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The map label for this gene is ydiU [C]

Identifier: 78066678

GI number: 78066678

Start: 2257691

End: 2259313

Strand: Direct

Name: ydiU [C]

Synonym: Bcep18194_A5209

Alternate gene names: 78066678

Gene position: 2257691-2259313 (Clockwise)

Preceding gene: 78066672

Following gene: 78066679

Centisome position: 61.12

GC content: 67.84

Gene sequence:

>1623_bases
ATGCGGGCGGCGCGGCGCCGCCTTACAATATCGGCTTACCCAGAGGCGCTCAACATGTCGTTTTCCCGAAGCGCAGCCGA
TGCGGCTGACACCCTCCCCGACCTCGCCGCCACGCTCGGCGAGCCCGCCGTTGGCGCATTCGTCACGCTCGGCGACGCGT
TTCATACACGGCTGCCGGCCGCGCCGCTTGCGGCGCCGTACGTCGTCGGCTTTTCCGGCGAAGTCGCGCAACTGCTCGAC
CTGCCGCCGTCGATCGCCGCGCAGCCCGGCTTCGCCGAGCTGTTCGCCGGCAACCCGACGCGCGACTGGCCTGCCAACGC
GATGCCGTATGCATCGGTGTATTCCGGCCACCAGTTCGGCGTGTGGGCCGGCCAGCTCGGCGACGGCCGCGCGCTGACGA
TCGGCGAGCGCACCGGCACGGACGGCCGCCGCTACGAGCTGCAGCTGAAAGGCAGCGGCCGCACGCCGTATTCGCGGATG
GGCGACGGCCGCGCGGTGCTGCGCTCGTCGATCCGCGAATTCCTGTGCTCGGAAGCGATGCATCACCTCGGCATCCCGAC
CACGCGCGCACTGACGGTGATCGGTTCCGACCAGCCGGTGGTGCGCGAAGAGATCGAGACGTCGGCCGTCGTCACGCGCG
TGTCGGAGAGCTTCGTGCGCTTCGGCCACTTCGAGCACTTCTTCTCGAACGATCGCCCCGACCTGCTGCGCCAGCTCGCC
GATCACGTGATCGACCGCTTCTATCCGGAGTGCCGCCGCGCCGACGATCCGTACCTCGCGCTGCTCGAAGCCGCGACGCT
GCGCACGGCCGATCTCGTCGCGCAGTGGCAGGCCGTCGGCTTCTGTCATGGCGTGATGAACACCGACAACATGTCGATCC
TCGGCGTGACGATCGACTACGGCCCGTTCGGCTTCGTCGATGCGTTCGACGCGAACCACATCTGCAACCACTCGGATACG
AGCGGCCGCTACGCCTACCGGATGCAGCCGCGCATCGCGCACTGGAACTGCTATTGCCTCGCGCAGGCGCTGCTGCCGCT
GATCGGCCTGCAGCACGGCATCGACGACGACGATGCGCGCGCCGAACGTGCAGTGGAGGATGCGCAGGCCGTGCTCGCGA
AGTTCCCGGAACGGTTCGGCCCCGCGCTCGAACGTGCGATGCGCGCGAAGCTCGGCCTCGAGCTCGAACGCGAGAGCGAT
GCCGAGCTCGCCAACAAGCTGCTCGAGACGATGCATGCGAGCCATGCGGATTTCACGCTGACGTTCCGCCGGCTCGCGCA
GATCTCGAAGCACGACGCGAGCCGCGACGCACCCGTGCGCGACCTGTTCATCGACCGCGACGCGTTCGATGCGTGGGCGA
ACCTCTACCGCGCGCGCCTGTCCGAGGAAACGCGCGACGATGCGGCACGTGCAGCCGCGATGAACCGCGTGAACCCGAAA
TACGTGTTGCGCAACCATCTCGCCGAAGTCGCGATCCGGCGCGCAAAGGAAAAGGATTTTTCGGAAGTCGAGCGGCTCGC
GCAGATTCTGCGTCGGCCGTTCGACGAACAACCGGAGCATGAAGCGTACGCGGCGTTGCCGCCCGACTGGGCCGGGTCGC
TCGAAGTGAGCTGCTCGTCCTGA

Upstream 100 bases:

>100_bases
TTACCCATCGTCTTGTTCTCCGTGAGGATGCGAATCGGTGCCTCTGCGGCGCGCCCGTCAGCGGCCCCGGACGGGCGTGG
CGCACGGTGCGCGCGCCACC

Downstream 100 bases:

>100_bases
GCCCCAACCCGCGCGTATCGACCGACCGATCAGGAGAACCCCACATGTCCCACGATTCCGACGACAAGACCTTCCCGTAC
GAGAAGGACGACGCCGAGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 540; Mature: 540

Protein sequence:

>540_residues
MRAARRRLTISAYPEALNMSFSRSAADAADTLPDLAATLGEPAVGAFVTLGDAFHTRLPAAPLAAPYVVGFSGEVAQLLD
LPPSIAAQPGFAELFAGNPTRDWPANAMPYASVYSGHQFGVWAGQLGDGRALTIGERTGTDGRRYELQLKGSGRTPYSRM
GDGRAVLRSSIREFLCSEAMHHLGIPTTRALTVIGSDQPVVREEIETSAVVTRVSESFVRFGHFEHFFSNDRPDLLRQLA
DHVIDRFYPECRRADDPYLALLEAATLRTADLVAQWQAVGFCHGVMNTDNMSILGVTIDYGPFGFVDAFDANHICNHSDT
SGRYAYRMQPRIAHWNCYCLAQALLPLIGLQHGIDDDDARAERAVEDAQAVLAKFPERFGPALERAMRAKLGLELERESD
AELANKLLETMHASHADFTLTFRRLAQISKHDASRDAPVRDLFIDRDAFDAWANLYRARLSEETRDDAARAAAMNRVNPK
YVLRNHLAEVAIRRAKEKDFSEVERLAQILRRPFDEQPEHEAYAALPPDWAGSLEVSCSS

Sequences:

>Translated_540_residues
MRAARRRLTISAYPEALNMSFSRSAADAADTLPDLAATLGEPAVGAFVTLGDAFHTRLPAAPLAAPYVVGFSGEVAQLLD
LPPSIAAQPGFAELFAGNPTRDWPANAMPYASVYSGHQFGVWAGQLGDGRALTIGERTGTDGRRYELQLKGSGRTPYSRM
GDGRAVLRSSIREFLCSEAMHHLGIPTTRALTVIGSDQPVVREEIETSAVVTRVSESFVRFGHFEHFFSNDRPDLLRQLA
DHVIDRFYPECRRADDPYLALLEAATLRTADLVAQWQAVGFCHGVMNTDNMSILGVTIDYGPFGFVDAFDANHICNHSDT
SGRYAYRMQPRIAHWNCYCLAQALLPLIGLQHGIDDDDARAERAVEDAQAVLAKFPERFGPALERAMRAKLGLELERESD
AELANKLLETMHASHADFTLTFRRLAQISKHDASRDAPVRDLFIDRDAFDAWANLYRARLSEETRDDAARAAAMNRVNPK
YVLRNHLAEVAIRRAKEKDFSEVERLAQILRRPFDEQPEHEAYAALPPDWAGSLEVSCSS
>Mature_540_residues
MRAARRRLTISAYPEALNMSFSRSAADAADTLPDLAATLGEPAVGAFVTLGDAFHTRLPAAPLAAPYVVGFSGEVAQLLD
LPPSIAAQPGFAELFAGNPTRDWPANAMPYASVYSGHQFGVWAGQLGDGRALTIGERTGTDGRRYELQLKGSGRTPYSRM
GDGRAVLRSSIREFLCSEAMHHLGIPTTRALTVIGSDQPVVREEIETSAVVTRVSESFVRFGHFEHFFSNDRPDLLRQLA
DHVIDRFYPECRRADDPYLALLEAATLRTADLVAQWQAVGFCHGVMNTDNMSILGVTIDYGPFGFVDAFDANHICNHSDT
SGRYAYRMQPRIAHWNCYCLAQALLPLIGLQHGIDDDDARAERAVEDAQAVLAKFPERFGPALERAMRAKLGLELERESD
AELANKLLETMHASHADFTLTFRRLAQISKHDASRDAPVRDLFIDRDAFDAWANLYRARLSEETRDDAARAAAMNRVNPK
YVLRNHLAEVAIRRAKEKDFSEVERLAQILRRPFDEQPEHEAYAALPPDWAGSLEVSCSS

Specific function: Unknown

COG id: COG0397

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0061 (SELO) family [H]

Homologues:

Organism=Homo sapiens, GI32880229, Length=486, Percent_Identity=42.5925925925926, Blast_Score=316, Evalue=3e-86,
Organism=Escherichia coli, GI1787999, Length=491, Percent_Identity=46.2321792260692, Blast_Score=421, Evalue=1e-119,
Organism=Saccharomyces cerevisiae, GI6325034, Length=351, Percent_Identity=35.6125356125356, Blast_Score=199, Evalue=1e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003846 [H]

Pfam domain/function: PF02696 UPF0061 [H]

EC number: NA

Molecular weight: Translated: 59817; Mature: 59817

Theoretical pI: Translated: 5.84; Mature: 5.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAARRRLTISAYPEALNMSFSRSAADAADTLPDLAATLGEPAVGAFVTLGDAFHTRLPA
CCCCHHCCEEEECCHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHEEECHHHHHCCCC
APLAAPYVVGFSGEVAQLLDLPPSIAAQPGFAELFAGNPTRDWPANAMPYASVYSGHQFG
CCCCCCEEECCCCHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHCCCCCC
VWAGQLGDGRALTIGERTGTDGRRYELQLKGSGRTPYSRMGDGRAVLRSSIREFLCSEAM
EEECCCCCCCEEEECCCCCCCCCEEEEEEECCCCCCHHHCCCCHHHHHHHHHHHHHHHHH
HHLGIPTTRALTVIGSDQPVVREEIETSAVVTRVSESFVRFGHFEHFFSNDRPDLLRQLA
HHCCCCCHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
DHVIDRFYPECRRADDPYLALLEAATLRTADLVAQWQAVGFCHGVMNTDNMSILGVTIDY
HHHHHHHCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEC
GPFGFVDAFDANHICNHSDTSGRYAYRMQPRIAHWNCYCLAQALLPLIGLQHGIDDDDAR
CCCCCEECCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHH
AERAVEDAQAVLAKFPERFGPALERAMRAKLGLELERESDAELANKLLETMHASHADFTL
HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCEECCCCHHHHHHHHHHHHHCCCCCHHH
TFRRLAQISKHDASRDAPVRDLFIDRDAFDAWANLYRARLSEETRDDAARAAAMNRVNPK
HHHHHHHHHHHCCCCCCCHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
YVLRNHLAEVAIRRAKEKDFSEVERLAQILRRPFDEQPEHEAYAALPPDWAGSLEVSCSS
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCEEEEECC
>Mature Secondary Structure
MRAARRRLTISAYPEALNMSFSRSAADAADTLPDLAATLGEPAVGAFVTLGDAFHTRLPA
CCCCHHCCEEEECCHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHEEECHHHHHCCCC
APLAAPYVVGFSGEVAQLLDLPPSIAAQPGFAELFAGNPTRDWPANAMPYASVYSGHQFG
CCCCCCEEECCCCHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHCCCCCC
VWAGQLGDGRALTIGERTGTDGRRYELQLKGSGRTPYSRMGDGRAVLRSSIREFLCSEAM
EEECCCCCCCEEEECCCCCCCCCEEEEEEECCCCCCHHHCCCCHHHHHHHHHHHHHHHHH
HHLGIPTTRALTVIGSDQPVVREEIETSAVVTRVSESFVRFGHFEHFFSNDRPDLLRQLA
HHCCCCCHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
DHVIDRFYPECRRADDPYLALLEAATLRTADLVAQWQAVGFCHGVMNTDNMSILGVTIDY
HHHHHHHCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEC
GPFGFVDAFDANHICNHSDTSGRYAYRMQPRIAHWNCYCLAQALLPLIGLQHGIDDDDAR
CCCCCEECCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHH
AERAVEDAQAVLAKFPERFGPALERAMRAKLGLELERESDAELANKLLETMHASHADFTL
HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCEECCCCHHHHHHHHHHHHHCCCCCHHH
TFRRLAQISKHDASRDAPVRDLFIDRDAFDAWANLYRARLSEETRDDAARAAAMNRVNPK
HHHHHHHHHHHCCCCCCCHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
YVLRNHLAEVAIRRAKEKDFSEVERLAQILRRPFDEQPEHEAYAALPPDWAGSLEVSCSS
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA