| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is dut
Identifier: 78067316
GI number: 78067316
Start: 2963163
End: 2963609
Strand: Direct
Name: dut
Synonym: Bcep18194_A5847
Alternate gene names: 78067316
Gene position: 2963163-2963609 (Clockwise)
Preceding gene: 78067315
Following gene: 78067321
Centisome position: 80.21
GC content: 67.11
Gene sequence:
>447_bases ATGAAACTCGACCTGAAGATTCTCGACGCGCGCATGCGCGACTACCTGCCCGCCTATGCAACCACCGGCAGCGCGGGCCT CGACCTGCGTGCGTGCCTCGATGCACCGGTCACGCTGCAGCCGGGCGAAACGACGCTCGTGCCGACCGGCCTCGCGATCC ACCTCGCTGACCCCGGCTACGCGGCGCTGATCCTGCCGCGCTCGGGCCTCGGCCACAAGCACGGCATCGTGCTCGGCAAC CTCGTCGGCCTGATCGATTCCGACTACCAGGGCCAGTTGATGATCTCGACGTGGAACCGCGGCCAGACCGAGTTCGTGCT GAATCCGTTCGAGCGGCTCGCCCAGCTCGTGATCGTGCCGGTCGTCCAGGCGCAGTTCAACATCGTCGACGACTTCGCGG AAAGCGATCGTGGCGACGGCGGCTTCGGCAGCACCGGCCGTCACTGA
Upstream 100 bases:
>100_bases CGTCGCGGAAATCGCGAAGCGCCTGCCCGACAACCGCCTGATCTGATCTCCCGCGCGGCAGCGTTGCTGCCGCGCCCTTC CCGCCCCATCCGACGACCGC
Downstream 100 bases:
>100_bases ACGGCGCAACAAAAAAGGGGCCTCGCGGCCCCTTTTTCTTTTCCTGCGCCGTCATTCCTCGACGGCTTGCGCGATCCGCA CGGGTGTCAGGTCGCGCTGC
Product: deoxyuridine 5'-triphosphate nucleotidohydrolase
Products: NA
Alternate protein names: dUTPase; dUTP pyrophosphatase [H]
Number of amino acids: Translated: 148; Mature: 148
Protein sequence:
>148_residues MKLDLKILDARMRDYLPAYATTGSAGLDLRACLDAPVTLQPGETTLVPTGLAIHLADPGYAALILPRSGLGHKHGIVLGN LVGLIDSDYQGQLMISTWNRGQTEFVLNPFERLAQLVIVPVVQAQFNIVDDFAESDRGDGGFGSTGRH
Sequences:
>Translated_148_residues MKLDLKILDARMRDYLPAYATTGSAGLDLRACLDAPVTLQPGETTLVPTGLAIHLADPGYAALILPRSGLGHKHGIVLGN LVGLIDSDYQGQLMISTWNRGQTEFVLNPFERLAQLVIVPVVQAQFNIVDDFAESDRGDGGFGSTGRH >Mature_148_residues MKLDLKILDARMRDYLPAYATTGSAGLDLRACLDAPVTLQPGETTLVPTGLAIHLADPGYAALILPRSGLGHKHGIVLGN LVGLIDSDYQGQLMISTWNRGQTEFVLNPFERLAQLVIVPVVQAQFNIVDDFAESDRGDGGFGSTGRH
Specific function: This enzyme is involved in nucleotide metabolism:it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA [H]
COG id: COG0756
COG function: function code F; dUTPase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the dUTPase family [H]
Homologues:
Organism=Homo sapiens, GI4503423, Length=146, Percent_Identity=32.8767123287671, Blast_Score=77, Evalue=5e-15, Organism=Homo sapiens, GI70906444, Length=132, Percent_Identity=34.8484848484849, Blast_Score=77, Evalue=5e-15, Organism=Homo sapiens, GI70906441, Length=146, Percent_Identity=32.8767123287671, Blast_Score=76, Evalue=1e-14, Organism=Escherichia coli, GI1790071, Length=149, Percent_Identity=71.1409395973154, Blast_Score=221, Evalue=2e-59, Organism=Caenorhabditis elegans, GI71988561, Length=134, Percent_Identity=38.0597014925373, Blast_Score=83, Evalue=5e-17, Organism=Saccharomyces cerevisiae, GI6319729, Length=145, Percent_Identity=36.551724137931, Blast_Score=78, Evalue=7e-16, Organism=Drosophila melanogaster, GI24583610, Length=149, Percent_Identity=31.5436241610738, Blast_Score=73, Evalue=6e-14, Organism=Drosophila melanogaster, GI19921126, Length=149, Percent_Identity=31.5436241610738, Blast_Score=73, Evalue=6e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008180 - InterPro: IPR008181 [H]
Pfam domain/function: PF00692 dUTPase [H]
EC number: =3.6.1.23 [H]
Molecular weight: Translated: 15899; Mature: 15899
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLDLKILDARMRDYLPAYATTGSAGLDLRACLDAPVTLQPGETTLVPTGLAIHLADPGY CCCCHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCEEECCCCEEEEECCEEEEECCCCE AALILPRSGLGHKHGIVLGNLVGLIDSDYQGQLMISTWNRGQTEFVLNPFERLAQLVIVP EEEEEECCCCCCCCCEEEHHEEHHCCCCCCCEEEEEECCCCCEEEEECHHHHHHHHHHHH VVQAQFNIVDDFAESDRGDGGFGSTGRH HHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MKLDLKILDARMRDYLPAYATTGSAGLDLRACLDAPVTLQPGETTLVPTGLAIHLADPGY CCCCHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCEEECCCCEEEEECCEEEEECCCCE AALILPRSGLGHKHGIVLGNLVGLIDSDYQGQLMISTWNRGQTEFVLNPFERLAQLVIVP EEEEEECCCCCCCCCEEEHHEEHHCCCCCCCEEEEEECCCCCEEEEECHHHHHHHHHHHH VVQAQFNIVDDFAESDRGDGGFGSTGRH HHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA