| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78066266
Identifier: 78066266
GI number: 78066266
Start: 1810094
End: 1811164
Strand: Reverse
Name: 78066266
Synonym: Bcep18194_A4796
Alternate gene names: NA
Gene position: 1811164-1810094 (Counterclockwise)
Preceding gene: 78066269
Following gene: 78066265
Centisome position: 49.03
GC content: 70.31
Gene sequence:
>1071_bases ATGCCCGCTAACCCCTCCCTCTCCGTGTCGGAACAGCACGTGCTCGACGAAGCCTGTGCCGCGTTCGAAAGCGCGACCCG GCGCTTTCGCGCTCGGCCGGTGCGCGTGCCGGCCGCCTGCCAGGGGCGCGCCGACGCCATGATCCGCTTCGACGTTGCCG GGCAGGCATTCGAGATGCCGGTCGCCGTGAGCCTGCGCGTCGAATCGCTGGCGGGCGCGCTGGCGGAATTGCGCCGCCGT GGCGGCACCGCGGTGCCCGGCGAACGGCCGCTGATGCTGGTCGCACCGCATCTTTCGGCGGAACTGGCCGCCGGCCTGAC CGACCAGGGCATCCCGTTTCTCGATACCGCCGGCAACGCATGCCTGATTCAGCCGGAAGCAACCGTGATGATCGCGGGCC GGCCGAAGCCCGCCCGCACACCGCGCCGACAGGCATCGCGCGCGACGACGCCGAAGGGGCTGGCCGTGATGTTCGCACTC GCGACGCAGCCGGGCTTGGTCGCACAACCGTACCGGGCGATCGCCGCCGCGTCGGACGTCGCGCTCGGTACGGTCAATCT CGCGATGGACGATCTGATCGCGCGCGGCCTCGTCGGGCAGCGCCGCAACGGCGAGCGCCTGATGCCCGACTGGCCGCGCT TCGTGCAGGAATGGGTCGCGCTCTACCCGAGCCGCTTGCGCGCGAAACTGCCGAGCCGCCGGTTTGCCAGCCTCGCGCCC GACTGGTGGCGCGGCTTCGATTTCGCGGCATTCGATGCGCGGCTCGGCGGCGAGCCGGCAGCCGACCTGCTGACGCACGA CCTGAAACCGGCCACGATCACCGTCTATACGCACAGCACCGCGTCGAACCGGCTACTGCTCCAGGGCCGCCTGCGTCCGG ACGAGCGCGGCGATGTCGAGATCGTCGAAGCGTTCTGGCCACGGTCGGCGGAGTCTGGCTGGCGCGAGCAGGAAGTACCG ATCGTGCCGCCGCTGCTGATCTACGCGGATCTCGTCGCGTCCGGCGACAGTCGCAATCTCTCCATCGCCGATCGTATCCA TGACCGATACCTCGCCCATCCGCCCGCTTGA
Upstream 100 bases:
>100_bases TAGTGCCTATGCATCAATATCTTGCGAATACTTGTTCACTTTTTGACGCTTGTACATTTTTTGTGTACGCTGATAAAAAG TGAACGCACGATTCCCCTTG
Downstream 100 bases:
>100_bases GGTCGACGCGCGCCGGCCGCTGGAGCCCGCGGCGGTTGCGCTGCTGCAGGCCGTCGGCTCGGCCTGCGCGCGCCTCGACG CGGCGTTCGTGGTGGCCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 356; Mature: 355
Protein sequence:
>356_residues MPANPSLSVSEQHVLDEACAAFESATRRFRARPVRVPAACQGRADAMIRFDVAGQAFEMPVAVSLRVESLAGALAELRRR GGTAVPGERPLMLVAPHLSAELAAGLTDQGIPFLDTAGNACLIQPEATVMIAGRPKPARTPRRQASRATTPKGLAVMFAL ATQPGLVAQPYRAIAAASDVALGTVNLAMDDLIARGLVGQRRNGERLMPDWPRFVQEWVALYPSRLRAKLPSRRFASLAP DWWRGFDFAAFDARLGGEPAADLLTHDLKPATITVYTHSTASNRLLLQGRLRPDERGDVEIVEAFWPRSAESGWREQEVP IVPPLLIYADLVASGDSRNLSIADRIHDRYLAHPPA
Sequences:
>Translated_356_residues MPANPSLSVSEQHVLDEACAAFESATRRFRARPVRVPAACQGRADAMIRFDVAGQAFEMPVAVSLRVESLAGALAELRRR GGTAVPGERPLMLVAPHLSAELAAGLTDQGIPFLDTAGNACLIQPEATVMIAGRPKPARTPRRQASRATTPKGLAVMFAL ATQPGLVAQPYRAIAAASDVALGTVNLAMDDLIARGLVGQRRNGERLMPDWPRFVQEWVALYPSRLRAKLPSRRFASLAP DWWRGFDFAAFDARLGGEPAADLLTHDLKPATITVYTHSTASNRLLLQGRLRPDERGDVEIVEAFWPRSAESGWREQEVP IVPPLLIYADLVASGDSRNLSIADRIHDRYLAHPPA >Mature_355_residues PANPSLSVSEQHVLDEACAAFESATRRFRARPVRVPAACQGRADAMIRFDVAGQAFEMPVAVSLRVESLAGALAELRRRG GTAVPGERPLMLVAPHLSAELAAGLTDQGIPFLDTAGNACLIQPEATVMIAGRPKPARTPRRQASRATTPKGLAVMFALA TQPGLVAQPYRAIAAASDVALGTVNLAMDDLIARGLVGQRRNGERLMPDWPRFVQEWVALYPSRLRAKLPSRRFASLAPD WWRGFDFAAFDARLGGEPAADLLTHDLKPATITVYTHSTASNRLLLQGRLRPDERGDVEIVEAFWPRSAESGWREQEVPI VPPLLIYADLVASGDSRNLSIADRIHDRYLAHPPA
Specific function: Unknown
COG id: COG4861
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38681; Mature: 38550
Theoretical pI: Translated: 9.21; Mature: 9.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPANPSLSVSEQHVLDEACAAFESATRRFRARPVRVPAACQGRADAMIRFDVAGQAFEMP CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCEECCC VAVSLRVESLAGALAELRRRGGTAVPGERPLMLVAPHLSAELAAGLTDQGIPFLDTAGNA EEEEEEHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCHHHHHCCCCCCCCCEEECCCCE CLIQPEATVMIAGRPKPARTPRRQASRATTPKGLAVMFALATQPGLVAQPYRAIAAASDV EEECCCCEEEEECCCCCCCCCHHHHHCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHCCH ALGTVNLAMDDLIARGLVGQRRNGERLMPDWPRFVQEWVALYPSRLRAKLPSRRFASLAP HEEEHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHCCCHHHHHCCC DWWRGFDFAAFDARLGGEPAADLLTHDLKPATITVYTHSTASNRLLLQGRLRPDERGDVE HHHCCCCEEEEHHHCCCCCHHHHHHCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCEE IVEAFWPRSAESGWREQEVPIVPPLLIYADLVASGDSRNLSIADRIHDRYLAHPPA EEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCC >Mature Secondary Structure PANPSLSVSEQHVLDEACAAFESATRRFRARPVRVPAACQGRADAMIRFDVAGQAFEMP CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCEECCC VAVSLRVESLAGALAELRRRGGTAVPGERPLMLVAPHLSAELAAGLTDQGIPFLDTAGNA EEEEEEHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCHHHHHCCCCCCCCCEEECCCCE CLIQPEATVMIAGRPKPARTPRRQASRATTPKGLAVMFALATQPGLVAQPYRAIAAASDV EEECCCCEEEEECCCCCCCCCHHHHHCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHCCH ALGTVNLAMDDLIARGLVGQRRNGERLMPDWPRFVQEWVALYPSRLRAKLPSRRFASLAP HEEEHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHCCCHHHHHCCC DWWRGFDFAAFDARLGGEPAADLLTHDLKPATITVYTHSTASNRLLLQGRLRPDERGDVE HHHCCCCEEEEHHHCCCCCHHHHHHCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCEE IVEAFWPRSAESGWREQEVPIVPPLLIYADLVASGDSRNLSIADRIHDRYLAHPPA EEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA