| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is marR [C]
Identifier: 78066117
GI number: 78066117
Start: 1632554
End: 1633045
Strand: Reverse
Name: marR [C]
Synonym: Bcep18194_A4647
Alternate gene names: 78066117
Gene position: 1633045-1632554 (Counterclockwise)
Preceding gene: 78066124
Following gene: 78066116
Centisome position: 44.21
GC content: 64.23
Gene sequence:
>492_bases ATGTCGGATTCTTCTACCCAACCACCCGTCTCGCCGCTGTCTTCGTATCAGATGAACGACAGCGTCGGTTATCTGATGTC GCGCGTGAAGTCGGTGATGACCAACCTCGTCACGCAACGCACGCAGGAAGAGCTCGGCATCACGGGTACGCAGGCCAGCA TGCTGTTCATGATCGCGGTCGGCAAGTGCTCGACGGCCGCCGAGCTCGCGCGCGAGTACGGGATCGACGCAAGCGCGGTC ACGCGCCTGCTCGACCGGGTCGAGAAACGCGGCCTGCTGTCCCGCGTCCGCAGCATCGAGGACCGGCGCGTCGTGCGCCT CGAGCTGACCGACGAAGGCCGTGCGCTCGCCGAACGGCTGCCGCCGATTTTCCGCAGTGTGCTCGACCAGGTACTGGACG GGTTTACGCCGGAAGAAGTCGGGTTCCTGAAGAGCATGCTGCGCCGCATTCTCAGCAACTACTGCGAGACCGCCGGCGGC AGCATCACGTAA
Upstream 100 bases:
>100_bases GGGACACAAAGCGCGCCCTTTGCCGTTCGATTAACATTTGCCGCGGCAAGCAACTGTGCCTATACTGCTGCCTAGTCAAC TATTGCAGCTTCAGGGTTTT
Downstream 100 bases:
>100_bases TAGTTGCCATAACAATTACTTTTGACAGATTAATGTAAGGAAATCCTTGCAGTGTCCATCATTCATTCCGAGTCAGGGAT CAGCGCGATGAAATCCTCCC
Product: MarR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator MarR Family; Regulatory Protein MarR; Transcriptional Regulator; Transcriptional Regulator MarR Family Protein; Transcription Regulator Protein; Multiple Antibiotic Resistance Protein MarR; Multiple Antibiotic Resistance Protein; MarR Transcriptional Regulator; Selenocysteine-Containing Oxidoreductase Fusion Protein; Transcriptional Regulators; Transcriptional Regulator Protein MarR Family; Transcriptional Regulator Protein; Transcription Regulator; Multiple Antibiotic Resistance Operon Repressor MarR; Transcriptional Regulator Marr Family; MarR Family Regulatory Helix-Turn-Helix
Number of amino acids: Translated: 163; Mature: 162
Protein sequence:
>163_residues MSDSSTQPPVSPLSSYQMNDSVGYLMSRVKSVMTNLVTQRTQEELGITGTQASMLFMIAVGKCSTAAELAREYGIDASAV TRLLDRVEKRGLLSRVRSIEDRRVVRLELTDEGRALAERLPPIFRSVLDQVLDGFTPEEVGFLKSMLRRILSNYCETAGG SIT
Sequences:
>Translated_163_residues MSDSSTQPPVSPLSSYQMNDSVGYLMSRVKSVMTNLVTQRTQEELGITGTQASMLFMIAVGKCSTAAELAREYGIDASAV TRLLDRVEKRGLLSRVRSIEDRRVVRLELTDEGRALAERLPPIFRSVLDQVLDGFTPEEVGFLKSMLRRILSNYCETAGG SIT >Mature_162_residues SDSSTQPPVSPLSSYQMNDSVGYLMSRVKSVMTNLVTQRTQEELGITGTQASMLFMIAVGKCSTAAELAREYGIDASAVT RLLDRVEKRGLLSRVRSIEDRRVVRLELTDEGRALAERLPPIFRSVLDQVLDGFTPEEVGFLKSMLRRILSNYCETAGGS IT
Specific function: Repressor Of The Marrab Operon Which Is Involved In The Activation Of Both Antibiotic Resistance And Oxidative Stress Genes. Binds To The Maro Operator/Promoter Site. [C]
COG id: COG1846
COG function: function code K; Transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18009; Mature: 17878
Theoretical pI: Translated: 6.69; Mature: 6.69
Prosite motif: PS50995 HTH_MARR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDSSTQPPVSPLSSYQMNDSVGYLMSRVKSVMTNLVTQRTQEELGITGTQASMLFMIAV CCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH GKCSTAAELAREYGIDASAVTRLLDRVEKRGLLSRVRSIEDRRVVRLELTDEGRALAERL CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHC PPIFRSVLDQVLDGFTPEEVGFLKSMLRRILSNYCETAGGSIT CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure SDSSTQPPVSPLSSYQMNDSVGYLMSRVKSVMTNLVTQRTQEELGITGTQASMLFMIAV CCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH GKCSTAAELAREYGIDASAVTRLLDRVEKRGLLSRVRSIEDRRVVRLELTDEGRALAERL CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHC PPIFRSVLDQVLDGFTPEEVGFLKSMLRRILSNYCETAGGSIT CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA