| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is pykA [H]
Identifier: 78067427
GI number: 78067427
Start: 3087775
End: 3089211
Strand: Reverse
Name: pykA [H]
Synonym: Bcep18194_A5958
Alternate gene names: 78067427
Gene position: 3089211-3087775 (Counterclockwise)
Preceding gene: 78067428
Following gene: 78067426
Centisome position: 83.62
GC content: 67.29
Gene sequence:
>1437_bases ATGCAGCGCGCCACCAAGATAGTCGCCACGATCGGCCCGGCTTCCAGTTCGCCGGAGATTCTGCTGCAGATGATGCAGGC GGGCCTCGACGTCGTGCGGCTCAATTTTTCGCACGGCACGGCCGACGATCACCGCCAGCGCGCCGAGATGGTGCGCGAGG CCGCCCGCAAGGTCGGCCGCGAGATCGCGATCATGGCCGACCTCCAGGGCCCGAAGATCCGCGTCGGCAAGTTCGAGAAC GGCAAGACGACGCTCGAGCCGGGCCAGGCCTTCATCCTCGACGCGGGCTGCGAGCTGGGTAACGACGAACGCGTCGGCCT CGACTACAAGGAACTGCCGCGCGACCTGCGCACGGGCGACCTGCTGCTGCTGAACGACGGCCTGATCGTGCTGACCGTCG AGCGCGTGCTCGGCGACGAGATCCACACGATCGTCAAGGTGGGCGGCGAGCTGTCGAACAACAAGGGCATCAACCGCCAG GGCGGCGGCCTGTCGGCGCCCGCGCTGACCGCGAAGGACATGGAAGACATCCGCACCGCGATGTCGCTCGGCGCGGACCT GGTGGCGGTGTCGTTCCCGAAGAACGCGACCGACATGGAAATGGCGCGCCAGCTCGCGAACATCGCGGGCGCGCCGTACG GCATCAAGCCGAAAATGATCGCGAAGATCGAGCGCGCGGAAGCGATCCCGGCGCTGCAAAGCATTCTCGACGCGTCCGAC GGCATCATGGTCGCGCGTGGCGACCTCGCGGTGGAAGTGGGCAACGCGGCCGTGCCGGCACTGCAGAAGCGGATGATCCG GATGGCGCGCGAGTCGAACAAGCTCGTGATCACCGCGACGCAGATGATGGAATCGATGATCCACGCACCCGTGCCGACCC GCGCGGAAGTGTCGGACGTCGCGAACGCGGTGCTCGACGGCACCGACGCGGTGATGCTGTCGGCCGAGACGGCCGCCGGC AAGTATCCGGTCGTGACGATCGAGACGATGGCGGCCGTGTGCGTCGAGGCGGAAAAGTCGGAGCACGTCGAGCTGGACAA GGATTTCCTCGACCGCACGTTCACGCGGATCGACCAGTCGATCGCGATGGGCGCGCTGTTCACCGCGTACCACCTGGGTG CGAAGGCGATCATCGCGCTGACCGAATCGGGCGCGACCGCGCTGTGGATGTCGCGCCACTACACGCACGTGCCGATCTTT GCGCTGACGCCGCGCGTCGGCAGCGAGCGCACGATGGCGCTGTACCGCAACGTGACGCCGCTGCACGTCGACTTCAACAG CGACCGCGACTCGGCGCTGCAGGCGGCGCTCGAGATCGTCGTCAAGCAGGGCTACGTGCAGCACGGCGACATGGTCGTGC TGACCGTCGGCGAGCCGATGGGGCAGGCGGGTGGCACCAACACGCTGAAGATCGTGCGGGTCGGCGAGCACTATTGA
Upstream 100 bases:
>100_bases CACCGGCACGCCCCCCGGAACGGCCGCCGCTGGGCCCGCCGTTTCCGGCTCTCGCAGCGTTTCACCCAGCGCATCCACCT TGATCCAGATGAGGAGTTTC
Downstream 100 bases:
>100_bases GCGCCGACTGAGCATCGGGCCGGCCTGCGGGCCGGCCGCCCGGATCGGCTGAAAAAAGCGATCCGGCACCGTTTTTCATG CGAAAGCCGCGTGGGGTCCG
Product: pyruvate kinase
Products: NA
Alternate protein names: PK [H]
Number of amino acids: Translated: 478; Mature: 478
Protein sequence:
>478_residues MQRATKIVATIGPASSSPEILLQMMQAGLDVVRLNFSHGTADDHRQRAEMVREAARKVGREIAIMADLQGPKIRVGKFEN GKTTLEPGQAFILDAGCELGNDERVGLDYKELPRDLRTGDLLLLNDGLIVLTVERVLGDEIHTIVKVGGELSNNKGINRQ GGGLSAPALTAKDMEDIRTAMSLGADLVAVSFPKNATDMEMARQLANIAGAPYGIKPKMIAKIERAEAIPALQSILDASD GIMVARGDLAVEVGNAAVPALQKRMIRMARESNKLVITATQMMESMIHAPVPTRAEVSDVANAVLDGTDAVMLSAETAAG KYPVVTIETMAAVCVEAEKSEHVELDKDFLDRTFTRIDQSIAMGALFTAYHLGAKAIIALTESGATALWMSRHYTHVPIF ALTPRVGSERTMALYRNVTPLHVDFNSDRDSALQAALEIVVKQGYVQHGDMVVLTVGEPMGQAGGTNTLKIVRVGEHY
Sequences:
>Translated_478_residues MQRATKIVATIGPASSSPEILLQMMQAGLDVVRLNFSHGTADDHRQRAEMVREAARKVGREIAIMADLQGPKIRVGKFEN GKTTLEPGQAFILDAGCELGNDERVGLDYKELPRDLRTGDLLLLNDGLIVLTVERVLGDEIHTIVKVGGELSNNKGINRQ GGGLSAPALTAKDMEDIRTAMSLGADLVAVSFPKNATDMEMARQLANIAGAPYGIKPKMIAKIERAEAIPALQSILDASD GIMVARGDLAVEVGNAAVPALQKRMIRMARESNKLVITATQMMESMIHAPVPTRAEVSDVANAVLDGTDAVMLSAETAAG KYPVVTIETMAAVCVEAEKSEHVELDKDFLDRTFTRIDQSIAMGALFTAYHLGAKAIIALTESGATALWMSRHYTHVPIF ALTPRVGSERTMALYRNVTPLHVDFNSDRDSALQAALEIVVKQGYVQHGDMVVLTVGEPMGQAGGTNTLKIVRVGEHY >Mature_478_residues MQRATKIVATIGPASSSPEILLQMMQAGLDVVRLNFSHGTADDHRQRAEMVREAARKVGREIAIMADLQGPKIRVGKFEN GKTTLEPGQAFILDAGCELGNDERVGLDYKELPRDLRTGDLLLLNDGLIVLTVERVLGDEIHTIVKVGGELSNNKGINRQ GGGLSAPALTAKDMEDIRTAMSLGADLVAVSFPKNATDMEMARQLANIAGAPYGIKPKMIAKIERAEAIPALQSILDASD GIMVARGDLAVEVGNAAVPALQKRMIRMARESNKLVITATQMMESMIHAPVPTRAEVSDVANAVLDGTDAVMLSAETAAG KYPVVTIETMAAVCVEAEKSEHVELDKDFLDRTFTRIDQSIAMGALFTAYHLGAKAIIALTESGATALWMSRHYTHVPIF ALTPRVGSERTMALYRNVTPLHVDFNSDRDSALQAALEIVVKQGYVQHGDMVVLTVGEPMGQAGGTNTLKIVRVGEHY
Specific function: Glycolysis; final step. [C]
COG id: COG0469
COG function: function code G; Pyruvate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pyruvate kinase family [H]
Homologues:
Organism=Homo sapiens, GI33286422, Length=493, Percent_Identity=36.7139959432049, Blast_Score=281, Evalue=7e-76, Organism=Homo sapiens, GI33286420, Length=493, Percent_Identity=36.7139959432049, Blast_Score=281, Evalue=7e-76, Organism=Homo sapiens, GI33286418, Length=493, Percent_Identity=36.3083164300203, Blast_Score=277, Evalue=1e-74, Organism=Homo sapiens, GI10835121, Length=496, Percent_Identity=36.8951612903226, Blast_Score=276, Evalue=2e-74, Organism=Homo sapiens, GI32967597, Length=496, Percent_Identity=36.8951612903226, Blast_Score=276, Evalue=4e-74, Organism=Homo sapiens, GI310128732, Length=291, Percent_Identity=36.0824742268041, Blast_Score=161, Evalue=1e-39, Organism=Homo sapiens, GI310128730, Length=291, Percent_Identity=36.0824742268041, Blast_Score=161, Evalue=1e-39, Organism=Homo sapiens, GI310128736, Length=239, Percent_Identity=33.4728033472803, Blast_Score=127, Evalue=2e-29, Organism=Homo sapiens, GI310128734, Length=239, Percent_Identity=33.4728033472803, Blast_Score=127, Evalue=2e-29, Organism=Homo sapiens, GI310128738, Length=218, Percent_Identity=31.1926605504587, Blast_Score=105, Evalue=1e-22, Organism=Escherichia coli, GI1788160, Length=481, Percent_Identity=52.5987525987526, Blast_Score=457, Evalue=1e-130, Organism=Escherichia coli, GI1787965, Length=471, Percent_Identity=38.6411889596603, Blast_Score=303, Evalue=2e-83, Organism=Caenorhabditis elegans, GI17544584, Length=484, Percent_Identity=36.7768595041322, Blast_Score=282, Evalue=2e-76, Organism=Caenorhabditis elegans, GI71984413, Length=487, Percent_Identity=38.6036960985626, Blast_Score=266, Evalue=1e-71, Organism=Caenorhabditis elegans, GI17506829, Length=487, Percent_Identity=38.6036960985626, Blast_Score=266, Evalue=1e-71, Organism=Caenorhabditis elegans, GI71984406, Length=487, Percent_Identity=38.8090349075975, Blast_Score=266, Evalue=1e-71, Organism=Caenorhabditis elegans, GI17506831, Length=487, Percent_Identity=38.8090349075975, Blast_Score=266, Evalue=2e-71, Organism=Saccharomyces cerevisiae, GI6319279, Length=487, Percent_Identity=34.7022587268994, Blast_Score=262, Evalue=1e-70, Organism=Saccharomyces cerevisiae, GI6324923, Length=492, Percent_Identity=35.9756097560976, Blast_Score=258, Evalue=2e-69, Organism=Drosophila melanogaster, GI28571814, Length=493, Percent_Identity=38.7423935091278, Blast_Score=285, Evalue=5e-77, Organism=Drosophila melanogaster, GI24648964, Length=493, Percent_Identity=38.7423935091278, Blast_Score=285, Evalue=6e-77, Organism=Drosophila melanogaster, GI24648966, Length=448, Percent_Identity=35.9375, Blast_Score=235, Evalue=6e-62, Organism=Drosophila melanogaster, GI24581235, Length=489, Percent_Identity=32.1063394683027, Blast_Score=228, Evalue=5e-60, Organism=Drosophila melanogaster, GI24646914, Length=272, Percent_Identity=36.0294117647059, Blast_Score=144, Evalue=2e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001697 - InterPro: IPR015813 - InterPro: IPR011037 - InterPro: IPR015794 - InterPro: IPR018209 - InterPro: IPR015793 - InterPro: IPR015795 - InterPro: IPR015806 [H]
Pfam domain/function: PF00224 PK; PF02887 PK_C [H]
EC number: =2.7.1.40 [H]
Molecular weight: Translated: 51428; Mature: 51428
Theoretical pI: Translated: 5.82; Mature: 5.82
Prosite motif: PS00136 SUBTILASE_ASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRATKIVATIGPASSSPEILLQMMQAGLDVVRLNFSHGTADDHRQRAEMVREAARKVGR CCCHHEEEEEECCCCCCHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCC EIAIMADLQGPKIRVGKFENGKTTLEPGQAFILDAGCELGNDERVGLDYKELPRDLRTGD EEEEEEECCCCEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHCHHCCCCC LLLLNDGLIVLTVERVLGDEIHTIVKVGGELSNNKGINRQGGGLSAPALTAKDMEDIRTA EEEEECCEEEEEEHHHHCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH MSLGADLVAVSFPKNATDMEMARQLANIAGAPYGIKPKMIAKIERAEAIPALQSILDASD HHCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC GIMVARGDLAVEVGNAAVPALQKRMIRMARESNKLVITATQMMESMIHAPVPTRAEVSDV CEEEEECCEEEEECCCHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHCCCCCCCHHHHHH ANAVLDGTDAVMLSAETAAGKYPVVTIETMAAVCVEAEKSEHVELDKDFLDRTFTRIDQS HHHHHCCCCEEEEEECCCCCCCCEEEHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH IAMGALFTAYHLGAKAIIALTESGATALWMSRHYTHVPIFALTPRVGSERTMALYRNVTP HHHHHHHHHHHCCCEEEEEEECCCCEEEEECCCCCCCEEEEECCCCCCCHHHHHHCCCCE LHVDFNSDRDSALQAALEIVVKQGYVQHGDMVVLTVGEPMGQAGGTNTLKIVRVGEHY EEEECCCCHHHHHHHHHHHHHHHCCEECCCEEEEECCCCCCCCCCCCEEEEEEECCCC >Mature Secondary Structure MQRATKIVATIGPASSSPEILLQMMQAGLDVVRLNFSHGTADDHRQRAEMVREAARKVGR CCCHHEEEEEECCCCCCHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCC EIAIMADLQGPKIRVGKFENGKTTLEPGQAFILDAGCELGNDERVGLDYKELPRDLRTGD EEEEEEECCCCEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHCHHCCCCC LLLLNDGLIVLTVERVLGDEIHTIVKVGGELSNNKGINRQGGGLSAPALTAKDMEDIRTA EEEEECCEEEEEEHHHHCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH MSLGADLVAVSFPKNATDMEMARQLANIAGAPYGIKPKMIAKIERAEAIPALQSILDASD HHCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC GIMVARGDLAVEVGNAAVPALQKRMIRMARESNKLVITATQMMESMIHAPVPTRAEVSDV CEEEEECCEEEEECCCHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHCCCCCCCHHHHHH ANAVLDGTDAVMLSAETAAGKYPVVTIETMAAVCVEAEKSEHVELDKDFLDRTFTRIDQS HHHHHCCCCEEEEEECCCCCCCCEEEHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH IAMGALFTAYHLGAKAIIALTESGATALWMSRHYTHVPIFALTPRVGSERTMALYRNVTP HHHHHHHHHHHCCCEEEEEEECCCCEEEEECCCCCCCEEEEECCCCCCCHHHHHHCCCCE LHVDFNSDRDSALQAALEIVVKQGYVQHGDMVVLTVGEPMGQAGGTNTLKIVRVGEHY EEEECCCCHHHHHHHHHHHHHHHCCEECCCEEEEECCCCCCCCCCCCEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12522265 [H]