| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78066265
Identifier: 78066265
GI number: 78066265
Start: 1809220
End: 1810125
Strand: Reverse
Name: 78066265
Synonym: Bcep18194_A4795
Alternate gene names: NA
Gene position: 1810125-1809220 (Counterclockwise)
Preceding gene: 78066266
Following gene: 78066255
Centisome position: 49.0
GC content: 67.22
Gene sequence:
>906_bases ATGACCGATACCTCGCCCATCCGCCCGCTTGAGGTCGACGCGCGCCGGCCGCTGGAGCCCGCGGCGGTTGCGCTGCTGCA GGCCGTCGGCTCGGCCTGCGCGCGCCTCGACGCGGCGTTCGTGGTGGCCGGCGCCACTGCGCGCGACATCCTGATGTGGC ACGTGCACGGCATCCGGCCAGTGCGTGCGACGAGAGATGTCGACGTTGCAGTGTGTGCGGTGAGCTGGCCATTTCACGCA CAACTCGTCGAGGCACTCGTCGCAACCGGGCAGTTCACGCGCGCATCGAAACAGCAGCAGAAACTGCTGTTCGAAAGCGG CGCTCACGGCTTTCGCACGGAGCTGGATCTCGTGCCGTTCGGGCCGCTCGAAACGCCACCGGGAGAGATCGCGTGGCCGC CCGGCGGCGATTTCGTGCTGAACGTGCTCGGGTTTCAGGAAGCAGTGGACACCGCACAGCCCGTGTCGATAGACGCGCAC ACCGTGGTGCCGGTGGCCAGCCTGCCGGCACTGGCGCTGCTGAAGCTGCTCGCCTGGAAGGACCGGCGTGCGCGCCAGAA CAGCGACGCATACGACCTGCTGTTCCTGCTGCGGAATTTTCACGACGCCGGCAATCGCGAACGTATCTGGGATGCCGCGC CGGACCTGCTCGAAATGCACGCGTTCCAGCCGGGCCTCGCCGCTGCCGCGCTGCTCGCACGAGAGGCGAAACGCATTGCT TCGCCGCCAACACGCGATGCGATCCGTGCGCTGTTGTCGGACGAGGCGACTTATGCCGCGCTCGGCCAGGATCTGCTGGC ACGCGCGTTCTCGTTGCTGCCCGGTGAATTCAGCGACGACGTCGACCGGTATCTCGACGCGTTCCGTCACGCCTTTCTCG TTGACGAACCCGCGCCGCGTGCTTGA
Upstream 100 bases:
>100_bases TGGCGCGAGCAGGAAGTACCGATCGTGCCGCCGCTGCTGATCTACGCGGATCTCGTCGCGTCCGGCGACAGTCGCAATCT CTCCATCGCCGATCGTATCC
Downstream 100 bases:
>100_bases CGCGCCGCTGTGAAACAGCAGCGCGATCGTGTCGATGCCCGGCCGCGCTCAGACCGCCCAGTCTTCGAGCGACAATCCGG CGACACGGCCGAACTCGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 301; Mature: 300
Protein sequence:
>301_residues MTDTSPIRPLEVDARRPLEPAAVALLQAVGSACARLDAAFVVAGATARDILMWHVHGIRPVRATRDVDVAVCAVSWPFHA QLVEALVATGQFTRASKQQQKLLFESGAHGFRTELDLVPFGPLETPPGEIAWPPGGDFVLNVLGFQEAVDTAQPVSIDAH TVVPVASLPALALLKLLAWKDRRARQNSDAYDLLFLLRNFHDAGNRERIWDAAPDLLEMHAFQPGLAAAALLAREAKRIA SPPTRDAIRALLSDEATYAALGQDLLARAFSLLPGEFSDDVDRYLDAFRHAFLVDEPAPRA
Sequences:
>Translated_301_residues MTDTSPIRPLEVDARRPLEPAAVALLQAVGSACARLDAAFVVAGATARDILMWHVHGIRPVRATRDVDVAVCAVSWPFHA QLVEALVATGQFTRASKQQQKLLFESGAHGFRTELDLVPFGPLETPPGEIAWPPGGDFVLNVLGFQEAVDTAQPVSIDAH TVVPVASLPALALLKLLAWKDRRARQNSDAYDLLFLLRNFHDAGNRERIWDAAPDLLEMHAFQPGLAAAALLAREAKRIA SPPTRDAIRALLSDEATYAALGQDLLARAFSLLPGEFSDDVDRYLDAFRHAFLVDEPAPRA >Mature_300_residues TDTSPIRPLEVDARRPLEPAAVALLQAVGSACARLDAAFVVAGATARDILMWHVHGIRPVRATRDVDVAVCAVSWPFHAQ LVEALVATGQFTRASKQQQKLLFESGAHGFRTELDLVPFGPLETPPGEIAWPPGGDFVLNVLGFQEAVDTAQPVSIDAHT VVPVASLPALALLKLLAWKDRRARQNSDAYDLLFLLRNFHDAGNRERIWDAAPDLLEMHAFQPGLAAAALLAREAKRIAS PPTRDAIRALLSDEATYAALGQDLLARAFSLLPGEFSDDVDRYLDAFRHAFLVDEPAPRA
Specific function: Unknown
COG id: COG4849
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32714; Mature: 32582
Theoretical pI: Translated: 5.36; Mature: 5.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDTSPIRPLEVDARRPLEPAAVALLQAVGSACARLDAAFVVAGATARDILMWHVHGIRP CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHCCCCC VRATRDVDVAVCAVSWPFHAQLVEALVATGQFTRASKQQQKLLFESGAHGFRTELDLVPF CCCCCCCCEEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEECEECC GPLETPPGEIAWPPGGDFVLNVLGFQEAVDTAQPVSIDAHTVVPVASLPALALLKLLAWK CCCCCCCCCEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH DRRARQNSDAYDLLFLLRNFHDAGNRERIWDAAPDLLEMHAFQPGLAAAALLAREAKRIA HHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHC SPPTRDAIRALLSDEATYAALGQDLLARAFSLLPGEFSDDVDRYLDAFRHAFLVDEPAPR CCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCC A C >Mature Secondary Structure TDTSPIRPLEVDARRPLEPAAVALLQAVGSACARLDAAFVVAGATARDILMWHVHGIRP CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHCCCCC VRATRDVDVAVCAVSWPFHAQLVEALVATGQFTRASKQQQKLLFESGAHGFRTELDLVPF CCCCCCCCEEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEECEECC GPLETPPGEIAWPPGGDFVLNVLGFQEAVDTAQPVSIDAHTVVPVASLPALALLKLLAWK CCCCCCCCCEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH DRRARQNSDAYDLLFLLRNFHDAGNRERIWDAAPDLLEMHAFQPGLAAAALLAREAKRIA HHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHC SPPTRDAIRALLSDEATYAALGQDLLARAFSLLPGEFSDDVDRYLDAFRHAFLVDEPAPR CCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCC A C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA