Click here to switch to the map view.

The map label for this gene is ydiA [C]

Identifier: 78066782

GI number: 78066782

Start: 2365590

End: 2366405

Strand: Direct

Name: ydiA [C]

Synonym: Bcep18194_A5313

Alternate gene names: 78066782

Gene position: 2365590-2366405 (Clockwise)

Preceding gene: 78066778

Following gene: 78066799

Centisome position: 64.04

GC content: 63.11

Gene sequence:

>816_bases
ATGCTGCCTACCGTATTCATCGTCTCCGACGGCACCGGGATCACTGCCGAAACCTTCGCGCATTCGATCCTCTCCCAGTT
CGACCAGAAATTCCGTCTCGTGCGCGTGCCGTTCGTCGACTCGCTCGACAAGGCCTATGCGACCGTCGAGAAGATCAACG
AGGCCGCCGTGCACGACGGCCGCCGCGCGATCGTGTTCACGACGCTCGTCGACAGCGAGTCGAACGACATCGTCAAGCGC
TCCAACGCACTCGTGCTCGACATGTTCCAGCGCTTCGTCGAACCGCTCGAGCAGGAGCTCGAGCTCAAGTCGAGCCACGC
GATGGGCCGCGGCCACCAGAACGCGGATACCGAGGAATACAAGACCCGGATCGAGGCGATCAACTTCTCGCTCGCGCACG
ACGACGGCCAGTCGAACCGCAACCTGTCGGAAGCCGACGTGATCCTCGTCGGCGTGTCGCGCAGCGGCAAGACGCCGACG
AGCCTCTATCTCGCGATGCAGTACGGCGTGAAGGCAGCCAACTATCCGCTGATTCCGGAAGATTTCGAGCGCGGCAAGCT
GCCGTCGGCGCTCGCCGCGTACAGCGAGAAGCTGTTCGGGCTGTCGATCGACCCGCAGCGCCTGTCCGAGATCCGTAACG
AGCGCCGGCCGGGCAGCAAGTACGCGGCGCCCGAGAACTGTCGCTACGAGATCAACGAAGCCGAAGCGATGATGCGCCGC
GAGGGGATCAAGTGGTTGTCGTCGACGCACAAGTCGATCGAGGAAATCGCGACGACGATCCTGCAGGAAATCCGCCTCGA
CCGGCAGTCGTACTAA

Upstream 100 bases:

>100_bases
ACCGTGCCGGCTGCCGGATGTGGCGCGACCTTGTCACTGCGTCTGGAGGCGAACCTCCAGCCGCCCGCGCAACCGCCCTT
CACGTTCGACGCCCAGATTC

Downstream 100 bases:

>100_bases
GACTGGGCGCTGGCGGCCGCAGGGCCGCCGCCGGAAACAAAAAGGCCGCGTCGAACGCGGCCTTTTTCATGGTGCGGAGC
AAGACGCGTGCGGCGTCACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 271; Mature: 271

Protein sequence:

>271_residues
MLPTVFIVSDGTGITAETFAHSILSQFDQKFRLVRVPFVDSLDKAYATVEKINEAAVHDGRRAIVFTTLVDSESNDIVKR
SNALVLDMFQRFVEPLEQELELKSSHAMGRGHQNADTEEYKTRIEAINFSLAHDDGQSNRNLSEADVILVGVSRSGKTPT
SLYLAMQYGVKAANYPLIPEDFERGKLPSALAAYSEKLFGLSIDPQRLSEIRNERRPGSKYAAPENCRYEINEAEAMMRR
EGIKWLSSTHKSIEEIATTILQEIRLDRQSY

Sequences:

>Translated_271_residues
MLPTVFIVSDGTGITAETFAHSILSQFDQKFRLVRVPFVDSLDKAYATVEKINEAAVHDGRRAIVFTTLVDSESNDIVKR
SNALVLDMFQRFVEPLEQELELKSSHAMGRGHQNADTEEYKTRIEAINFSLAHDDGQSNRNLSEADVILVGVSRSGKTPT
SLYLAMQYGVKAANYPLIPEDFERGKLPSALAAYSEKLFGLSIDPQRLSEIRNERRPGSKYAAPENCRYEINEAEAMMRR
EGIKWLSSTHKSIEEIATTILQEIRLDRQSY
>Mature_271_residues
MLPTVFIVSDGTGITAETFAHSILSQFDQKFRLVRVPFVDSLDKAYATVEKINEAAVHDGRRAIVFTTLVDSESNDIVKR
SNALVLDMFQRFVEPLEQELELKSSHAMGRGHQNADTEEYKTRIEAINFSLAHDDGQSNRNLSEADVILVGVSRSGKTPT
SLYLAMQYGVKAANYPLIPEDFERGKLPSALAAYSEKLFGLSIDPQRLSEIRNERRPGSKYAAPENCRYEINEAEAMMRR
EGIKWLSSTHKSIEEIATTILQEIRLDRQSY

Specific function: Unknown

COG id: COG1806

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pyruvate, phosphate dikinase regulatory protein family [H]

Homologues:

Organism=Escherichia coli, GI1787995, Length=269, Percent_Identity=46.0966542750929, Blast_Score=247, Evalue=7e-67,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005177 [H]

Pfam domain/function: PF03618 DUF299 [H]

EC number: NA

Molecular weight: Translated: 30549; Mature: 30549

Theoretical pI: Translated: 5.45; Mature: 5.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPTVFIVSDGTGITAETFAHSILSQFDQKFRLVRVPFVDSLDKAYATVEKINEAAVHDG
CCCEEEEEECCCCCHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHCCC
RRAIVFTTLVDSESNDIVKRSNALVLDMFQRFVEPLEQELELKSSHAMGRGHQNADTEEY
CEEEEEEEEECCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
KTRIEAINFSLAHDDGQSNRNLSEADVILVGVSRSGKTPTSLYLAMQYGVKAANYPLIPE
HHHHHHHEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCHHHEEHHHHCCCCCCCCCCCC
DFERGKLPSALAAYSEKLFGLSIDPQRLSEIRNERRPGSKYAAPENCRYEINEAEAMMRR
HHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEHHHHHHHHHH
EGIKWLSSTHKSIEEIATTILQEIRLDRQSY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLPTVFIVSDGTGITAETFAHSILSQFDQKFRLVRVPFVDSLDKAYATVEKINEAAVHDG
CCCEEEEEECCCCCHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHCCC
RRAIVFTTLVDSESNDIVKRSNALVLDMFQRFVEPLEQELELKSSHAMGRGHQNADTEEY
CEEEEEEEEECCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
KTRIEAINFSLAHDDGQSNRNLSEADVILVGVSRSGKTPTSLYLAMQYGVKAANYPLIPE
HHHHHHHEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCHHHEEHHHHCCCCCCCCCCCC
DFERGKLPSALAAYSEKLFGLSIDPQRLSEIRNERRPGSKYAAPENCRYEINEAEAMMRR
HHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEHHHHHHHHHH
EGIKWLSSTHKSIEEIATTILQEIRLDRQSY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA