue=4e-40,
Organism=Drosophila melanogaster, GI24641342, Length=508, Percent_Identity=28.1496062992126, Blast_Score=144, Evalue=2e-34,
Organism=Drosophila melanogaster, GI24666836, Length=508, Percent_Identity=27.3622047244095, Blast_Score=142, Evalue=4e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 58534; Mature: 58403

Theoretical pI: Translated: 6.66; Mature: 6.66

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAATPTGALVALHHVSFRFDDGFTLFDSLDLSIDRTPTGIVGRNGIGKSQLAQLIAGRC
CCCCCCCCCEEEEEEEEEEECCCCEEEECCCCEECCCCCCCCCCCCCCHHHHHHHHHHCC
APSAGTIDRHTSIVYVAQQHDDGDASAGPRTVAQIAALDVPLGALARLADGRAEPHDFDL
CCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCC
IGDRWDLVERLRIALDAAGLHDVQPDTPAQALSGGQLARVALIGALLSGAGLLVLDEPTN
CCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHCCCEEEECCCCC
HLDATGRAWLRAALDGWRGGLIIVSHDRALLADVQRIVELTPQGVRSYGGNYALYRAQRD
CCCCCHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHCCHHHHHCCCCEEEEECHHH
AEQDAAQSALDNARAERGRVRRRLEQEHDTIQRHAAASLREAKTANLSSMAKQSRKGAAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
SIMGTVRRHQNEFKATLDERVQEAAARVEADAPVLVSLPGTEVSARRQLFTLEGAQLPWH
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHEEEEECCCCCCEE
IAGNADAITWSASGAVRIALTGPNGCGKSTLLRMLAGELAPRSGACTTHVSAAYLDQRLA
ECCCCCEEEEECCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
LLDPDRSIVEQLGLLDTPLAEGDLRSRLALLQLDAVRATQPARQLSGGERLKAALACALW
HCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHH
RGTPAQLLLLDEPTNHLDLESVRAIEGALTGFPGAIVVASHDTAFLAALDPTHTMQWHRD
CCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCEEEEECCCCCCHHCCCC
GWRYEPVA
CCEECCCC
>Mature Secondary Structure 
AAATPTGALVALHHVSFRFDDGFTLFDSLDLSIDRTPTGIVGRNGIGKSQLAQLIAGRC
CCCCCCCCEEEEEEEEEEECCCCEEEECCCCEECCCCCCCCCCCCCCHHHHHHHHHHCC
APSAGTIDRHTSIVYVAQQHDDGDASAGPRTVAQIAALDVPLGALARLADGRAEPHDFDL
CCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCC
IGDRWDLVERLRIALDAAGLHDVQPDTPAQALSGGQLARVALIGALLSGAGLLVLDEPTN
CCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHCCCEEEECCCCC
HLDATGRAWLRAALDGWRGGLIIVSHDRALLADVQRIVELTPQGVRSYGGNYALYRAQRD
CCCCCHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHCCHHHHHCCCCEEEEECHHH
AEQDAAQSALDNARAERGRVRRRLEQEHDTIQRHAAASLREAKTANLSSMAKQSRKGAAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
SIMGTVRRHQNEFKATLDERVQEAAARVEADAPVLVSLPGTEVSARRQLFTLEGAQLPWH
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHEEEEECCCCCCEE
IAGNADAITWSASGAVRIALTGPNGCGKSTLLRMLAGELAPRSGACTTHVSAAYLDQRLA
ECCCCCEEEEECCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
LLDPDRSIVEQLGLLDTPLAEGDLRSRLALLQLDAVRATQPARQLSGGERLKAALACALW
HCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHH
RGTPAQLLLLDEPTNHLDLESVRAIEGALTGFPGAIVVASHDTAFLAALDPTHTMQWHRD
CCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCEEEEECCCCCCHHCCCC
GWRYEPVA
CCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]