| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is gpmA
Identifier: 78067655
GI number: 78067655
Start: 3332443
End: 3333255
Strand: Direct
Name: gpmA
Synonym: Bcep18194_A6186
Alternate gene names: 78067655
Gene position: 3332443-3333255 (Clockwise)
Preceding gene: 78067649
Following gene: 78067656
Centisome position: 90.21
GC content: 66.54
Gene sequence:
>813_bases ATGGCGGGCCCGGGTCGGGTCCTGCTCGACGCGCCACAGCTTCCTTCACTACCGACCGCAAGATCCATGTACAAACTCGT TCTCATCCGCCACGGCGAATCGACGTGGAACAAGGAAAACCGCTTCACCGGCTGGGTCGACGTCGACCTGACCGAACAGG GTCGCAACGAGGCCTACCAGGCCGGCGAATTGCTCAAGGAGGCCGGCTACACGTTCGACATCGCGTACACGTCGGTGCTC AAGCGCGCGATCCGCACGCTGTGGCACGTGCAGGACAAGATGGACCTGATGTACCTGCCGGTCGTCCACTCGTGGCGCCT GAACGAGCGCCACTACGGCGCGCTGTCGGGCCTGAACAAGGCGGAAACGGCCGCGAAGTTCGGCGACGACCAGGTGCTCG TGTGGCGCCGCAGCTACGACACGCCGCCGCCCGCGCTCGAGGCGACCGACGAACGCGCGCCGTTCAACGACCCGCGCTAC GCGAAGGTGCCGCGCGAGCAACTGCCGCTCACCGAGTGCCTGAAGGACACGGTCGCGCGCGTGCTGCCGCTGTGGAACGA GTCGATCGCCCCGGCGGTCCGCGCCGGCAAGCAGGTGCTGATCGCCGCGCACGGCAACTCGCTGCGCGCGTTGATCAAGT ACCTCGACGGCATCTCGGACAGCGACATCGTCGGCCTGAACATCCCGAACGGCGTGCCGCTCGTGTATGAGCTCGACGAA AACCTGAAGCCGATCAAGCACTATTACCTCGGCGACCAGGACGCGATCGCGCAGGCGCAAGCCGCCGTCGCGAAGCAGGG CAAGGCGGGCTGA
Upstream 100 bases:
>100_bases CCAGGTTGGTGTAATCGGTAAAGAACGTCACGGAATTCCGCCGGAAAAAGAGAAATCGGATGAGGACAATCCCGCCATTA TAAAATAACCGTCTTGCGCG
Downstream 100 bases:
>100_bases CGCCCGTCGGCCGGGTGAGCCGGGTGAGCCGCGTCCGGTGCGGCCCGCCCGGCCCCGGCCCTTGCCCGGCGCACCGCGCG AACCTTCGCGGCCCCGGCGC
Product: phosphoglyceromutase
Products: NA
Alternate protein names: BPG-dependent PGAM; PGAM; Phosphoglyceromutase; dPGM [H]
Number of amino acids: Translated: 270; Mature: 269
Protein sequence:
>270_residues MAGPGRVLLDAPQLPSLPTARSMYKLVLIRHGESTWNKENRFTGWVDVDLTEQGRNEAYQAGELLKEAGYTFDIAYTSVL KRAIRTLWHVQDKMDLMYLPVVHSWRLNERHYGALSGLNKAETAAKFGDDQVLVWRRSYDTPPPALEATDERAPFNDPRY AKVPREQLPLTECLKDTVARVLPLWNESIAPAVRAGKQVLIAAHGNSLRALIKYLDGISDSDIVGLNIPNGVPLVYELDE NLKPIKHYYLGDQDAIAQAQAAVAKQGKAG
Sequences:
>Translated_270_residues MAGPGRVLLDAPQLPSLPTARSMYKLVLIRHGESTWNKENRFTGWVDVDLTEQGRNEAYQAGELLKEAGYTFDIAYTSVL KRAIRTLWHVQDKMDLMYLPVVHSWRLNERHYGALSGLNKAETAAKFGDDQVLVWRRSYDTPPPALEATDERAPFNDPRY AKVPREQLPLTECLKDTVARVLPLWNESIAPAVRAGKQVLIAAHGNSLRALIKYLDGISDSDIVGLNIPNGVPLVYELDE NLKPIKHYYLGDQDAIAQAQAAVAKQGKAG >Mature_269_residues AGPGRVLLDAPQLPSLPTARSMYKLVLIRHGESTWNKENRFTGWVDVDLTEQGRNEAYQAGELLKEAGYTFDIAYTSVLK RAIRTLWHVQDKMDLMYLPVVHSWRLNERHYGALSGLNKAETAAKFGDDQVLVWRRSYDTPPPALEATDERAPFNDPRYA KVPREQLPLTECLKDTVARVLPLWNESIAPAVRAGKQVLIAAHGNSLRALIKYLDGISDSDIVGLNIPNGVPLVYELDEN LKPIKHYYLGDQDAIAQAQAAVAKQGKAG
Specific function: Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate [H]
COG id: COG0588
COG function: function code G; Phosphoglycerate mutase 1
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily [H]
Homologues:
Organism=Homo sapiens, GI50593010, Length=254, Percent_Identity=56.6929133858268, Blast_Score=308, Evalue=4e-84, Organism=Homo sapiens, GI4505753, Length=249, Percent_Identity=60.6425702811245, Blast_Score=303, Evalue=1e-82, Organism=Homo sapiens, GI71274132, Length=249, Percent_Identity=59.0361445783133, Blast_Score=290, Evalue=9e-79, Organism=Homo sapiens, GI4502445, Length=253, Percent_Identity=50.9881422924901, Blast_Score=266, Evalue=1e-71, Organism=Homo sapiens, GI40353764, Length=253, Percent_Identity=50.9881422924901, Blast_Score=266, Evalue=1e-71, Organism=Homo sapiens, GI310129614, Length=162, Percent_Identity=62.3456790123457, Blast_Score=197, Evalue=1e-50, Organism=Escherichia coli, GI1786970, Length=248, Percent_Identity=65.3225806451613, Blast_Score=334, Evalue=5e-93, Organism=Saccharomyces cerevisiae, GI6322697, Length=246, Percent_Identity=54.4715447154472, Blast_Score=251, Evalue=7e-68, Organism=Saccharomyces cerevisiae, GI6324516, Length=291, Percent_Identity=32.6460481099656, Blast_Score=153, Evalue=2e-38, Organism=Saccharomyces cerevisiae, GI6320183, Length=298, Percent_Identity=32.5503355704698, Blast_Score=147, Evalue=2e-36, Organism=Drosophila melanogaster, GI24646216, Length=253, Percent_Identity=51.7786561264822, Blast_Score=275, Evalue=3e-74, Organism=Drosophila melanogaster, GI85725270, Length=250, Percent_Identity=52.4, Blast_Score=264, Evalue=5e-71, Organism=Drosophila melanogaster, GI85725272, Length=250, Percent_Identity=52.4, Blast_Score=264, Evalue=5e-71, Organism=Drosophila melanogaster, GI24650981, Length=250, Percent_Identity=52.4, Blast_Score=264, Evalue=5e-71, Organism=Drosophila melanogaster, GI28571815, Length=248, Percent_Identity=40.3225806451613, Blast_Score=181, Evalue=5e-46, Organism=Drosophila melanogaster, GI28571817, Length=251, Percent_Identity=40.6374501992032, Blast_Score=181, Evalue=6e-46, Organism=Drosophila melanogaster, GI24648979, Length=248, Percent_Identity=40.3225806451613, Blast_Score=181, Evalue=6e-46,
Paralogues:
None
Copy number: 960 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013078 - InterPro: IPR001345 - InterPro: IPR005952 [H]
Pfam domain/function: PF00300 PGAM [H]
EC number: =5.4.2.1 [H]
Molecular weight: Translated: 30115; Mature: 29983
Theoretical pI: Translated: 7.16; Mature: 7.16
Prosite motif: PS00175 PG_MUTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGPGRVLLDAPQLPSLPTARSMYKLVLIRHGESTWNKENRFTGWVDVDLTEQGRNEAYQ CCCCCCEEEECCCCCCCCCHHHHHEEEEEECCCCCCCCCCCEEEEEEEEECCCCCHHHHH AGELLKEAGYTFDIAYTSVLKRAIRTLWHVQDKMDLMYLPVVHSWRLNERHYGALSGLNK HHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHCCCEEEECEECCEECCCCHHHHHHCCCH AETAAKFGDDQVLVWRRSYDTPPPALEATDERAPFNDPRYAKVPREQLPLTECLKDTVAR HHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHH VLPLWNESIAPAVRAGKQVLIAAHGNSLRALIKYLDGISDSDIVGLNIPNGVPLVYELDE HHHHCCCHHHHHHHCCCEEEEEECCCHHHHHHHHHCCCCCCCEEEEECCCCCCEEEECCC NLKPIKHYYLGDQDAIAQAQAAVAKQGKAG CCCHHHHHHCCCHHHHHHHHHHHHHCCCCC >Mature Secondary Structure AGPGRVLLDAPQLPSLPTARSMYKLVLIRHGESTWNKENRFTGWVDVDLTEQGRNEAYQ CCCCCEEEECCCCCCCCCHHHHHEEEEEECCCCCCCCCCCEEEEEEEEECCCCCHHHHH AGELLKEAGYTFDIAYTSVLKRAIRTLWHVQDKMDLMYLPVVHSWRLNERHYGALSGLNK HHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHCCCEEEECEECCEECCCCHHHHHHCCCH AETAAKFGDDQVLVWRRSYDTPPPALEATDERAPFNDPRYAKVPREQLPLTECLKDTVAR HHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHH VLPLWNESIAPAVRAGKQVLIAAHGNSLRALIKYLDGISDSDIVGLNIPNGVPLVYELDE HHHHCCCHHHHHHHCCCEEEEEECCCHHHHHHHHHCCCCCCCEEEEECCCCCCEEEECCC NLKPIKHYYLGDQDAIAQAQAAVAKQGKAG CCCHHHHHHCCCHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA