| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78067231
Identifier: 78067231
GI number: 78067231
Start: 2872790
End: 2873629
Strand: Reverse
Name: 78067231
Synonym: Bcep18194_A5762
Alternate gene names: NA
Gene position: 2873629-2872790 (Counterclockwise)
Preceding gene: 78067232
Following gene: 78067225
Centisome position: 77.79
GC content: 72.5
Gene sequence:
>840_bases ATGGCGACGCACGGACGAATCCGGGCGATGCGTGCGGCGTTGGCCGCGCTCGTCGTCTGGGCGGCAGGGTCGGCAGGGCT GGCGGGAGTCGGGGTCGCGCACGCGGAAGTCGCGGCGGCCGACCCGATCGACGTCGCGATGCGGCAATGCCTCGCGCGGC GCGACCGGTCCTCGCCGGCCGGCCAAATCCAGTGCATGGGTGAAGCGCAGCAGCAGTGGCAGGCCGTGATGGACGGCGCG TACCAGCGCCTGTTGAAGGATGCGCCCGCCGACGCGAAGCGCGGCTGGCAGGACAGCCAGCGCCATTGGCTCACGTGGCG CAAGGACGAAGTGCATCTGCTGAAGGCCGTGTACGACACGACGCGCGGGACGTCGTACGCGATGTCGAGCGCCGACCTGC AACTGCAGCCCGTGCGCGATCGCGCGCTGGCGCTGCGCAGTGCGGCCGATCGCTATGCGCCGCCGCCCGCTGCCGTGCCG GTCGCGGCCACGAGTGGTGCGCAGGGTGGCGCGAGCGATGCCCCGGGTGCGGCCCAGGGTGCGGCCAAACCGAACGCCAA GCCGGCGAATGCGCAGCGCGATCCGGCCGTGCGCCGCGTGCGGCCGTGCGAACAGGATGCCGCGTGCGAGCACGCGCTGT TCGACCTGAACCGCTATTACCAGAAGCTGCGCCGCAAGATGCCCGCGCATTCGGCCGCGACGCTCGTCCGTGCGCAGCGC GCGTGGGTCGGGTTCCGCGATGCGACGGCGCCGCTCGTCGGCGAGGACGGCCGCGTCGACCTGATCGGCGCGCGCATCGC GACGATGAAGCGGCTGTCGGAGACGGCCGGCAACAAGTAA
Upstream 100 bases:
>100_bases TCAACGAGCGTTTCCCGGGCTTCCACACCGACATCCACGGCCTCGTCGCGGAAGAGGTGAACGGCCGCGTCGAGTACTTC GTCGACTGCGTGCGCGACTG
Downstream 100 bases:
>100_bases GCGCAATCGCGTAGCCGATGGTTCGGCGACACGTCAAAAAGCAAAACGGGCACCCGAAGGTGCCCGTTTTTCATTTGGCG GCAGCGATTCATGCGGGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 279; Mature: 278
Protein sequence:
>279_residues MATHGRIRAMRAALAALVVWAAGSAGLAGVGVAHAEVAAADPIDVAMRQCLARRDRSSPAGQIQCMGEAQQQWQAVMDGA YQRLLKDAPADAKRGWQDSQRHWLTWRKDEVHLLKAVYDTTRGTSYAMSSADLQLQPVRDRALALRSAADRYAPPPAAVP VAATSGAQGGASDAPGAAQGAAKPNAKPANAQRDPAVRRVRPCEQDAACEHALFDLNRYYQKLRRKMPAHSAATLVRAQR AWVGFRDATAPLVGEDGRVDLIGARIATMKRLSETAGNK
Sequences:
>Translated_279_residues MATHGRIRAMRAALAALVVWAAGSAGLAGVGVAHAEVAAADPIDVAMRQCLARRDRSSPAGQIQCMGEAQQQWQAVMDGA YQRLLKDAPADAKRGWQDSQRHWLTWRKDEVHLLKAVYDTTRGTSYAMSSADLQLQPVRDRALALRSAADRYAPPPAAVP VAATSGAQGGASDAPGAAQGAAKPNAKPANAQRDPAVRRVRPCEQDAACEHALFDLNRYYQKLRRKMPAHSAATLVRAQR AWVGFRDATAPLVGEDGRVDLIGARIATMKRLSETAGNK >Mature_278_residues ATHGRIRAMRAALAALVVWAAGSAGLAGVGVAHAEVAAADPIDVAMRQCLARRDRSSPAGQIQCMGEAQQQWQAVMDGAY QRLLKDAPADAKRGWQDSQRHWLTWRKDEVHLLKAVYDTTRGTSYAMSSADLQLQPVRDRALALRSAADRYAPPPAAVPV AATSGAQGGASDAPGAAQGAAKPNAKPANAQRDPAVRRVRPCEQDAACEHALFDLNRYYQKLRRKMPAHSAATLVRAQRA WVGFRDATAPLVGEDGRVDLIGARIATMKRLSETAGNK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29890; Mature: 29759
Theoretical pI: Translated: 10.52; Mature: 10.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATHGRIRAMRAALAALVVWAAGSAGLAGVGVAHAEVAAADPIDVAMRQCLARRDRSSPA CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCCC GQIQCMGEAQQQWQAVMDGAYQRLLKDAPADAKRGWQDSQRHWLTWRKDEVHLLKAVYDT CEEEECHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCHHCCCCCCHHHHHHHHHHHH TRGTSYAMSSADLQLQPVRDRALALRSAADRYAPPPAAVPVAATSGAQGGASDAPGAAQG CCCCHHEECCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCC AAKPNAKPANAQRDPAVRRVRPCEQDAACEHALFDLNRYYQKLRRKMPAHSAATLVRAQR CCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH AWVGFRDATAPLVGEDGRVDLIGARIATMKRLSETAGNK HHCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHCCCC >Mature Secondary Structure ATHGRIRAMRAALAALVVWAAGSAGLAGVGVAHAEVAAADPIDVAMRQCLARRDRSSPA CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCCC GQIQCMGEAQQQWQAVMDGAYQRLLKDAPADAKRGWQDSQRHWLTWRKDEVHLLKAVYDT CEEEECHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCHHCCCCCCHHHHHHHHHHHH TRGTSYAMSSADLQLQPVRDRALALRSAADRYAPPPAAVPVAATSGAQGGASDAPGAAQG CCCCHHEECCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCC AAKPNAKPANAQRDPAVRRVRPCEQDAACEHALFDLNRYYQKLRRKMPAHSAATLVRAQR CCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH AWVGFRDATAPLVGEDGRVDLIGARIATMKRLSETAGNK HHCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA