Click here to switch to the map view.

The map label for this gene is ctpA [H]

Identifier: 78067656

GI number: 78067656

Start: 3333529

End: 3335076

Strand: Direct

Name: ctpA [H]

Synonym: Bcep18194_A6187

Alternate gene names: 78067656

Gene position: 3333529-3335076 (Clockwise)

Preceding gene: 78067655

Following gene: 78067657

Centisome position: 90.24

GC content: 65.05

Gene sequence:

>1548_bases
ATGCGAATGAAATTGAAGAACATCGGCCTGATTGCCGCGGGCCTCGCCACGGGCGTGTTCGCCACGCTGCAGGTTTCCGC
ATCGGCCGAGCAGACCGCCACGGCGCCGCTTCCCCTCGACCAGCTCCGCCTGTTCGCGGAAGTCTTCGGACAGATCAAGC
GCGAGTACGTCGAACCGGTCGACGACAAGAAGCTGCTGACGGCTGCGATCAAGGGCATGGTGTCGAGCCTCGACCCGCAC
TCGTCGTTCCTCGACAAGACCGACTATGACGAGCTGCAGGAGCAGACGAAGGGCCGCTTCGCGGGTCTCGGCATCGAGAT
CTCGCAGGAAGACGGCCTCGTCAAGGTGATCTCGCCGATCGAGGATACCCCCGCGTTCCGCGCCGGCATCCGTCCGGGCG
ACCTGATCACGCGCATCAACGACAAGCCGGTGCGCGGCATGACGCTCGACAAGGCCGTGAAGCAGATGCGCGGCGAGCCG
GGCACCAAGGTCACGCTGACGATCTTCCGCAAGAGCGACGACCGCACGTTCCCGGTCACCGTCACGCGCGCGATCATCAA
GGTCCAGAGCGTGAAGATGAAGATCCTCGATCCGGGCTACGCGTATGTCCGCATCACGAGCTTCCAGGAGCGCACGACGC
CCGATCTCGCCCAGAAGCTGCAGGACATCGCACGCCAGCAGCCGAACCTGAAGGGCCTCGTCCTCGACCTGCGCAACAAC
GGCGGCGGCCTGCTGCAGAGCGCGGTCGGCGTGGCCGGCGCATTCCTGCCGCCCGACTCCGTCGTCGTGTCGACCAACGG
CCAGATCGCCGATTCGAAGCAGGTCTACCGCGATACGTATGACAACTATCGCCTGCCGTCCTTCGACGGCGATCCGCTGA
AGAACCTGCCGCCGGTCTTCAAGACCGTGCCGATGATCGTGCTGACGAACGCCTATTCGGCGTCCGCGTCGGAAATCGTC
GCCGGTGCGCTGCAGGATTCGAAGCGCGCGCAGATCATGGGCAAGACGACGTTCGGCAAGGGTTCGGTGCAGACGGTCCG
CCCGATGACGGCCGACACCGCGCTGCGCCTGACCACCGCGTACTACTACACGCCGAGCGGCCGTTCGATCCAGAACAAGG
GCATCACGCCGGACGTGCCGGTCGATCAGTACGCGGACGGCGATCCGGACGACGTGCTCGTGACGCGCGAGGTCGACTAC
TCGAACCACCTGGCGAACACGCAGGATCCGAACGAGAAGAAGGAACAGGAAGACCGCGAGCAGCGCCGCATGGATCAGCT
GCGCATTCTCGAAGAGCAGAACGACAAGAAGACGCCGGAGCAGCGCCAGAAGGATCGCGATCGCAAGCCGATCGAGTTCG
GCAGCGCCGACGACTTCATGATGCAGCAGGCGCTCAACAAGCTCGAAGGCAAGCCGGTCCAGGAATCGAAGTCGCTGCTC
GCCGAGAGCACGACGAAGAGCCCGGCCGGCAAGGCCACGGCCTCGAAGGCATCGGGCGCAAGCGCGAAGCCGGCAGCCGC
ACCGAAGCCCGCGTCAGCGCCGCAGTAA

Upstream 100 bases:

>100_bases
CTTTTCGCGCCGTTCCACTGAGTTATCGGACGAACAGTTATACTTGTCCGCTACATCATCCCCGCTACCGCCACGCGCTT
CCCGACCGCACCAGATCTCT

Downstream 100 bases:

>100_bases
GCGCCGGCCGGCATCCGACGGGCCATCGCGGGAAGACCGCGATGGCCCGTTTTTCATGCGCGCCTAAAATAACGACACCT
CCGCCGCCTCGCCCACGACT

Product: peptidase S41A

Products: NA

Alternate protein names: C-terminal-processing protease [H]

Number of amino acids: Translated: 515; Mature: 515

Protein sequence:

>515_residues
MRMKLKNIGLIAAGLATGVFATLQVSASAEQTATAPLPLDQLRLFAEVFGQIKREYVEPVDDKKLLTAAIKGMVSSLDPH
SSFLDKTDYDELQEQTKGRFAGLGIEISQEDGLVKVISPIEDTPAFRAGIRPGDLITRINDKPVRGMTLDKAVKQMRGEP
GTKVTLTIFRKSDDRTFPVTVTRAIIKVQSVKMKILDPGYAYVRITSFQERTTPDLAQKLQDIARQQPNLKGLVLDLRNN
GGGLLQSAVGVAGAFLPPDSVVVSTNGQIADSKQVYRDTYDNYRLPSFDGDPLKNLPPVFKTVPMIVLTNAYSASASEIV
AGALQDSKRAQIMGKTTFGKGSVQTVRPMTADTALRLTTAYYYTPSGRSIQNKGITPDVPVDQYADGDPDDVLVTREVDY
SNHLANTQDPNEKKEQEDREQRRMDQLRILEEQNDKKTPEQRQKDRDRKPIEFGSADDFMMQQALNKLEGKPVQESKSLL
AESTTKSPAGKATASKASGASAKPAAAPKPASAPQ

Sequences:

>Translated_515_residues
MRMKLKNIGLIAAGLATGVFATLQVSASAEQTATAPLPLDQLRLFAEVFGQIKREYVEPVDDKKLLTAAIKGMVSSLDPH
SSFLDKTDYDELQEQTKGRFAGLGIEISQEDGLVKVISPIEDTPAFRAGIRPGDLITRINDKPVRGMTLDKAVKQMRGEP
GTKVTLTIFRKSDDRTFPVTVTRAIIKVQSVKMKILDPGYAYVRITSFQERTTPDLAQKLQDIARQQPNLKGLVLDLRNN
GGGLLQSAVGVAGAFLPPDSVVVSTNGQIADSKQVYRDTYDNYRLPSFDGDPLKNLPPVFKTVPMIVLTNAYSASASEIV
AGALQDSKRAQIMGKTTFGKGSVQTVRPMTADTALRLTTAYYYTPSGRSIQNKGITPDVPVDQYADGDPDDVLVTREVDY
SNHLANTQDPNEKKEQEDREQRRMDQLRILEEQNDKKTPEQRQKDRDRKPIEFGSADDFMMQQALNKLEGKPVQESKSLL
AESTTKSPAGKATASKASGASAKPAAAPKPASAPQ
>Mature_515_residues
MRMKLKNIGLIAAGLATGVFATLQVSASAEQTATAPLPLDQLRLFAEVFGQIKREYVEPVDDKKLLTAAIKGMVSSLDPH
SSFLDKTDYDELQEQTKGRFAGLGIEISQEDGLVKVISPIEDTPAFRAGIRPGDLITRINDKPVRGMTLDKAVKQMRGEP
GTKVTLTIFRKSDDRTFPVTVTRAIIKVQSVKMKILDPGYAYVRITSFQERTTPDLAQKLQDIARQQPNLKGLVLDLRNN
GGGLLQSAVGVAGAFLPPDSVVVSTNGQIADSKQVYRDTYDNYRLPSFDGDPLKNLPPVFKTVPMIVLTNAYSASASEIV
AGALQDSKRAQIMGKTTFGKGSVQTVRPMTADTALRLTTAYYYTPSGRSIQNKGITPDVPVDQYADGDPDDVLVTREVDY
SNHLANTQDPNEKKEQEDREQRRMDQLRILEEQNDKKTPEQRQKDRDRKPIEFGSADDFMMQQALNKLEGKPVQESKSLL
AESTTKSPAGKATASKASGASAKPAAAPKPASAPQ

Specific function: Involved in protection of the bacterium from thermal and osmotic stresses (Potential) [H]

COG id: COG0793

COG function: function code M; Periplasmic protease

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Escherichia coli, GI1788134, Length=339, Percent_Identity=30.6784660766962, Blast_Score=132, Evalue=4e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR005151
- InterPro:   IPR004447 [H]

Pfam domain/function: PF00595 PDZ; PF03572 Peptidase_S41 [H]

EC number: =3.4.21.102 [H]

Molecular weight: Translated: 56300; Mature: 56300

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRMKLKNIGLIAAGLATGVFATLQVSASAEQTATAPLPLDQLRLFAEVFGQIKREYVEPV
CCEEECCCCCHHHHHHHHHEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
DDKKLLTAAIKGMVSSLDPHSSFLDKTDYDELQEQTKGRFAGLGIEISQEDGLVKVISPI
CCHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHCCCEEECCEEECCCCCEEEEECCC
EDTPAFRAGIRPGDLITRINDKPVRGMTLDKAVKQMRGEPGTKVTLTIFRKSDDRTFPVT
CCCCHHHCCCCCCHHEEECCCCCCCCCCHHHHHHHHCCCCCCEEEEEEEECCCCCCCCHH
VTRAIIKVQSVKMKILDPGYAYVRITSFQERTTPDLAQKLQDIARQQPNLKGLVLDLRNN
HHHHHHHHHHHEEEEECCCEEEEEEECCHHCCCHHHHHHHHHHHHHCCCCCEEEEEEECC
GGGLLQSAVGVAGAFLPPDSVVVSTNGQIADSKQVYRDTYDNYRLPSFDGDPLKNLPPVF
CCHHHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHH
KTVPMIVLTNAYSASASEIVAGALQDSKRAQIMGKTTFGKGSVQTVRPMTADTALRLTTA
HHCCCCEEECCCCCCHHHHHHHHHCCCCHHEEEEECCCCCCCCCEECCCCCCCEEEEEEE
YYYTPSGRSIQNKGITPDVPVDQYADGDPDDVLVTREVDYSNHLANTQDPNEKKEQEDRE
EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHCCCCCCCCCHHHHHHHHH
QRRMDQLRILEEQNDKKTPEQRQKDRDRKPIEFGSADDFMMQQALNKLEGKPVQESKSLL
HHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHH
AESTTKSPAGKATASKASGASAKPAAAPKPASAPQ
HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRMKLKNIGLIAAGLATGVFATLQVSASAEQTATAPLPLDQLRLFAEVFGQIKREYVEPV
CCEEECCCCCHHHHHHHHHEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
DDKKLLTAAIKGMVSSLDPHSSFLDKTDYDELQEQTKGRFAGLGIEISQEDGLVKVISPI
CCHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHCCCEEECCEEECCCCCEEEEECCC
EDTPAFRAGIRPGDLITRINDKPVRGMTLDKAVKQMRGEPGTKVTLTIFRKSDDRTFPVT
CCCCHHHCCCCCCHHEEECCCCCCCCCCHHHHHHHHCCCCCCEEEEEEEECCCCCCCCHH
VTRAIIKVQSVKMKILDPGYAYVRITSFQERTTPDLAQKLQDIARQQPNLKGLVLDLRNN
HHHHHHHHHHHEEEEECCCEEEEEEECCHHCCCHHHHHHHHHHHHHCCCCCEEEEEEECC
GGGLLQSAVGVAGAFLPPDSVVVSTNGQIADSKQVYRDTYDNYRLPSFDGDPLKNLPPVF
CCHHHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHH
KTVPMIVLTNAYSASASEIVAGALQDSKRAQIMGKTTFGKGSVQTVRPMTADTALRLTTA
HHCCCCEEECCCCCCHHHHHHHHHCCCCHHEEEEECCCCCCCCCEECCCCCCCEEEEEEE
YYYTPSGRSIQNKGITPDVPVDQYADGDPDDVLVTREVDYSNHLANTQDPNEKKEQEDRE
EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHCCCCCCCCCHHHHHHHHH
QRRMDQLRILEEQNDKKTPEQRQKDRDRKPIEFGSADDFMMQQALNKLEGKPVQESKSLL
HHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHH
AESTTKSPAGKATASKASGASAKPAAAPKPASAPQ
HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9141685 [H]