| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78067258
Identifier: 78067258
GI number: 78067258
Start: 2903439
End: 2903900
Strand: Direct
Name: 78067258
Synonym: Bcep18194_A5789
Alternate gene names: NA
Gene position: 2903439-2903900 (Clockwise)
Preceding gene: 78067257
Following gene: 78067259
Centisome position: 78.6
GC content: 63.2
Gene sequence:
>462_bases ATGCAATACTGGCTGATGAAGTCCGAACCGGACGAAGCAAGCATCGACGATCTCGCCAACGCACCGCAGCGCTCGCTGCC GTGGACCGGCGTGCGCAACTATCAGGCGCGCAATTTCATGCGCGACACGATGAAGATCGGCGACGGCGTGCTGTTCTATC ACTCGAGCTGCCCCGAGCCGGGCATCGCGGGCCTCGCCGAAGTGTCGTCGACGCCCTACCCCGACCCCACGCAGTTCGAT CCGAAAAGCCCCTATTACGACCCGAAGTCGACTCAGGAAGCACCGCGCTGGCTGCTCGTCGACGTGTGCTACGTGAAAAA ATCGCCACTCGTGCCGCTTGCGGCGCTGCGCGAACACGACGAACTCGCCGACATGCGCGTGCTCGCACGCGGCAACCGGC TGTCGATCACGCCGGTCACGCGCGCCGAATGGCGCTTCATCACCGAAAAGCTGATGAAGTAG
Upstream 100 bases:
>100_bases GCCGGCCTAGCGGCCAAGGCGGGGGCCTATCCAACGGCATCGGGCGAAGCCCGGTGCCGTTTTCTTTTGTAGCAGCCTCT TTCTGCGTCGATCACGATCC
Downstream 100 bases:
>100_bases GCGCACGCCAAAGGTCAAATCTGGTCAGTACGCACCGCCGCCACGGAACTCGCGGCACTTTCGCGCGGCCTAAGCAACCG CTGTCGGCCGATCAGGCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 153; Mature: 153
Protein sequence:
>153_residues MQYWLMKSEPDEASIDDLANAPQRSLPWTGVRNYQARNFMRDTMKIGDGVLFYHSSCPEPGIAGLAEVSSTPYPDPTQFD PKSPYYDPKSTQEAPRWLLVDVCYVKKSPLVPLAALREHDELADMRVLARGNRLSITPVTRAEWRFITEKLMK
Sequences:
>Translated_153_residues MQYWLMKSEPDEASIDDLANAPQRSLPWTGVRNYQARNFMRDTMKIGDGVLFYHSSCPEPGIAGLAEVSSTPYPDPTQFD PKSPYYDPKSTQEAPRWLLVDVCYVKKSPLVPLAALREHDELADMRVLARGNRLSITPVTRAEWRFITEKLMK >Mature_153_residues MQYWLMKSEPDEASIDDLANAPQRSLPWTGVRNYQARNFMRDTMKIGDGVLFYHSSCPEPGIAGLAEVSSTPYPDPTQFD PKSPYYDPKSTQEAPRWLLVDVCYVKKSPLVPLAALREHDELADMRVLARGNRLSITPVTRAEWRFITEKLMK
Specific function: Unknown
COG id: COG2947
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI83267861, Length=163, Percent_Identity=43.558282208589, Blast_Score=140, Evalue=3e-34, Organism=Homo sapiens, GI40806221, Length=163, Percent_Identity=43.558282208589, Blast_Score=140, Evalue=3e-34, Organism=Homo sapiens, GI7661804, Length=163, Percent_Identity=43.558282208589, Blast_Score=140, Evalue=3e-34, Organism=Homo sapiens, GI83267859, Length=106, Percent_Identity=49.0566037735849, Blast_Score=116, Evalue=1e-26, Organism=Homo sapiens, GI40806219, Length=106, Percent_Identity=49.0566037735849, Blast_Score=116, Evalue=1e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17491; Mature: 17491
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQYWLMKSEPDEASIDDLANAPQRSLPWTGVRNYQARNFMRDTMKIGDGVLFYHSSCPEP CCEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCC GIAGLAEVSSTPYPDPTQFDPKSPYYDPKSTQEAPRWLLVDVCYVKKSPLVPLAALREHD CCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHH ELADMRVLARGNRLSITPVTRAEWRFITEKLMK HHHHHHHHHCCCEEEECCCCHHHHHHHHHHHCC >Mature Secondary Structure MQYWLMKSEPDEASIDDLANAPQRSLPWTGVRNYQARNFMRDTMKIGDGVLFYHSSCPEP CCEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCC GIAGLAEVSSTPYPDPTQFDPKSPYYDPKSTQEAPRWLLVDVCYVKKSPLVPLAALREHD CCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHH ELADMRVLARGNRLSITPVTRAEWRFITEKLMK HHHHHHHHHCCCEEEECCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA