| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is coaBC [H]
Identifier: 78067315
GI number: 78067315
Start: 2961897
End: 2963108
Strand: Direct
Name: coaBC [H]
Synonym: Bcep18194_A5846
Alternate gene names: 78067315
Gene position: 2961897-2963108 (Clockwise)
Preceding gene: 78067314
Following gene: 78067316
Centisome position: 80.18
GC content: 69.06
Gene sequence:
>1212_bases TTGGCACACGCAGAACTCGCAGGAAAACACCTCGTTCTCGGCCTGACGGGCGGCATCGCCTGCTACAAGATCGCCGAGCT CACCCGGCTGCTCACGAAGGCCGGCGCGACCGTACAGGTCGCGATGACCGAAGCCGCTACCCAGTTCATCACGCCCGTCA CGATGCAGGCGCTGTCGGGCCGGCCCGTCTACACGAGCCAGTGGGACGCGCGCGTCGACAACAACATGGCACACATCGAC CTGTCGCGCGAAGCCGATGCAATCGTGATCGCGCCTGCGTCGACGGACTTCCTCGCGAAGCTCGCGCACGGATTCGCGGA CGACCTGCTGTCGACGCTGTGCGTCGCGCGCGATTGCCCGCTGCTCGTCGTTCCCGCCATGAACCGCCAGATGTGGCAGA ACCCGGCCACGCAGCGCAACGCAGCGCAACTGCGCGCGGACGGCGTGTCGGTGCTCGGCCCGGATTCGGGCGCGCAGGCC TGCGGCGAAGTCGGCGACGGCCGCATGCTCGAACCCGAGGCGATCTACGAAGCGATCGTCGCGCACTTCGCGCCGAAGGT GCTCGCGCACCGGCGCGTGCTGATCACGGCCGGGCCGACGTTCGAACCGCTCGACCCGGTGCGCGGCCTCACGAACCGCT CGAGCGGCAAGATGGGCTTCGCGCTCGCGCGTGCCGCACAGCAAGCCGGCGCCGACGTGCATCTCGTCGCGGGGCCGGTG GCGCTCGACACGCCGTGGGGCGTCTACCGGCAGGACGTGCAGACGGCCCAGCAGATGTACGACGCGGTCATGCATGCTGT CGCCGATGCCGATATCTTCATTGCGGTCGCTGCGGTCGCCGACTGGCGCGCCGCCCAGCCGGCCGAGCACAAGATGAAGA AGACGGCCGACCACAAGGTGCCCGCGCTCGCGTTCGTCGAGAATCCCGACATCCTCGCGTCGGTCGCGGCGCTGCCCGAT CCGCCGTTCTGCGTCGGGTTCGCGGCCGAAAGCGGCGACCTCGACGTGCACGGCGACGAGAAGCGCAAGCGCAAGAACGT ACCGTTGCTCGTCGGCAACCTCGGCCCGCTGACGTTCGGCCGCGACGACAACGAAGTCGTGCTGTTCGAAGCCGCCGGCC TCACGCGCCTGCCGCGTGCGCCGAAGGACGAACTCGCGCACACGCTCGTCGCGGAAATCGCGAAGCGCCTGCCCGACAAC CGCCTGATCTGA
Upstream 100 bases:
>100_bases GACGAACTGCGTCGCGTGCGCGGCTCGCGCTAAGCGCGCATACTCGGCGTCGACGGCCGGCTTCGCGCCGGCCGTTCCGT TTGACCCTTGGAGGCCTGAG
Downstream 100 bases:
>100_bases TCTCCCGCGCGGCAGCGTTGCTGCCGCGCCCTTCCCGCCCCATCCGACGACCGCATGAAACTCGACCTGAAGATTCTCGA CGCGCGCATGCGCGACTACC
Product: bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase
Products: NA
Alternate protein names: DNA/pantothenate metabolism flavoprotein; Phosphopantothenoylcysteine decarboxylase; PPCDC; CoaC; Phosphopantothenate--cysteine ligase; CoaB; PPC synthetase; PPCS; Phosphopantothenoylcysteine synthase [H]
Number of amino acids: Translated: 403; Mature: 402
Protein sequence:
>403_residues MAHAELAGKHLVLGLTGGIACYKIAELTRLLTKAGATVQVAMTEAATQFITPVTMQALSGRPVYTSQWDARVDNNMAHID LSREADAIVIAPASTDFLAKLAHGFADDLLSTLCVARDCPLLVVPAMNRQMWQNPATQRNAAQLRADGVSVLGPDSGAQA CGEVGDGRMLEPEAIYEAIVAHFAPKVLAHRRVLITAGPTFEPLDPVRGLTNRSSGKMGFALARAAQQAGADVHLVAGPV ALDTPWGVYRQDVQTAQQMYDAVMHAVADADIFIAVAAVADWRAAQPAEHKMKKTADHKVPALAFVENPDILASVAALPD PPFCVGFAAESGDLDVHGDEKRKRKNVPLLVGNLGPLTFGRDDNEVVLFEAAGLTRLPRAPKDELAHTLVAEIAKRLPDN RLI
Sequences:
>Translated_403_residues MAHAELAGKHLVLGLTGGIACYKIAELTRLLTKAGATVQVAMTEAATQFITPVTMQALSGRPVYTSQWDARVDNNMAHID LSREADAIVIAPASTDFLAKLAHGFADDLLSTLCVARDCPLLVVPAMNRQMWQNPATQRNAAQLRADGVSVLGPDSGAQA CGEVGDGRMLEPEAIYEAIVAHFAPKVLAHRRVLITAGPTFEPLDPVRGLTNRSSGKMGFALARAAQQAGADVHLVAGPV ALDTPWGVYRQDVQTAQQMYDAVMHAVADADIFIAVAAVADWRAAQPAEHKMKKTADHKVPALAFVENPDILASVAALPD PPFCVGFAAESGDLDVHGDEKRKRKNVPLLVGNLGPLTFGRDDNEVVLFEAAGLTRLPRAPKDELAHTLVAEIAKRLPDN RLI >Mature_402_residues AHAELAGKHLVLGLTGGIACYKIAELTRLLTKAGATVQVAMTEAATQFITPVTMQALSGRPVYTSQWDARVDNNMAHIDL SREADAIVIAPASTDFLAKLAHGFADDLLSTLCVARDCPLLVVPAMNRQMWQNPATQRNAAQLRADGVSVLGPDSGAQAC GEVGDGRMLEPEAIYEAIVAHFAPKVLAHRRVLITAGPTFEPLDPVRGLTNRSSGKMGFALARAAQQAGADVHLVAGPVA LDTPWGVYRQDVQTAQQMYDAVMHAVADADIFIAVAAVADWRAAQPAEHKMKKTADHKVPALAFVENPDILASVAALPDP PFCVGFAAESGDLDVHGDEKRKRKNVPLLVGNLGPLTFGRDDNEVVLFEAAGLTRLPRAPKDELAHTLVAEIAKRLPDNR LI
Specific function: Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine [H]
COG id: COG0452
COG function: function code H; Phosphopantothenoylcysteine synthetase/decarboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the PPC synthetase family [H]
Homologues:
Organism=Homo sapiens, GI71725351, Length=177, Percent_Identity=35.0282485875706, Blast_Score=90, Evalue=4e-18, Organism=Escherichia coli, GI87082301, Length=398, Percent_Identity=49.748743718593, Blast_Score=337, Evalue=1e-93, Organism=Caenorhabditis elegans, GI17560194, Length=177, Percent_Identity=33.8983050847458, Blast_Score=80, Evalue=2e-15, Organism=Saccharomyces cerevisiae, GI6322762, Length=189, Percent_Identity=31.2169312169312, Blast_Score=77, Evalue=4e-15, Organism=Drosophila melanogaster, GI24657262, Length=190, Percent_Identity=33.1578947368421, Blast_Score=94, Evalue=2e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005252 - InterPro: IPR007085 - InterPro: IPR003382 [H]
Pfam domain/function: PF04127 DFP; PF02441 Flavoprotein [H]
EC number: =4.1.1.36; =6.3.2.5 [H]
Molecular weight: Translated: 42978; Mature: 42847
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHAELAGKHLVLGLTGGIACYKIAELTRLLTKAGATVQVAMTEAATQFITPVTMQALSG CCCCHHCCCEEEEEECCCHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHCC RPVYTSQWDARVDNNMAHIDLSREADAIVIAPASTDFLAKLAHGFADDLLSTLCVARDCP CCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCC LLVVPAMNRQMWQNPATQRNAAQLRADGVSVLGPDSGAQACGEVGDGRMLEPEAIYEAIV EEEEECCCHHHHCCCCCCHHHHHHHHCCEEEECCCCCHHHHHHCCCCCCCCHHHHHHHHH AHFAPKVLAHRRVLITAGPTFEPLDPVRGLTNRSSGKMGFALARAAQQAGADVHLVAGPV HHHHHHHHHCCEEEEEECCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCE ALDTPWGVYRQDVQTAQQMYDAVMHAVADADIFIAVAAVADWRAAQPAEHKMKKTADHKV EECCCCHHHHHHHHHHHHHHHHHHHHHCCCHHEEHHHHHHHCCCCCCHHHHHHHHHCCCC PALAFVENPDILASVAALPDPPFCVGFAAESGDLDVHGDEKRKRKNVPLLVGNLGPLTFG CEEEEECCCHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHCCCCEEEECCCCEEEC RDDNEVVLFEAAGLTRLPRAPKDELAHTLVAEIAKRLPDNRLI CCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure AHAELAGKHLVLGLTGGIACYKIAELTRLLTKAGATVQVAMTEAATQFITPVTMQALSG CCCHHCCCEEEEEECCCHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHCC RPVYTSQWDARVDNNMAHIDLSREADAIVIAPASTDFLAKLAHGFADDLLSTLCVARDCP CCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCC LLVVPAMNRQMWQNPATQRNAAQLRADGVSVLGPDSGAQACGEVGDGRMLEPEAIYEAIV EEEEECCCHHHHCCCCCCHHHHHHHHCCEEEECCCCCHHHHHHCCCCCCCCHHHHHHHHH AHFAPKVLAHRRVLITAGPTFEPLDPVRGLTNRSSGKMGFALARAAQQAGADVHLVAGPV HHHHHHHHHCCEEEEEECCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCE ALDTPWGVYRQDVQTAQQMYDAVMHAVADADIFIAVAAVADWRAAQPAEHKMKKTADHKV EECCCCHHHHHHHHHHHHHHHHHHHHHCCCHHEEHHHHHHHCCCCCCHHHHHHHHHCCCC PALAFVENPDILASVAALPDPPFCVGFAAESGDLDVHGDEKRKRKNVPLLVGNLGPLTFG CEEEEECCCHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHCCCCEEEECCCCEEEC RDDNEVVLFEAAGLTRLPRAPKDELAHTLVAEIAKRLPDNRLI CCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]