| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78067259
Identifier: 78067259
GI number: 78067259
Start: 2904082
End: 2904822
Strand: Direct
Name: 78067259
Synonym: Bcep18194_A5790
Alternate gene names: NA
Gene position: 2904082-2904822 (Clockwise)
Preceding gene: 78067258
Following gene: 78067262
Centisome position: 78.61
GC content: 67.48
Gene sequence:
>741_bases ATGACCAAGAAATCCGCACTCGCGCTGTCGCTCGCCCTTGCCGCCGCCGTTCCCGTCGCGCTGACGCTCGCGTCGACCAC CGCGCACGCGCAAACCGCGAACCCGCACTTTCCGGAGCCGGCAGGCGTGCTGTCGCTGTCGTCGCAGGCCAGCGCCGACG TGCCGCAGGACATCATCCACATCACGCTGTTCTACGAGCAGCAAGCCAAGGATCCGGGCAGCCTCACCGCTCAGTTGAAC CAGCGCGCCGACGCAGCGCTGTCGCAGGCGAAGGGTGTATCGGGCGTCACCGCACACACGGGCGCATTCTCCGTGTACCC GAGCACCGATCGCGACGGCAAGATCTCCGCATGGCGCGGCCGCACCGAGGTCGCGCTCGAATCGCGCGATTTCGCGGCGG CGTCGAAGCTTGCCGGCCAGTTGTCGAACCTGATGCAGGTCGCGAACGTCGAGTTCTCGCTGTCGCCCGAAGCACAGCGT GCCGCCGAGCAGAAGCTCACGACCGAAGCGATCAAGTCGTTCCGCGCCCGCGCGGACGAAGCCGCGAAGGCATTCGGCTA CGGCAGCTACACGATCCGCGACGTGAACGTCGGCGGCGGCCGCAACGTGCAGCCGTACCCGCGCATGATGGCGATGGCCG CGGCGCCGATGGACAGCGCGAAGATGAGCGCACCGATCGCAGTCGAAGGCGGCAAGGCCACCGTGTCGGTCACCGTCAAC GGCTCCGTGCAGATGAAGTAA
Upstream 100 bases:
>100_bases TGTCGGCCGATCAGGCCGGCTGTCGTTTTTTTCGTCGCGCGGTACGCCCGCGTCGTGCACGCGCGATCCGCGTGTACGCC CTCGCACAAGGAGTCCAACA
Downstream 100 bases:
>100_bases CGCACAGCGCACGGCAGTCCGAAATGAAAAACGCCGGCCCTCGGGCCGGCGTTTTTCATTGACCTGCATGTTGCCGATGC ACACGCCGATCGCGCGTGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 246; Mature: 245
Protein sequence:
>246_residues MTKKSALALSLALAAAVPVALTLASTTAHAQTANPHFPEPAGVLSLSSQASADVPQDIIHITLFYEQQAKDPGSLTAQLN QRADAALSQAKGVSGVTAHTGAFSVYPSTDRDGKISAWRGRTEVALESRDFAAASKLAGQLSNLMQVANVEFSLSPEAQR AAEQKLTTEAIKSFRARADEAAKAFGYGSYTIRDVNVGGGRNVQPYPRMMAMAAAPMDSAKMSAPIAVEGGKATVSVTVN GSVQMK
Sequences:
>Translated_246_residues MTKKSALALSLALAAAVPVALTLASTTAHAQTANPHFPEPAGVLSLSSQASADVPQDIIHITLFYEQQAKDPGSLTAQLN QRADAALSQAKGVSGVTAHTGAFSVYPSTDRDGKISAWRGRTEVALESRDFAAASKLAGQLSNLMQVANVEFSLSPEAQR AAEQKLTTEAIKSFRARADEAAKAFGYGSYTIRDVNVGGGRNVQPYPRMMAMAAAPMDSAKMSAPIAVEGGKATVSVTVN GSVQMK >Mature_245_residues TKKSALALSLALAAAVPVALTLASTTAHAQTANPHFPEPAGVLSLSSQASADVPQDIIHITLFYEQQAKDPGSLTAQLNQ RADAALSQAKGVSGVTAHTGAFSVYPSTDRDGKISAWRGRTEVALESRDFAAASKLAGQLSNLMQVANVEFSLSPEAQRA AEQKLTTEAIKSFRARADEAAKAFGYGSYTIRDVNVGGGRNVQPYPRMMAMAAAPMDSAKMSAPIAVEGGKATVSVTVNG SVQMK
Specific function: Unknown
COG id: COG3471
COG function: function code S; Predicted periplasmic/secreted protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25608; Mature: 25477
Theoretical pI: Translated: 9.64; Mature: 9.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKKSALALSLALAAAVPVALTLASTTAHAQTANPHFPEPAGVLSLSSQASADVPQDIIH CCCHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCEEE ITLFYEQQAKDPGSLTAQLNQRADAALSQAKGVSGVTAHTGAFSVYPSTDRDGKISAWRG EEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCEEEECCCCCCCCCEEEECC RTEVALESRDFAAASKLAGQLSNLMQVANVEFSLSPEAQRAAEQKLTTEAIKSFRARADE CCEEEECCCCHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHH AAKAFGYGSYTIRDVNVGGGRNVQPYPRMMAMAAAPMDSAKMSAPIAVEGGKATVSVTVN HHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCCCHHCCCCEEEECCCEEEEEEEC GSVQMK CEEEEC >Mature Secondary Structure TKKSALALSLALAAAVPVALTLASTTAHAQTANPHFPEPAGVLSLSSQASADVPQDIIH CCHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCEEE ITLFYEQQAKDPGSLTAQLNQRADAALSQAKGVSGVTAHTGAFSVYPSTDRDGKISAWRG EEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCEEEECCCCCCCCCEEEECC RTEVALESRDFAAASKLAGQLSNLMQVANVEFSLSPEAQRAAEQKLTTEAIKSFRARADE CCEEEECCCCHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHH AAKAFGYGSYTIRDVNVGGGRNVQPYPRMMAMAAAPMDSAKMSAPIAVEGGKATVSVTVN HHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCCCHHCCCCEEEECCCEEEEEEEC GSVQMK CEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA